Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02939

Experiment: PYE with Carbenicillin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.25 mg/ml
3,098,438	+		CCNA_02937	0.60	+1.2
3,098,438	+		CCNA_02937	0.60	-1.1
3,098,438	+		CCNA_02937	0.60	-1.4
3,098,446	-		CCNA_02937	0.61	+0.9
3,098,446	-		CCNA_02937	0.61	-1.7
3,098,446	-		CCNA_02937	0.61	-1.5
3,098,446	-		CCNA_02937	0.61	+0.1
3,098,462	+		CCNA_02937	0.64	-1.6
3,098,462	+		CCNA_02937	0.64	+1.1
3,098,462	+		CCNA_02937	0.64	-0.1
3,098,508	+		CCNA_02937	0.71	-1.4
3,098,601	+		CCNA_02937	0.85	-1.0
3,098,655	-				+1.1
3,098,705	-				+0.6
3,098,720	-				-0.1
3,098,724	+				-1.3
3,098,734	+				-0.7
3,098,755	-				+2.3
3,098,762	-		CCNA_02938	0.11	+1.3
3,098,772	-		CCNA_02938	0.13	-1.8
3,098,772	-		CCNA_02938	0.13	+2.5
3,098,799	+		CCNA_02938	0.17	-1.7
3,098,807	-		CCNA_02938	0.19	+0.5
3,098,863	+		CCNA_02938	0.28	-2.6
3,098,887	+		CCNA_02938	0.33	-1.0
3,098,895	-		CCNA_02938	0.34	-0.6
3,098,913	-		CCNA_02938	0.37	+0.3
3,098,931	-		CCNA_02938	0.40	-0.2
3,098,942	-		CCNA_02938	0.42	+0.0
3,098,942	-		CCNA_02938	0.42	+0.9
3,098,947	+		CCNA_02938	0.43	-1.2
3,098,954	+		CCNA_02938	0.44	-0.1
3,098,991	+		CCNA_02938	0.51	+0.4
3,099,032	+		CCNA_02938	0.58	+0.2
3,099,033	+		CCNA_02938	0.58	+0.3
3,099,070	+		CCNA_02938	0.64	-0.7
3,099,071	+		CCNA_02938	0.65	+0.1
3,099,099	+		CCNA_02938	0.69	+1.4
3,099,099	+		CCNA_02938	0.69	+2.2
3,099,099	+		CCNA_02938	0.69	+0.8
3,099,100	+		CCNA_02938	0.70	+1.2
3,099,109	+		CCNA_02938	0.71	+1.5
3,099,164	+		CCNA_02938	0.81	+0.2
3,099,224	+				-0.3
3,099,236	-				-1.3
3,099,277	+				+0.7
3,099,283	-				-0.3
3,099,285	-				-0.1
3,099,311	+				+0.6
3,099,311	+				-0.7
3,099,318	-				+2.1
3,099,319	-				+0.1
3,099,410	+				-1.2
3,099,410	+				+0.9
3,099,419	+				+0.6
3,099,459	+				+0.7
3,099,501	+		CCNA_02939	0.20	+0.4
3,099,501	+		CCNA_02939	0.20	+1.0
3,099,506	+		CCNA_02939	0.21	+1.6
3,099,509	-		CCNA_02939	0.22	+2.5
3,099,514	-		CCNA_02939	0.23	+2.0
3,099,514	-		CCNA_02939	0.23	-1.4
3,099,537	+		CCNA_02939	0.30	+0.1
3,099,593	-		CCNA_02939	0.45	-0.1
3,099,640	+		CCNA_02939	0.59	+0.5
3,099,681	+		CCNA_02939	0.70	-0.0
3,099,691	+		CCNA_02939	0.73	+0.1
3,099,708	-		CCNA_02939	0.78	+0.8
3,099,709	-		CCNA_02939	0.78	-0.7
3,099,740	-		CCNA_02939	0.87	+1.9
3,099,837	+				-0.4
3,099,887	+				-0.3
3,099,899	+				-0.2
3,099,899	+				-0.8
3,099,931	-				+0.4
3,099,936	-				+0.1
3,099,949	+		CCNA_02940	0.10	-0.4
3,099,949	+		CCNA_02940	0.10	-0.2
3,099,957	-		CCNA_02940	0.11	-0.8
3,099,963	-		CCNA_02940	0.11	-1.6
3,099,997	-		CCNA_02940	0.13	+0.2
3,100,020	+		CCNA_02940	0.15	-0.3
3,100,070	+		CCNA_02940	0.18	-0.0
3,100,077	+		CCNA_02940	0.18	+0.4
3,100,098	-		CCNA_02940	0.20	-0.4
3,100,163	+		CCNA_02940	0.24	-1.3
3,100,163	+		CCNA_02940	0.24	-0.0
3,100,163	+		CCNA_02940	0.24	-0.9
3,100,163	+		CCNA_02940	0.24	+1.7
3,100,171	-		CCNA_02940	0.24	-0.6
3,100,171	-		CCNA_02940	0.24	+0.7
3,100,171	-		CCNA_02940	0.24	-1.7
3,100,171	-		CCNA_02940	0.24	-1.9
3,100,173	+		CCNA_02940	0.24	-0.3
3,100,173	+		CCNA_02940	0.24	-1.4
3,100,173	+		CCNA_02940	0.24	+0.5
3,100,181	-		CCNA_02940	0.25	-0.6
3,100,181	-		CCNA_02940	0.25	-1.7
3,100,190	+		CCNA_02940	0.25	+0.2
3,100,252	-		CCNA_02940	0.29	+1.4
3,100,277	-		CCNA_02940	0.31	-2.2
3,100,323	+		CCNA_02940	0.34	-0.2
3,100,323	+		CCNA_02940	0.34	-0.7
3,100,323	+		CCNA_02940	0.34	+0.0
3,100,323	+		CCNA_02940	0.34	+1.5
3,100,323	+		CCNA_02940	0.34	-1.2
3,100,323	+		CCNA_02940	0.34	-0.1
3,100,331	-		CCNA_02940	0.34	+0.7
3,100,331	-		CCNA_02940	0.34	+1.3
3,100,345	+		CCNA_02940	0.35	+0.9
3,100,380	-		CCNA_02940	0.37	+0.3
3,100,472	+		CCNA_02940	0.43	+0.4
3,100,477	+		CCNA_02940	0.43	+0.9
3,100,494	-		CCNA_02940	0.44	+1.2
3,100,502	+		CCNA_02940	0.45	-2.6
3,100,502	+		CCNA_02940	0.45	-0.3
3,100,502	+		CCNA_02940	0.45	-0.3
3,100,502	+		CCNA_02940	0.45	-1.0
3,100,502	+		CCNA_02940	0.45	+0.5
3,100,502	+		CCNA_02940	0.45	-1.2
3,100,510	-		CCNA_02940	0.45	-0.5
3,100,510	-		CCNA_02940	0.45	-0.7
3,100,510	-		CCNA_02940	0.45	+1.9
3,100,512	+		CCNA_02940	0.45	+1.0
3,100,546	-		CCNA_02940	0.47	-0.9
3,100,566	-		CCNA_02940	0.49	-0.1
3,100,568	-		CCNA_02940	0.49	+0.9
3,100,581	+		CCNA_02940	0.50	+1.8
3,100,622	-		CCNA_02940	0.52	+0.5
3,100,647	-		CCNA_02940	0.54	+0.8
3,100,671	+		CCNA_02940	0.55	-0.9
3,100,697	+		CCNA_02940	0.57	+0.2
3,100,705	-		CCNA_02940	0.57	+0.2
3,100,710	-		CCNA_02940	0.58	+0.5
3,100,759	-		CCNA_02940	0.61	+0.2
3,100,767	-		CCNA_02940	0.61	+0.8