Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5715
Experiment: Bacitracin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bacitracin 2 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 156,019 | + | Pf1N1B4_5714 | 0.63 | +1.0 | |
| 156,522 | + | +1.6 | |||
| 156,522 | + | +2.9 | |||
| 156,523 | - | -0.7 | |||
| 156,523 | - | -1.0 | |||
| 156,523 | - | +0.6 | |||
| 156,523 | - | -0.2 | |||
| 156,523 | - | +1.9 | |||
| 156,799 | + | -2.2 | |||
| 156,868 | + | Pf1N1B4_5715 | 0.14 | -0.0 | |
| 157,061 | + | Pf1N1B4_5715 | 0.33 | -1.2 | |
| 157,062 | - | Pf1N1B4_5715 | 0.33 | -1.6 | |
| 157,062 | - | Pf1N1B4_5715 | 0.33 | -1.9 | |
| 157,062 | - | Pf1N1B4_5715 | 0.33 | -1.2 | |
| 157,062 | - | Pf1N1B4_5715 | 0.33 | -0.4 | |
| 157,137 | + | Pf1N1B4_5715 | 0.40 | -0.4 | |
| 157,137 | + | Pf1N1B4_5715 | 0.40 | +0.6 | |
| 157,138 | - | Pf1N1B4_5715 | 0.40 | -1.1 | |
| 157,138 | - | +0.6 | |||
| 157,396 | - | Pf1N1B4_5715 | 0.65 | -1.0 | |
| 157,691 | + | +0.3 | |||
| 158,174 | + | Pf1N1B4_5716 | 0.14 | -1.9 | |
| 158,570 | + | Pf1N1B4_5716 | 0.26 | -1.0 | |
| 158,570 | + | -0.4 |
Or see this region's nucleotide sequence