Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02219

Experiment: PYE with Carbenicillin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.25 mg/ml
2,364,479	+				+0.1
2,364,487	-				-0.0
2,364,535	+				-0.3
2,364,555	+		CCNA_02218	0.10	-2.4
2,364,563	-		CCNA_02218	0.12	-1.4
2,364,563	-		CCNA_02218	0.12	-0.2
2,364,563	-		CCNA_02218	0.12	-0.7
2,364,611	+		CCNA_02218	0.19	-0.3
2,364,629	-		CCNA_02218	0.21	-1.9
2,364,629	-		CCNA_02218	0.21	-2.6
2,364,634	-		CCNA_02218	0.22	+0.4
2,364,634	-		CCNA_02218	0.22	+0.2
2,364,657	-		CCNA_02218	0.25	-1.1
2,364,659	+		CCNA_02218	0.25	+0.8
2,364,689	-		CCNA_02218	0.30	-2.5
2,364,689	-		CCNA_02218	0.30	-1.3
2,364,690	-		CCNA_02218	0.30	+0.8
2,364,691	-		CCNA_02218	0.30	-0.6
2,364,729	-		CCNA_02218	0.35	-1.2
2,364,729	-		CCNA_02218	0.35	-2.4
2,364,736	+		CCNA_02218	0.36	-0.1
2,364,831	+		CCNA_02218	0.50	-1.8
2,364,831	+		CCNA_02218	0.50	+0.2
2,364,873	-		CCNA_02218	0.56	+0.1
2,364,873	-		CCNA_02218	0.56	+0.4
2,364,981	+		CCNA_02218	0.72	-0.1
2,365,080	+		CCNA_02218	0.86	-1.4
2,365,137	-				-1.2
2,365,181	-				-0.3
2,365,208	-				-0.5
2,365,213	-				-0.8
2,365,213	-				+1.1
2,365,213	-				+0.5
2,365,282	+				-0.7
2,365,308	+				-1.3
2,365,344	+				-2.2
2,365,352	-				-1.2
2,365,352	-				+0.4
2,365,352	-				-2.2
2,365,465	+				-0.9
2,365,467	+				-1.7
2,365,472	+				-1.9
2,365,472	+				-0.9
2,365,473	-				-1.0
2,365,480	-				-1.5
2,365,480	-				-1.3
2,365,480	-				-1.2
2,365,496	+				-1.7
2,365,608	-		CCNA_02219	0.20	+0.3
2,365,613	-		CCNA_02219	0.21	-2.0
2,365,613	-		CCNA_02219	0.21	+2.1
2,365,625	+		CCNA_02219	0.22	+0.3
2,365,663	+		CCNA_02219	0.27	-2.4
2,365,669	+		CCNA_02219	0.28	-2.6
2,365,671	-		CCNA_02219	0.28	-1.2
2,365,671	-		CCNA_02219	0.28	-2.4
2,365,702	-		CCNA_02219	0.32	-0.6
2,365,713	-		CCNA_02219	0.33	-1.6
2,365,776	-		CCNA_02219	0.41	-1.6
2,365,778	+		CCNA_02219	0.41	-0.4
2,365,781	-		CCNA_02219	0.42	+0.6
2,365,783	+		CCNA_02219	0.42	+1.2
2,365,783	+		CCNA_02219	0.42	-0.0
2,365,783	+		CCNA_02219	0.42	-0.9
2,365,783	+		CCNA_02219	0.42	-1.8
2,365,783	+		CCNA_02219	0.42	-1.0
2,365,783	+		CCNA_02219	0.42	-0.3
2,365,791	-		CCNA_02219	0.43	-1.8
2,365,791	-		CCNA_02219	0.43	-0.9
2,365,791	-		CCNA_02219	0.43	+1.1
2,365,838	-		CCNA_02219	0.49	-1.4
2,365,841	+		CCNA_02219	0.49	-0.4
2,365,843	-		CCNA_02219	0.50	-1.5
2,365,849	-		CCNA_02219	0.50	-1.9
2,365,851	+		CCNA_02219	0.51	+0.1
2,365,896	-		CCNA_02219	0.56	-1.9
2,365,923	+		CCNA_02219	0.60	-0.4
2,365,931	-		CCNA_02219	0.61	-0.6
2,365,981	+		CCNA_02219	0.67	-0.3
2,365,981	+		CCNA_02219	0.67	-1.9
2,365,999	-		CCNA_02219	0.69	+1.4
2,366,031	-		CCNA_02219	0.74	+0.1
2,366,044	+		CCNA_02219	0.75	+0.6
2,366,044	+		CCNA_02219	0.75	-0.8
2,366,056	+		CCNA_02219	0.77	+0.5
2,366,079	-		CCNA_02219	0.80	-1.6
2,366,080	-		CCNA_02219	0.80	-0.0
2,366,098	+		CCNA_02219	0.82	-0.1
2,366,106	-		CCNA_02219	0.83	-0.5
2,366,163	+				-0.8
2,366,166	-				-1.3
2,366,216	+				-0.1
2,366,248	+				+0.4
2,366,271	+				-1.1
2,366,279	-				-1.6
2,366,289	+				-0.8
2,366,289	+				+0.7
2,366,289	+				-0.2
2,366,297	-				-2.1
2,366,372	+				-1.5
2,366,377	+				+0.7
2,366,377	+				-0.5
2,366,380	-				-2.0
2,366,433	-		CCNA_02220	0.12	-1.1
2,366,457	+		CCNA_02220	0.14	-0.7
2,366,457	+		CCNA_02220	0.14	-1.0
2,366,457	+		CCNA_02220	0.14	+1.8
2,366,466	-		CCNA_02220	0.15	+1.1
2,366,501	-		CCNA_02220	0.17	-0.0
2,366,517	+		CCNA_02220	0.18	-2.5
2,366,525	-		CCNA_02220	0.19	-0.4
2,366,588	+		CCNA_02220	0.23	+0.1
2,366,588	+		CCNA_02220	0.23	-0.8
2,366,595	+		CCNA_02220	0.24	-1.4
2,366,596	-		CCNA_02220	0.24	-0.8
2,366,596	-		CCNA_02220	0.24	-2.6
2,366,603	-		CCNA_02220	0.24	-0.6
2,366,622	-		CCNA_02220	0.26	+0.8
2,366,624	-		CCNA_02220	0.26	-2.0
2,366,624	-		CCNA_02220	0.26	-1.9
2,366,654	-		CCNA_02220	0.28	-0.0
2,366,702	+		CCNA_02220	0.31	-0.2
2,366,728	-		CCNA_02220	0.33	-0.4
2,366,784	+		CCNA_02220	0.37	-0.7
2,366,785	-		CCNA_02220	0.37	+0.3
2,366,805	+		CCNA_02220	0.38	-0.5
2,366,820	+		CCNA_02220	0.39	-1.5
2,366,820	+		CCNA_02220	0.39	-0.8
2,366,820	+		CCNA_02220	0.39	-0.9
2,366,820	+		CCNA_02220	0.39	+0.9
2,366,820	+		CCNA_02220	0.39	-1.0
2,366,828	-		CCNA_02220	0.40	+0.1
2,366,828	-		CCNA_02220	0.40	+3.4
2,366,843	+		CCNA_02220	0.41	+0.2
2,366,965	-		CCNA_02220	0.49	+0.6
2,367,001	+		CCNA_02220	0.52	+0.2
2,367,011	+		CCNA_02220	0.52	+1.1
2,367,011	-		CCNA_02220	0.52	-0.1
2,367,013	-		CCNA_02220	0.53	-0.6
2,367,082	-		CCNA_02220	0.57	-0.1
2,367,092	-		CCNA_02220	0.58	-0.9
2,367,201	+		CCNA_02220	0.65	+1.4
2,367,206	+		CCNA_02220	0.66	-1.1
2,367,209	-		CCNA_02220	0.66	+0.1
2,367,209	-		CCNA_02220	0.66	+1.1