Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20011 and SM_b20012 are separated by 31 nucleotides SM_b20012 and SM_b20013 are separated by 55 nucleotides
SM_b20011: SM_b20011 - hypothetical protein, at 15,669 to 16,448
_b20011
SM_b20012: SM_b20012 - hypothetical protein, at 16,480 to 19,023
_b20012
SM_b20013: SM_b20013 - hypothetical protein, at 19,079 to 20,323
_b20013
Position (kb) 16
17
18
19
20 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 15.675 kb on - strand at 15.906 kb on + strand, within SM_b20011 at 15.907 kb on - strand, within SM_b20011 at 15.907 kb on - strand, within SM_b20011 at 15.908 kb on + strand, within SM_b20011 at 15.908 kb on + strand, within SM_b20011 at 15.909 kb on - strand, within SM_b20011 at 16.301 kb on + strand, within SM_b20011 at 16.508 kb on + strand at 16.957 kb on + strand, within SM_b20012 at 16.957 kb on + strand, within SM_b20012 at 16.958 kb on - strand, within SM_b20012 at 16.970 kb on + strand, within SM_b20012 at 17.004 kb on - strand, within SM_b20012 at 17.204 kb on + strand, within SM_b20012 at 17.205 kb on - strand, within SM_b20012 at 17.432 kb on + strand, within SM_b20012 at 17.433 kb on - strand, within SM_b20012 at 17.433 kb on - strand, within SM_b20012 at 17.483 kb on - strand, within SM_b20012 at 17.483 kb on - strand, within SM_b20012 at 17.505 kb on + strand, within SM_b20012 at 17.648 kb on + strand, within SM_b20012 at 17.649 kb on - strand, within SM_b20012 at 17.722 kb on + strand, within SM_b20012 at 17.723 kb on - strand, within SM_b20012 at 18.049 kb on + strand, within SM_b20012 at 18.049 kb on + strand, within SM_b20012 at 18.049 kb on + strand, within SM_b20012 at 18.050 kb on - strand, within SM_b20012 at 18.050 kb on - strand, within SM_b20012 at 18.141 kb on + strand, within SM_b20012 at 18.272 kb on + strand, within SM_b20012 at 18.273 kb on - strand, within SM_b20012 at 18.273 kb on - strand, within SM_b20012 at 18.380 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.662 kb on + strand, within SM_b20012 at 18.663 kb on - strand, within SM_b20012 at 18.663 kb on - strand, within SM_b20012 at 18.737 kb on + strand, within SM_b20012 at 18.737 kb on + strand, within SM_b20012 at 18.738 kb on - strand, within SM_b20012 at 18.770 kb on + strand at 19.081 kb on - strand at 19.081 kb on - strand at 19.110 kb on + strand at 19.111 kb on - strand at 19.111 kb on - strand at 19.226 kb on + strand, within SM_b20013 at 19.227 kb on - strand, within SM_b20013 at 19.270 kb on + strand, within SM_b20013 at 19.271 kb on - strand, within SM_b20013 at 19.272 kb on + strand, within SM_b20013 at 19.382 kb on + strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.383 kb on - strand, within SM_b20013 at 19.423 kb on - strand, within SM_b20013 at 19.423 kb on - strand, within SM_b20013 at 19.470 kb on + strand, within SM_b20013 at 19.471 kb on - strand, within SM_b20013 at 19.569 kb on + strand, within SM_b20013 at 19.612 kb on - strand, within SM_b20013 at 19.911 kb on + strand, within SM_b20013 at 19.912 kb on - strand, within SM_b20013
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 15,675 - +0.5 15,906 + SM_b20011 0.30 -1.3 15,907 - SM_b20011 0.31 +1.3 15,907 - SM_b20011 0.31 -1.2 15,908 + SM_b20011 0.31 +0.7 15,908 + SM_b20011 0.31 +0.2 15,909 - SM_b20011 0.31 -0.3 16,301 + SM_b20011 0.81 -0.2 16,508 + +0.5 16,957 + SM_b20012 0.19 +1.3 16,957 + SM_b20012 0.19 -0.0 16,958 - SM_b20012 0.19 -0.9 16,970 + SM_b20012 0.19 +0.5 17,004 - SM_b20012 0.21 +1.1 17,204 + SM_b20012 0.28 +0.7 17,205 - SM_b20012 0.28 -0.6 17,432 + SM_b20012 0.37 -2.0 17,433 - SM_b20012 0.37 -0.2 17,433 - SM_b20012 0.37 -0.4 17,483 - SM_b20012 0.39 -0.6 17,483 - SM_b20012 0.39 -0.2 17,505 + SM_b20012 0.40 +0.4 17,648 + SM_b20012 0.46 +0.1 17,649 - SM_b20012 0.46 -0.4 17,722 + SM_b20012 0.49 +1.8 17,723 - SM_b20012 0.49 +1.2 18,049 + SM_b20012 0.62 -0.2 18,049 + SM_b20012 0.62 +2.5 18,049 + SM_b20012 0.62 +0.8 18,050 - SM_b20012 0.62 -0.3 18,050 - SM_b20012 0.62 -1.0 18,141 + SM_b20012 0.65 +0.2 18,272 + SM_b20012 0.70 -0.0 18,273 - SM_b20012 0.70 -0.6 18,273 - SM_b20012 0.70 -0.6 18,380 + SM_b20012 0.75 +0.6 18,662 + SM_b20012 0.86 -0.3 18,662 + SM_b20012 0.86 -0.6 18,662 + SM_b20012 0.86 +0.2 18,662 + SM_b20012 0.86 +3.5 18,663 - SM_b20012 0.86 +0.3 18,663 - SM_b20012 0.86 -0.3 18,737 + SM_b20012 0.89 -2.0 18,737 + SM_b20012 0.89 -0.5 18,738 - SM_b20012 0.89 -0.4 18,770 + -0.1 19,081 - +2.1 19,081 - -1.1 19,110 + -0.0 19,111 - +1.3 19,111 - -0.9 19,226 + SM_b20013 0.12 +0.9 19,227 - SM_b20013 0.12 -0.7 19,270 + SM_b20013 0.15 +1.9 19,271 - SM_b20013 0.15 -2.8 19,272 + SM_b20013 0.16 -0.5 19,382 + SM_b20013 0.24 +0.1 19,383 - SM_b20013 0.24 -1.0 19,383 - SM_b20013 0.24 -1.0 19,383 - SM_b20013 0.24 +0.0 19,383 - SM_b20013 0.24 +0.1 19,423 - SM_b20013 0.28 +0.1 19,423 - SM_b20013 0.28 +1.0 19,470 + SM_b20013 0.31 -1.5 19,471 - SM_b20013 0.31 +0.1 19,569 + SM_b20013 0.39 +0.5 19,612 - SM_b20013 0.43 +0.5 19,911 + SM_b20013 0.67 -0.6 19,912 - SM_b20013 0.67 -1.1
Or see this region's nucleotide sequence