Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20883 and SM_b20884 are separated by 42 nucleotides SM_b20884 and SM_b20885 are separated by 48 nucleotides SM_b20885 and SM_b20886 are separated by 374 nucleotides
SM_b20883: SM_b20883 - hypothetical protein, at 1,289,174 to 1,289,641
_b20883
SM_b20884: SM_b20884 - hypothetical protein, at 1,289,684 to 1,290,118
_b20884
SM_b20885: SM_b20885 - hypothetical protein, at 1,290,167 to 1,291,087
_b20885
SM_b20886: SM_b20886 - hypothetical protein, at 1,291,462 to 1,292,871
_b20886
Position (kb)
1290
1291
1292 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1289.261 kb on + strand, within SM_b20883 at 1289.557 kb on + strand, within SM_b20883 at 1289.557 kb on + strand, within SM_b20883 at 1290.058 kb on + strand, within SM_b20884 at 1290.059 kb on - strand, within SM_b20884 at 1290.158 kb on + strand at 1290.158 kb on + strand at 1290.158 kb on + strand at 1290.237 kb on + strand at 1290.237 kb on + strand at 1290.237 kb on + strand at 1290.238 kb on - strand at 1290.238 kb on - strand at 1290.257 kb on + strand at 1290.257 kb on + strand at 1290.258 kb on - strand at 1290.340 kb on - strand, within SM_b20885 at 1290.340 kb on - strand, within SM_b20885 at 1290.384 kb on + strand, within SM_b20885 at 1290.384 kb on + strand, within SM_b20885 at 1290.385 kb on - strand, within SM_b20885 at 1290.385 kb on - strand, within SM_b20885 at 1290.454 kb on + strand, within SM_b20885 at 1290.522 kb on + strand, within SM_b20885 at 1290.522 kb on + strand, within SM_b20885 at 1290.523 kb on - strand, within SM_b20885 at 1290.523 kb on - strand, within SM_b20885 at 1290.523 kb on - strand, within SM_b20885 at 1290.523 kb on - strand, within SM_b20885 at 1290.523 kb on - strand, within SM_b20885 at 1290.523 kb on - strand, within SM_b20885 at 1290.564 kb on + strand, within SM_b20885 at 1290.588 kb on + strand, within SM_b20885 at 1290.712 kb on + strand, within SM_b20885 at 1290.846 kb on - strand, within SM_b20885 at 1290.858 kb on + strand at 1290.858 kb on + strand, within SM_b20885 at 1290.859 kb on - strand, within SM_b20885 at 1290.859 kb on - strand, within SM_b20885 at 1290.976 kb on - strand, within SM_b20885 at 1290.976 kb on - strand, within SM_b20885 at 1291.020 kb on + strand at 1291.148 kb on - strand at 1291.191 kb on - strand at 1291.204 kb on - strand at 1291.249 kb on + strand at 1291.250 kb on - strand at 1291.347 kb on - strand at 1291.430 kb on - strand at 1291.447 kb on + strand at 1291.511 kb on - strand at 1291.531 kb on + strand at 1291.532 kb on - strand at 1291.532 kb on - strand at 1291.532 kb on - strand at 1291.532 kb on - strand at 1291.619 kb on - strand, within SM_b20886 at 1291.665 kb on - strand, within SM_b20886 at 1291.665 kb on - strand, within SM_b20886 at 1291.757 kb on - strand, within SM_b20886 at 1291.757 kb on - strand, within SM_b20886 at 1291.892 kb on + strand, within SM_b20886 at 1291.892 kb on + strand, within SM_b20886 at 1291.892 kb on + strand, within SM_b20886 at 1291.892 kb on + strand, within SM_b20886 at 1291.912 kb on + strand, within SM_b20886 at 1291.912 kb on + strand, within SM_b20886 at 1291.913 kb on - strand, within SM_b20886 at 1291.913 kb on - strand, within SM_b20886 at 1291.913 kb on - strand, within SM_b20886 at 1291.915 kb on + strand, within SM_b20886 at 1291.915 kb on + strand, within SM_b20886 at 1291.915 kb on + strand, within SM_b20886 at 1291.915 kb on + strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.916 kb on - strand, within SM_b20886 at 1291.957 kb on + strand, within SM_b20886 at 1291.957 kb on + strand, within SM_b20886 at 1291.958 kb on - strand, within SM_b20886 at 1291.958 kb on - strand, within SM_b20886 at 1292.038 kb on + strand, within SM_b20886 at 1292.039 kb on - strand, within SM_b20886
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,289,261 + SM_b20883 0.19 -0.2 1,289,557 + SM_b20883 0.82 +0.0 1,289,557 + SM_b20883 0.82 -1.3 1,290,058 + SM_b20884 0.86 -1.0 1,290,059 - SM_b20884 0.86 -2.1 1,290,158 + -1.7 1,290,158 + -0.1 1,290,158 + +0.2 1,290,237 + -0.2 1,290,237 + +0.3 1,290,237 + -0.3 1,290,238 - -1.4 1,290,238 - -0.7 1,290,257 + +0.2 1,290,257 + -0.9 1,290,258 - -0.1 1,290,340 - SM_b20885 0.19 +1.0 1,290,340 - SM_b20885 0.19 -0.6 1,290,384 + SM_b20885 0.24 +0.1 1,290,384 + SM_b20885 0.24 -0.0 1,290,385 - SM_b20885 0.24 -0.2 1,290,385 - SM_b20885 0.24 +0.4 1,290,454 + SM_b20885 0.31 +1.9 1,290,522 + SM_b20885 0.39 +1.1 1,290,522 + SM_b20885 0.39 -1.9 1,290,523 - SM_b20885 0.39 +0.0 1,290,523 - SM_b20885 0.39 -2.3 1,290,523 - SM_b20885 0.39 -0.3 1,290,523 - SM_b20885 0.39 +1.8 1,290,523 - SM_b20885 0.39 +0.6 1,290,523 - SM_b20885 0.39 +0.9 1,290,564 + SM_b20885 0.43 -0.0 1,290,588 + SM_b20885 0.46 -0.1 1,290,712 + SM_b20885 0.59 -1.7 1,290,846 - SM_b20885 0.74 -1.8 1,290,858 + +1.8 1,290,858 + SM_b20885 0.75 +0.2 1,290,859 - SM_b20885 0.75 +0.1 1,290,859 - SM_b20885 0.75 -0.9 1,290,976 - SM_b20885 0.88 -0.7 1,290,976 - SM_b20885 0.88 +0.0 1,291,020 + -0.6 1,291,148 - +0.7 1,291,191 - -1.3 1,291,204 - -0.1 1,291,249 + +0.3 1,291,250 - +0.2 1,291,347 - +0.1 1,291,430 - -0.0 1,291,447 + -3.3 1,291,511 - -0.8 1,291,531 + -1.7 1,291,532 - -1.0 1,291,532 - -0.9 1,291,532 - -0.9 1,291,532 - +0.2 1,291,619 - SM_b20886 0.11 -0.5 1,291,665 - SM_b20886 0.14 +1.0 1,291,665 - SM_b20886 0.14 +0.3 1,291,757 - SM_b20886 0.21 +0.8 1,291,757 - SM_b20886 0.21 +1.1 1,291,892 + SM_b20886 0.30 -0.5 1,291,892 + SM_b20886 0.30 +1.7 1,291,892 + SM_b20886 0.30 -1.0 1,291,892 + SM_b20886 0.30 -0.1 1,291,912 + SM_b20886 0.32 +1.6 1,291,912 + SM_b20886 0.32 -1.9 1,291,913 - SM_b20886 0.32 +1.0 1,291,913 - SM_b20886 0.32 +0.5 1,291,913 - SM_b20886 0.32 +0.4 1,291,915 + SM_b20886 0.32 +0.2 1,291,915 + SM_b20886 0.32 +0.4 1,291,915 + SM_b20886 0.32 -0.8 1,291,915 + SM_b20886 0.32 -1.1 1,291,916 - SM_b20886 0.32 -1.3 1,291,916 - SM_b20886 0.32 -0.2 1,291,916 - SM_b20886 0.32 +0.2 1,291,916 - SM_b20886 0.32 -0.4 1,291,916 - SM_b20886 0.32 +1.0 1,291,916 - SM_b20886 0.32 +0.5 1,291,916 - SM_b20886 0.32 -0.2 1,291,916 - SM_b20886 0.32 -0.9 1,291,957 + SM_b20886 0.35 -0.9 1,291,957 + SM_b20886 0.35 -0.7 1,291,958 - SM_b20886 0.35 +1.0 1,291,958 - SM_b20886 0.35 +0.2 1,292,038 + SM_b20886 0.41 +0.3 1,292,039 - SM_b20886 0.41 +0.9
Or see this region's nucleotide sequence