Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2641

Experiment: Bacitracin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 2 mg/ml
2,979,715	+		Pf1N1B4_2639	0.68	-0.9
2,979,715	+		Pf1N1B4_2639	0.68	-0.7
2,979,716	-		Pf1N1B4_2639	0.68	-0.6
2,979,716	-		Pf1N1B4_2639	0.68	-1.1
2,979,984	+				+1.3
2,979,984	+				-0.7
2,980,088	+				+0.0
2,980,089	-				+1.3
2,980,111	-				+0.1
2,980,154	+				-0.3
2,980,154	+				-1.9
2,980,154	+				+0.0
2,980,154	+				-0.1
2,980,155	-				-0.1
2,980,155	-				+0.1
2,980,155	-				-0.9
2,980,155	-				-1.9
2,980,155	-				+0.1
2,980,155	-				-0.5
2,980,155	-				+0.0
2,980,155	-				+1.3
2,980,180	+				+0.5
2,980,181	-				+0.7
2,980,181	-				-0.5
2,980,181	-				-0.2
2,980,186	+				-0.7
2,980,186	+				+0.1
2,980,186	+				+0.4
2,980,187	-				-1.1
2,980,187	-				+0.3
2,980,187	-				+0.3
2,980,187	-				+0.8
2,980,187	-				-1.2
2,980,279	+		Pf1N1B4_2640	0.22	-0.5
2,980,279	+		Pf1N1B4_2640	0.22	+2.0
2,980,280	-		Pf1N1B4_2640	0.22	-0.3
2,980,280	-		Pf1N1B4_2640	0.22	-2.7
2,980,348	-		Pf1N1B4_2640	0.35	-1.1
2,980,369	+				-0.3
2,980,369	+		Pf1N1B4_2640	0.39	+0.3
2,980,369	+		Pf1N1B4_2640	0.39	+0.3
2,980,370	-		Pf1N1B4_2640	0.39	-0.7
2,980,370	-		Pf1N1B4_2640	0.39	+2.7
2,980,394	+		Pf1N1B4_2640	0.44	+0.1
2,980,395	-		Pf1N1B4_2640	0.44	-0.0
2,980,430	-		Pf1N1B4_2640	0.51	+0.3
2,980,430	-		Pf1N1B4_2640	0.51	+0.4
2,980,437	+		Pf1N1B4_2640	0.52	+1.3
2,980,660	-				-2.5
2,980,660	-				+1.3
2,980,686	+				+1.5
2,980,686	+				-1.1
2,980,686	+				+0.1
2,980,687	-				+0.3
2,980,687	-				-0.3
2,980,806	+				-1.5
2,980,806	+				-1.1
2,980,807	-				+0.3
2,980,833	+		Pf1N1B4_2641	0.11	+0.4
2,980,833	+		Pf1N1B4_2641	0.11	-1.2
2,980,833	+				+0.8
2,980,834	-		Pf1N1B4_2641	0.11	-1.1
2,980,843	-		Pf1N1B4_2641	0.12	+0.7
2,980,843	-		Pf1N1B4_2641	0.12	+1.7
2,980,884	+		Pf1N1B4_2641	0.15	+1.5
2,980,884	+		Pf1N1B4_2641	0.15	-1.9
2,980,884	+		Pf1N1B4_2641	0.15	-0.3
2,980,884	+		Pf1N1B4_2641	0.15	+0.3
2,980,884	+		Pf1N1B4_2641	0.15	-1.1
2,980,884	+		Pf1N1B4_2641	0.15	-1.6
2,980,884	+		Pf1N1B4_2641	0.15	-1.9
2,980,884	+		Pf1N1B4_2641	0.15	-0.1
2,980,885	-		Pf1N1B4_2641	0.15	-1.1
2,980,885	-		Pf1N1B4_2641	0.15	-1.1
2,980,885	-		Pf1N1B4_2641	0.15	+0.5
2,980,885	-		Pf1N1B4_2641	0.15	-2.8
2,980,885	-		Pf1N1B4_2641	0.15	+0.8
2,980,885	-		Pf1N1B4_2641	0.15	-0.7
2,980,885	-		Pf1N1B4_2641	0.15	-0.5
2,980,885	-		Pf1N1B4_2641	0.15	+0.7
2,980,885	-		Pf1N1B4_2641	0.15	-1.7
2,980,957	+		Pf1N1B4_2641	0.21	-1.6
2,980,957	+		Pf1N1B4_2641	0.21	-0.2
2,980,957	+		Pf1N1B4_2641	0.21	+1.3
2,981,060	+		Pf1N1B4_2641	0.29	-0.8
2,981,061	-		Pf1N1B4_2641	0.29	-1.4
2,981,063	+		Pf1N1B4_2641	0.29	-1.3
2,981,063	+		Pf1N1B4_2641	0.29	-0.3
2,981,064	-		Pf1N1B4_2641	0.29	-1.3
2,981,064	-		Pf1N1B4_2641	0.29	-1.1
2,981,487	+		Pf1N1B4_2641	0.63	+0.3
2,981,487	+		Pf1N1B4_2641	0.63	-1.1
2,981,488	-		Pf1N1B4_2641	0.63	+0.8
2,981,604	+		Pf1N1B4_2641	0.72	-0.7
2,981,604	+		Pf1N1B4_2641	0.72	-0.5
2,981,754	+		Pf1N1B4_2641	0.84	+1.1
2,981,754	+		Pf1N1B4_2641	0.84	+0.3
2,981,754	+		Pf1N1B4_2641	0.84	-1.1
2,981,754	+		Pf1N1B4_2641	0.84	-0.7
2,981,755	-				+1.3
2,981,755	-		Pf1N1B4_2641	0.84	-0.4
2,981,942	+				+0.3
2,981,955	+				+0.9
2,981,955	+				+0.7
2,981,955	+				-0.3
2,981,955	+				-2.2
2,981,955	+				-0.7
2,981,955	+				-1.1
2,981,955	+				-0.1
2,981,955	+				+1.3
2,981,955	+				-1.0
2,981,955	+				+0.4
2,981,955	+				+0.3
2,981,955	+				+0.6
2,981,955	+				-0.7
2,981,955	+				-1.0
2,981,956	-				+0.7
2,981,956	-				+0.9
2,981,956	-				+0.3
2,981,956	-				-0.3
2,981,956	-				+0.5
2,981,956	-				+0.7
2,981,956	-				+0.3
2,982,121	+		Pf1N1B4_2642	0.23	-1.5
2,982,122	-		Pf1N1B4_2642	0.23	+0.3
2,982,409	+		Pf1N1B4_2642	0.63	+0.3
2,982,410	-		Pf1N1B4_2642	0.63	-0.2
2,982,584	+		Pf1N1B4_2642	0.88	+0.3
2,982,584	+		Pf1N1B4_2642	0.88	-0.7
2,982,584	+		Pf1N1B4_2642	0.88	-0.9
2,982,584	+		Pf1N1B4_2642	0.88	-0.2
2,982,752	+				+0.3
2,982,752	+				+0.3
2,982,752	+				-0.7
2,982,752	+				+0.4
2,982,752	+				-0.2
2,982,753	-				-1.7
2,982,753	-				-1.1
2,982,753	-				-0.3
2,982,753	-				+0.6
2,982,753	-				+0.3
2,982,753	-				-0.1
2,982,753	-				+0.5
2,982,753	-				-1.1
2,982,753	-				+0.1
2,982,753	-				+0.7
2,982,753	-				-0.2
2,982,838	+				-0.3
2,982,838	+				-2.1
2,982,838	+				-1.6
2,982,839	-				+1.0
2,982,839	-				-0.6
2,982,839	-				+0.3
2,982,915	+		Pf1N1B4_2643	0.18	-0.6
2,982,915	+		Pf1N1B4_2643	0.18	-0.3