Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20527 and SM_b20528 are separated by 79 nucleotides SM_b20528 and SM_b20529 overlap by 14 nucleotides SM_b20529 and SM_b20530 are separated by 32 nucleotides
SM_b20527: SM_b20527 - hypothetical protein, at 552,144 to 552,578
_b20527
SM_b20528: SM_b20528 - hypothetical protein, at 552,658 to 553,458
_b20528
SM_b20529: SM_b20529 - hypothetical protein, at 553,445 to 554,374
_b20529
SM_b20530: SM_b20530 - hypothetical protein, at 554,407 to 554,745
_b20530
Position (kb) 552
553
554 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 551.682 kb on - strand at 551.711 kb on + strand at 551.711 kb on + strand at 551.899 kb on + strand at 551.900 kb on - strand at 552.092 kb on + strand at 552.093 kb on - strand at 552.209 kb on + strand, within SM_b20527 at 552.210 kb on - strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.354 kb on - strand, within SM_b20527 at 552.354 kb on - strand, within SM_b20527 at 552.406 kb on + strand, within SM_b20527 at 552.880 kb on - strand, within SM_b20528 at 552.880 kb on - strand, within SM_b20528 at 553.059 kb on - strand, within SM_b20528 at 553.121 kb on + strand, within SM_b20528 at 553.121 kb on + strand, within SM_b20528 at 553.127 kb on + strand, within SM_b20528 at 553.127 kb on + strand, within SM_b20528 at 553.135 kb on + strand, within SM_b20528 at 553.135 kb on + strand, within SM_b20528 at 553.160 kb on + strand, within SM_b20528 at 553.161 kb on - strand, within SM_b20528 at 553.288 kb on + strand, within SM_b20528 at 553.289 kb on - strand, within SM_b20528 at 553.289 kb on - strand, within SM_b20528 at 553.446 kb on + strand at 553.532 kb on + strand at 553.547 kb on + strand, within SM_b20529 at 553.589 kb on + strand, within SM_b20529 at 553.589 kb on + strand, within SM_b20529 at 553.691 kb on - strand, within SM_b20529 at 553.691 kb on - strand, within SM_b20529 at 553.691 kb on - strand, within SM_b20529 at 553.743 kb on + strand, within SM_b20529 at 553.743 kb on + strand, within SM_b20529 at 553.743 kb on + strand, within SM_b20529 at 553.743 kb on + strand, within SM_b20529 at 553.744 kb on - strand, within SM_b20529 at 553.748 kb on + strand, within SM_b20529 at 553.748 kb on + strand, within SM_b20529 at 553.749 kb on - strand, within SM_b20529 at 553.749 kb on - strand, within SM_b20529 at 553.881 kb on + strand, within SM_b20529 at 553.882 kb on - strand, within SM_b20529 at 553.928 kb on + strand, within SM_b20529 at 553.928 kb on + strand, within SM_b20529 at 553.928 kb on + strand at 553.972 kb on + strand, within SM_b20529 at 553.972 kb on + strand, within SM_b20529 at 553.972 kb on + strand, within SM_b20529 at 553.973 kb on - strand, within SM_b20529 at 553.974 kb on + strand, within SM_b20529 at 553.975 kb on - strand, within SM_b20529 at 553.975 kb on - strand, within SM_b20529 at 553.975 kb on - strand, within SM_b20529 at 554.001 kb on + strand, within SM_b20529 at 554.001 kb on + strand, within SM_b20529 at 554.001 kb on + strand, within SM_b20529 at 554.120 kb on - strand, within SM_b20529 at 554.151 kb on + strand, within SM_b20529 at 554.152 kb on - strand, within SM_b20529 at 554.205 kb on + strand, within SM_b20529 at 554.205 kb on + strand, within SM_b20529 at 554.205 kb on + strand, within SM_b20529 at 554.206 kb on - strand, within SM_b20529 at 554.206 kb on - strand, within SM_b20529
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 551,682 - -0.8 551,711 + +0.3 551,711 + +1.0 551,899 + -0.8 551,900 - -1.5 552,092 + +1.3 552,093 - +0.4 552,209 + SM_b20527 0.15 -0.4 552,210 - SM_b20527 0.15 +0.1 552,353 + SM_b20527 0.48 +0.1 552,353 + SM_b20527 0.48 -2.7 552,353 + SM_b20527 0.48 -3.3 552,353 + SM_b20527 0.48 +0.1 552,354 - SM_b20527 0.48 -0.4 552,354 - SM_b20527 0.48 +1.0 552,406 + SM_b20527 0.60 -1.7 552,880 - SM_b20528 0.28 -0.3 552,880 - SM_b20528 0.28 -1.2 553,059 - SM_b20528 0.50 +0.2 553,121 + SM_b20528 0.58 -0.5 553,121 + SM_b20528 0.58 -1.0 553,127 + SM_b20528 0.59 +0.6 553,127 + SM_b20528 0.59 -1.1 553,135 + SM_b20528 0.60 -0.1 553,135 + SM_b20528 0.60 -0.8 553,160 + SM_b20528 0.63 -0.9 553,161 - SM_b20528 0.63 +0.2 553,288 + SM_b20528 0.79 -0.1 553,289 - SM_b20528 0.79 -0.9 553,289 - SM_b20528 0.79 +0.7 553,446 + -0.1 553,532 + -0.4 553,547 + SM_b20529 0.11 -0.6 553,589 + SM_b20529 0.15 -1.3 553,589 + SM_b20529 0.15 +0.0 553,691 - SM_b20529 0.26 -0.5 553,691 - SM_b20529 0.26 +0.8 553,691 - SM_b20529 0.26 +0.6 553,743 + SM_b20529 0.32 +0.9 553,743 + SM_b20529 0.32 -3.2 553,743 + SM_b20529 0.32 -0.0 553,743 + SM_b20529 0.32 -0.6 553,744 - SM_b20529 0.32 +1.3 553,748 + SM_b20529 0.33 +0.2 553,748 + SM_b20529 0.33 +0.4 553,749 - SM_b20529 0.33 +0.9 553,749 - SM_b20529 0.33 +0.7 553,881 + SM_b20529 0.47 +0.3 553,882 - SM_b20529 0.47 -0.3 553,928 + SM_b20529 0.52 +0.4 553,928 + SM_b20529 0.52 +1.6 553,928 + +1.1 553,972 + SM_b20529 0.57 -0.0 553,972 + SM_b20529 0.57 +0.1 553,972 + SM_b20529 0.57 +0.1 553,973 - SM_b20529 0.57 -0.1 553,974 + SM_b20529 0.57 +1.3 553,975 - SM_b20529 0.57 -0.4 553,975 - SM_b20529 0.57 -0.9 553,975 - SM_b20529 0.57 -0.7 554,001 + SM_b20529 0.60 +0.1 554,001 + SM_b20529 0.60 +0.9 554,001 + SM_b20529 0.60 -0.7 554,120 - SM_b20529 0.73 -0.6 554,151 + SM_b20529 0.76 -0.0 554,152 - SM_b20529 0.76 -1.5 554,205 + SM_b20529 0.82 +0.9 554,205 + SM_b20529 0.82 -0.0 554,205 + SM_b20529 0.82 +0.1 554,206 - SM_b20529 0.82 +1.0 554,206 - SM_b20529 0.82 +0.3
Or see this region's nucleotide sequence