Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20072 and SM_b20073 are separated by 162 nucleotides SM_b20073 and SM_b20074 are separated by 195 nucleotides SM_b20074 and SM_b20075 are separated by 48 nucleotides SM_b20075 and SM_b20076 are separated by 98 nucleotides
SM_b20072: SM_b20072 - rhizopine binding protein, at 81,239 to 82,168
_b20072
SM_b20073: SM_b20073 - oxidoreductase, at 82,331 to 83,188
_b20073
SM_b20074: SM_b20074 - hypothetical protein, at 83,384 to 83,626
_b20074
SM_b20075: SM_b20075 - hypothetical protein, at 83,675 to 83,866
_b20075
SM_b20076: SM_b20076 - short-chain dehydrogenase, at 83,965 to 84,981
_b20076
Position (kb)
82
83
84 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 81.392 kb on + strand, within SM_b20072 at 81.392 kb on + strand, within SM_b20072 at 81.393 kb on - strand, within SM_b20072 at 81.721 kb on - strand, within SM_b20072 at 81.853 kb on - strand, within SM_b20072 at 81.853 kb on - strand, within SM_b20072 at 82.157 kb on + strand at 82.157 kb on + strand at 82.158 kb on - strand at 82.158 kb on - strand at 82.172 kb on + strand at 82.278 kb on + strand at 82.279 kb on - strand at 82.279 kb on - strand at 82.281 kb on - strand at 82.380 kb on + strand at 82.381 kb on - strand at 82.381 kb on - strand at 82.381 kb on - strand at 82.450 kb on + strand, within SM_b20073 at 82.450 kb on + strand, within SM_b20073 at 82.451 kb on - strand, within SM_b20073 at 82.547 kb on + strand, within SM_b20073 at 82.548 kb on - strand, within SM_b20073 at 82.617 kb on + strand, within SM_b20073 at 82.618 kb on - strand, within SM_b20073 at 82.716 kb on + strand, within SM_b20073 at 82.716 kb on + strand, within SM_b20073 at 82.971 kb on + strand, within SM_b20073 at 82.971 kb on + strand, within SM_b20073 at 82.978 kb on + strand, within SM_b20073 at 82.978 kb on + strand, within SM_b20073 at 83.268 kb on - strand at 83.380 kb on + strand at 83.380 kb on + strand at 83.381 kb on - strand at 83.555 kb on + strand, within SM_b20074 at 83.555 kb on + strand, within SM_b20074 at 83.555 kb on + strand, within SM_b20074 at 83.555 kb on + strand, within SM_b20074 at 83.556 kb on - strand, within SM_b20074 at 83.556 kb on - strand, within SM_b20074 at 83.556 kb on - strand, within SM_b20074 at 83.759 kb on + strand, within SM_b20075 at 83.760 kb on - strand, within SM_b20075 at 83.927 kb on + strand at 83.927 kb on + strand at 83.928 kb on - strand at 83.928 kb on - strand at 83.964 kb on + strand at 83.965 kb on - strand at 83.965 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 81,392 + SM_b20072 0.16 +0.7 81,392 + SM_b20072 0.16 -0.6 81,393 - SM_b20072 0.17 +2.0 81,721 - SM_b20072 0.52 -0.3 81,853 - SM_b20072 0.66 -1.2 81,853 - SM_b20072 0.66 -0.7 82,157 + +1.1 82,157 + -0.5 82,158 - +0.8 82,158 - +0.1 82,172 + -0.4 82,278 + +1.6 82,279 - -0.4 82,279 - +0.9 82,281 - -0.4 82,380 + +0.3 82,381 - +1.6 82,381 - -0.9 82,381 - +0.0 82,450 + SM_b20073 0.14 +1.0 82,450 + SM_b20073 0.14 +0.3 82,451 - SM_b20073 0.14 +0.8 82,547 + SM_b20073 0.25 +0.9 82,548 - SM_b20073 0.25 +0.4 82,617 + SM_b20073 0.33 +4.9 82,618 - SM_b20073 0.33 +0.1 82,716 + SM_b20073 0.45 -0.2 82,716 + SM_b20073 0.45 -0.0 82,971 + SM_b20073 0.75 -0.1 82,971 + SM_b20073 0.75 +3.9 82,978 + SM_b20073 0.75 -0.7 82,978 + SM_b20073 0.75 +0.2 83,268 - -0.3 83,380 + +0.2 83,380 + -0.1 83,381 - +1.0 83,555 + SM_b20074 0.70 +1.0 83,555 + SM_b20074 0.70 -1.6 83,555 + SM_b20074 0.70 -0.3 83,555 + SM_b20074 0.70 +0.5 83,556 - SM_b20074 0.71 -0.6 83,556 - SM_b20074 0.71 +0.1 83,556 - SM_b20074 0.71 -1.9 83,759 + SM_b20075 0.44 +0.9 83,760 - SM_b20075 0.44 +1.2 83,927 + -3.1 83,927 + -0.4 83,928 - +0.4 83,928 - -1.0 83,964 + +1.9 83,965 - -0.0 83,965 - +0.3
Or see this region's nucleotide sequence