Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02278

Experiment: PYE with Carbenicillin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.25 mg/ml
2,428,078	+		CCNA_02277	0.59	+0.4
2,428,081	+		CCNA_02277	0.60	+0.2
2,428,083	+		CCNA_02277	0.60	+0.1
2,428,086	-		CCNA_02277	0.60	-1.7
2,428,086	-		CCNA_02277	0.60	-2.0
2,428,086	-		CCNA_02277	0.60	-2.8
2,428,096	-		CCNA_02277	0.60	+1.4
2,428,096	-		CCNA_02277	0.60	-0.7
2,428,105	+		CCNA_02277	0.61	+0.8
2,428,162	-		CCNA_02277	0.63	-0.9
2,428,190	-		CCNA_02277	0.65	-1.3
2,428,220	-		CCNA_02277	0.66	-1.3
2,428,275	-		CCNA_02277	0.68	-2.8
2,428,275	-		CCNA_02277	0.68	-2.5
2,428,320	-		CCNA_02277	0.70	-1.2
2,428,396	-		CCNA_02277	0.74	-1.0
2,428,435	+		CCNA_02277	0.76	+0.3
2,428,444	-		CCNA_02277	0.76	-0.7
2,428,457	+		CCNA_02277	0.77	+0.2
2,428,485	+		CCNA_02277	0.78	+0.5
2,428,493	-		CCNA_02277	0.78	-1.7
2,428,533	+		CCNA_02277	0.80	+0.9
2,428,533	+		CCNA_02277	0.80	+1.6
2,428,538	+		CCNA_02277	0.80	+1.2
2,428,541	-		CCNA_02277	0.81	-1.7
2,428,546	-		CCNA_02277	0.81	-2.0
2,428,621	+		CCNA_02277	0.84	-0.1
2,428,626	+		CCNA_02277	0.84	+0.9
2,428,629	-				+2.4
2,428,636	+		CCNA_02277	0.85	+0.1
2,428,644	-		CCNA_02277	0.85	-1.1
2,428,659	-		CCNA_02277	0.86	-0.9
2,428,661	-		CCNA_02277	0.86	-0.2
2,428,662	+		CCNA_02277	0.86	+0.7
2,428,670	+		CCNA_02277	0.86	+1.5
2,428,670	-		CCNA_02277	0.86	+0.3
2,428,736	+		CCNA_02277	0.89	+0.8
2,428,736	+		CCNA_02277	0.89	-0.3
2,428,736	+		CCNA_02277	0.89	-0.5
2,428,736	+		CCNA_02277	0.89	+1.1
2,428,746	+		CCNA_02277	0.90	+0.5
2,428,800	+				-0.2
2,428,805	+				+0.9
2,428,831	-				+0.8
2,428,889	+				+0.9
2,428,897	-				-0.7
2,428,899	-				-0.3
2,428,906	+				+1.0
2,428,925	-				-0.4
2,428,925	-				-0.1
2,428,936	+				+0.9
2,428,943	+				+0.7
2,428,944	-				+1.5
2,428,963	+				-1.0
2,429,039	-				-2.5
2,429,039	-				-1.2
2,429,096	-				-1.8
2,429,106	+				-1.0
2,429,108	-				-2.2
2,429,128	+				-2.0
2,429,157	+		CCNA_02278	0.13	-0.8
2,429,215	-		CCNA_02278	0.23	-2.6
2,429,218	+		CCNA_02278	0.23	-0.6
2,429,229	+		CCNA_02278	0.25	-0.6
2,429,239	+		CCNA_02278	0.27	-0.9
2,429,239	+		CCNA_02278	0.27	-0.8
2,429,242	-		CCNA_02278	0.27	-2.2
2,429,242	-		CCNA_02278	0.27	-2.4
2,429,247	-		CCNA_02278	0.28	-0.1
2,429,265	+		CCNA_02278	0.31	-2.1
2,429,265	+		CCNA_02278	0.31	-1.7
2,429,268	-		CCNA_02278	0.32	-0.8
2,429,268	-		CCNA_02278	0.32	-1.8
2,429,273	-		CCNA_02278	0.32	-1.3
2,429,273	-		CCNA_02278	0.32	+0.2
2,429,273	-		CCNA_02278	0.32	+0.1
2,429,273	-		CCNA_02278	0.32	+1.4
2,429,273	-		CCNA_02278	0.32	-0.4
2,429,277	+		CCNA_02278	0.33	-0.8
2,429,290	-		CCNA_02278	0.35	-1.3
2,429,309	+		CCNA_02278	0.38	-1.0
2,429,327	+		CCNA_02278	0.41	-1.4
2,429,345	+		CCNA_02278	0.44	+3.4
2,429,395	+		CCNA_02278	0.52	-3.1
2,429,411	+		CCNA_02278	0.55	-2.0
2,429,446	-		CCNA_02278	0.61	+0.1
2,429,491	+		CCNA_02278	0.68	-1.5
2,429,511	+		CCNA_02278	0.71	-1.4
2,429,538	+		CCNA_02278	0.76	-1.3
2,429,546	-		CCNA_02278	0.77	-2.0
2,429,564	+		CCNA_02278	0.80	-2.0
2,429,580	+		CCNA_02278	0.83	-1.8
2,429,594	-		CCNA_02278	0.85	+1.5
2,429,627	-				-1.9
2,429,661	-				+1.4
2,429,701	-				-1.5
2,429,718	-				-0.8
2,429,722	-				-2.2
2,429,740	+				+0.2
2,429,740	+				+0.8
2,429,740	+				-0.5
2,429,740	+				+0.9
2,429,740	+				+0.2
2,429,740	+				+0.8
2,429,740	+				-2.8
2,429,740	+				+0.7
2,429,747	+		CCNA_02279	0.10	+1.6
2,429,748	-		CCNA_02279	0.11	-1.5
2,429,797	-		CCNA_02279	0.18	-0.8
2,429,804	+		CCNA_02279	0.20	+0.9
2,429,824	-		CCNA_02279	0.23	-2.7
2,430,299	-				-0.2