Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20665 and SM_b20666 are separated by 283 nucleotides SM_b20666 and SM_b20667 are separated by 16 nucleotides
SM_b20665: SM_b20665 - partial transposase of insertion sequence ISRm17 protein, at 1,466,169 to 1,466,822
_b20665
SM_b20666: SM_b20666 - aldolase, at 1,467,106 to 1,467,783
_b20666
SM_b20667: SM_b20667 - LacI family transcriptional regulator, at 1,467,800 to 1,468,804
_b20667
Position (kb)
1467
1468 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1466.136 kb on + strand at 1466.154 kb on + strand at 1466.155 kb on - strand at 1466.155 kb on - strand at 1466.280 kb on - strand, within SM_b20665 at 1466.280 kb on - strand, within SM_b20665 at 1466.280 kb on - strand, within SM_b20665 at 1466.291 kb on + strand, within SM_b20665 at 1466.963 kb on + strand at 1467.090 kb on + strand at 1467.101 kb on + strand at 1467.101 kb on + strand at 1467.101 kb on + strand at 1467.108 kb on - strand at 1467.193 kb on - strand, within SM_b20666 at 1467.228 kb on - strand, within SM_b20666 at 1467.228 kb on - strand, within SM_b20666 at 1467.329 kb on + strand, within SM_b20666 at 1467.330 kb on - strand, within SM_b20666 at 1467.387 kb on - strand, within SM_b20666 at 1467.422 kb on + strand, within SM_b20666 at 1467.423 kb on - strand, within SM_b20666 at 1467.425 kb on + strand, within SM_b20666 at 1467.425 kb on + strand, within SM_b20666 at 1467.539 kb on + strand, within SM_b20666 at 1467.539 kb on + strand, within SM_b20666 at 1467.694 kb on + strand, within SM_b20666 at 1467.695 kb on - strand, within SM_b20666 at 1467.821 kb on - strand at 1467.907 kb on + strand, within SM_b20667 at 1467.908 kb on - strand, within SM_b20667 at 1468.050 kb on + strand, within SM_b20667 at 1468.236 kb on + strand, within SM_b20667 at 1468.322 kb on + strand, within SM_b20667 at 1468.322 kb on + strand, within SM_b20667 at 1468.322 kb on + strand, within SM_b20667 at 1468.483 kb on - strand, within SM_b20667 at 1468.645 kb on - strand, within SM_b20667
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,466,136 + -0.1 1,466,154 + +0.1 1,466,155 - -0.9 1,466,155 - -2.1 1,466,280 - SM_b20665 0.17 +0.3 1,466,280 - SM_b20665 0.17 -0.9 1,466,280 - SM_b20665 0.17 -0.9 1,466,291 + SM_b20665 0.19 -0.2 1,466,963 + -0.2 1,467,090 + -0.8 1,467,101 + -0.4 1,467,101 + -0.3 1,467,101 + -3.6 1,467,108 - -1.5 1,467,193 - SM_b20666 0.13 -0.1 1,467,228 - SM_b20666 0.18 -0.1 1,467,228 - SM_b20666 0.18 +0.5 1,467,329 + SM_b20666 0.33 +0.4 1,467,330 - SM_b20666 0.33 +0.2 1,467,387 - SM_b20666 0.41 -0.8 1,467,422 + SM_b20666 0.47 -0.0 1,467,423 - SM_b20666 0.47 -1.3 1,467,425 + SM_b20666 0.47 +0.3 1,467,425 + SM_b20666 0.47 -3.3 1,467,539 + SM_b20666 0.64 +0.7 1,467,539 + SM_b20666 0.64 -0.9 1,467,694 + SM_b20666 0.87 -0.8 1,467,695 - SM_b20666 0.87 -0.5 1,467,821 - -2.1 1,467,907 + SM_b20667 0.11 +0.0 1,467,908 - SM_b20667 0.11 +0.5 1,468,050 + SM_b20667 0.25 -0.1 1,468,236 + SM_b20667 0.43 -1.1 1,468,322 + SM_b20667 0.52 -2.3 1,468,322 + SM_b20667 0.52 -0.5 1,468,322 + SM_b20667 0.52 +0.1 1,468,483 - SM_b20667 0.68 -0.4 1,468,645 - SM_b20667 0.84 -0.8
Or see this region's nucleotide sequence