Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00971

Experiment: PYE with Carbenicillin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.25 mg/ml
1,048,210	+		CCNA_00970	0.69	-0.3
1,048,237	+		CCNA_00970	0.70	-0.1
1,048,267	+		CCNA_00970	0.71	+2.4
1,048,287	+		CCNA_00970	0.72	+0.9
1,048,327	+		CCNA_00970	0.73	+0.2
1,048,335	-		CCNA_00970	0.73	-1.0
1,048,335	-		CCNA_00970	0.73	-1.4
1,048,337	+		CCNA_00970	0.73	+0.5
1,048,360	+		CCNA_00970	0.74	+2.5
1,048,365	+		CCNA_00970	0.74	+0.1
1,048,385	+		CCNA_00970	0.75	+0.5
1,048,385	+		CCNA_00970	0.75	+1.1
1,048,385	+		CCNA_00970	0.75	+0.3
1,048,385	+		CCNA_00970	0.75	+0.5
1,048,393	-		CCNA_00970	0.75	-0.0
1,048,408	-		CCNA_00970	0.76	+0.4
1,048,418	-		CCNA_00970	0.76	+0.1
1,048,449	+		CCNA_00970	0.77	+0.1
1,048,455	+		CCNA_00970	0.77	+0.8
1,048,463	-		CCNA_00970	0.78	+0.5
1,048,467	-		CCNA_00970	0.78	-1.8
1,048,496	+		CCNA_00970	0.79	-0.1
1,048,496	+		CCNA_00970	0.79	+0.8
1,048,497	-		CCNA_00970	0.79	+0.6
1,048,520	+		CCNA_00970	0.79	+0.6
1,048,520	+		CCNA_00970	0.79	+1.1
1,048,528	-		CCNA_00970	0.80	-2.0
1,048,528	-		CCNA_00970	0.80	-1.6
1,048,541	+		CCNA_00970	0.80	-0.0
1,048,549	-		CCNA_00970	0.80	+0.1
1,048,623	-		CCNA_00970	0.83	+0.5
1,048,629	+		CCNA_00970	0.83	+0.3
1,048,744	+		CCNA_00970	0.87	+1.1
1,048,757	+		CCNA_00970	0.87	+0.2
1,048,762	+		CCNA_00970	0.87	+0.3
1,048,825	+		CCNA_00970	0.90	+0.5
1,048,825	+		CCNA_00970	0.90	+0.7
1,048,825	+		CCNA_00970	0.90	+0.4
1,048,832	+		CCNA_00970	0.90	+1.5
1,048,833	-		CCNA_00970	0.90	-0.2
1,048,837	+		CCNA_00970	0.90	-0.1
1,048,887	+				+0.3
1,048,895	-				-1.4
1,048,895	-				-0.5
1,048,910	+				+1.1
1,048,928	+				-0.6
1,048,973	+				+0.3
1,049,006	-				-1.2
1,049,066	-				-1.3
1,049,077	+				-1.1
1,049,084	-				-1.0
1,049,119	-				+2.6
1,049,146	+				+0.6
1,049,177	-				-1.7
1,049,213	-				+0.3
1,049,229	+				+3.3
1,049,284	+		CCNA_00971	0.15	+0.3
1,049,284	+		CCNA_00971	0.15	+0.5
1,049,318	-		CCNA_00971	0.19	+0.9
1,049,345	-		CCNA_00971	0.22	+1.3
1,049,345	-		CCNA_00971	0.22	+1.4
1,049,368	+				+1.0
1,049,368	+		CCNA_00971	0.25	+2.5
1,049,452	-		CCNA_00971	0.34	+2.3
1,049,517	+		CCNA_00971	0.41	+1.5
1,049,517	+		CCNA_00971	0.41	+1.7
1,049,519	-		CCNA_00971	0.41	+0.0
1,049,533	+		CCNA_00971	0.43	+2.7
1,049,541	-		CCNA_00971	0.44	+0.0
1,049,546	-		CCNA_00971	0.45	+1.8
1,049,561	+		CCNA_00971	0.46	-0.6
1,049,568	+		CCNA_00971	0.47	+2.3
1,049,569	-		CCNA_00971	0.47	+2.2
1,049,576	+		CCNA_00971	0.48	+0.7
1,049,576	-		CCNA_00971	0.48	+2.0
1,049,605	-		CCNA_00971	0.51	+1.6
1,049,628	+		CCNA_00971	0.54	-0.5
1,049,652	+		CCNA_00971	0.56	+0.9
1,049,657	+		CCNA_00971	0.57	+0.7
1,049,657	+		CCNA_00971	0.57	+2.0
1,049,660	-		CCNA_00971	0.57	+1.1
1,049,660	-		CCNA_00971	0.57	+1.0
1,049,665	-		CCNA_00971	0.58	+0.2
1,049,687	+		CCNA_00971	0.60	-0.0
1,049,730	+		CCNA_00971	0.65	-0.5
1,049,737	+		CCNA_00971	0.66	+0.2
1,049,744	-		CCNA_00971	0.67	+2.3
1,049,744	-		CCNA_00971	0.67	+2.2
1,049,745	-		CCNA_00971	0.67	+1.5
1,049,745	-		CCNA_00971	0.67	+2.6
1,049,794	+		CCNA_00971	0.72	+0.1
1,049,797	-		CCNA_00971	0.73	+0.8
1,049,818	+		CCNA_00971	0.75	+1.3
1,049,818	+		CCNA_00971	0.75	+0.5
1,049,818	+		CCNA_00971	0.75	+1.1
1,049,845	+		CCNA_00971	0.78	+0.7
1,049,879	+		CCNA_00971	0.82	+0.2
1,049,881	-		CCNA_00971	0.82	+1.2
1,049,924	+		CCNA_00971	0.87	+1.5
1,049,956	-				+1.5
1,049,988	+				+2.1
1,049,991	-				+1.1
1,049,991	-				+1.0
1,049,996	-				+2.0
1,050,031	-				+1.1
1,050,182	+				-0.4
1,050,189	-				+0.7
1,050,205	+				-1.3
1,050,213	-				+1.4
1,050,280	-		CCNA_00972	0.38	+1.1
1,050,280	-		CCNA_00972	0.38	+0.6
1,050,284	-		CCNA_00972	0.41	+0.2
1,050,288	+		CCNA_00972	0.44	-0.6
1,050,288	+		CCNA_00972	0.44	-1.0
1,050,288	+		CCNA_00972	0.44	-0.5
1,050,399	+				-1.7
1,050,412	+				+0.5
1,050,420	-		CCNA_00973	0.11	+0.8
1,050,420	-		CCNA_00973	0.11	-0.6
1,050,420	-		CCNA_00973	0.11	+0.7
1,050,420	-		CCNA_00973	0.11	-0.1
1,050,431	+		CCNA_00973	0.14	-0.8
1,050,431	+		CCNA_00973	0.14	+1.0
1,050,441	+		CCNA_00973	0.16	-0.3
1,050,482	-		CCNA_00973	0.26	+0.2
1,050,482	-		CCNA_00973	0.26	-0.3
1,050,515	-		CCNA_00973	0.34	+1.3
1,050,558	-		CCNA_00973	0.45	-0.5
1,050,561	+		CCNA_00973	0.46	+0.4
1,050,590	-		CCNA_00973	0.53	+0.6
1,050,600	+		CCNA_00973	0.55	+1.7
1,050,600	+		CCNA_00973	0.55	-1.3
1,050,600	+		CCNA_00973	0.55	+0.7
1,050,600	+		CCNA_00973	0.55	+1.1
1,050,608	-		CCNA_00973	0.57	+0.8
1,050,608	-		CCNA_00973	0.57	+0.4
1,050,608	-		CCNA_00973	0.57	+1.0
1,050,608	-		CCNA_00973	0.57	+0.2
1,050,608	-		CCNA_00973	0.57	+1.0
1,050,634	-		CCNA_00973	0.63	+1.2
1,050,665	-		CCNA_00973	0.71	+2.0
1,050,676	+		CCNA_00973	0.74	-1.4
1,050,689	+		CCNA_00973	0.77	-0.5
1,050,696	+		CCNA_00973	0.79	-1.0
1,050,696	+		CCNA_00973	0.79	-2.6
1,050,696	+		CCNA_00973	0.79	-0.4
1,050,698	-		CCNA_00973	0.79	+0.6
1,050,704	-		CCNA_00973	0.81	-0.1
1,050,704	-		CCNA_00973	0.81	+0.5
1,050,704	-		CCNA_00973	0.81	-0.4
1,050,704	-		CCNA_00973	0.81	+0.4
1,050,704	-		CCNA_00973	0.81	+0.0
1,050,704	-		CCNA_00973	0.81	+0.4
1,050,704	-		CCNA_00973	0.81	+0.1
1,050,704	-		CCNA_00973	0.81	+1.7
1,050,704	-		CCNA_00973	0.81	+0.7
1,050,742	-				+0.2
1,050,791	+				-2.3
1,050,791	+				-0.6
1,050,791	+				+1.0
1,050,794	-				-1.2
1,050,794	-				-0.3
1,050,794	-				-0.5
1,050,799	-				-1.8
1,050,799	-				-1.1
1,050,799	-				-0.3
1,050,799	-				+0.3
1,050,799	-				-0.9
1,050,880	+				-0.3
1,050,880	+				-2.2
1,050,888	-				-0.8
1,050,900	-				+1.5
1,050,989	-				+0.7
1,050,989	-				-1.4