Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2593

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,675,031	+		Synpcc7942_2591	0.64	+0.5
2,675,032	-		Synpcc7942_2591	0.64	-1.1
2,675,073	+		Synpcc7942_2591	0.70	-1.4
2,675,087	-		Synpcc7942_2591	0.72	-0.1
2,675,109	-		Synpcc7942_2591	0.75	-0.1
2,675,178	-		Synpcc7942_2591	0.86	-0.1
2,675,250	+				-1.1
2,675,278	+				-1.1
2,675,280	+				-2.1
2,675,286	-				+0.5
2,675,288	-				+0.7
2,675,288	-				+0.3
2,675,288	-				-0.1
2,675,291	+				-2.1
2,675,291	+				-1.1
2,675,299	-				+0.5
2,675,299	-				-0.1
2,675,301	+				+0.6
2,675,960	+				+0.9
2,675,960	+				+0.6
2,675,968	-				-0.1
2,676,002	+				+0.6
2,676,028	-				-1.1
2,676,028	-				-1.7
2,676,054	-				-1.1
2,676,059	-				-0.1
2,676,062	+				+0.9
2,676,071	+				-0.1
2,676,076	+				+0.1
2,676,081	+		Synpcc7942_2593	0.10	-2.1
2,676,081	+		Synpcc7942_2593	0.10	-1.1
2,676,081	+		Synpcc7942_2593	0.10	-0.1
2,676,081	+		Synpcc7942_2593	0.10	-0.1
2,676,081	+		Synpcc7942_2593	0.10	-1.7
2,676,086	+		Synpcc7942_2593	0.11	-1.1
2,676,089	-		Synpcc7942_2593	0.12	+0.5
2,676,089	-		Synpcc7942_2593	0.12	-1.8
2,676,089	-		Synpcc7942_2593	0.12	-2.7
2,676,089	-		Synpcc7942_2593	0.12	+0.9
2,676,091	+		Synpcc7942_2593	0.12	-2.4
2,676,099	-		Synpcc7942_2593	0.14	+0.9
2,676,127	+		Synpcc7942_2593	0.19	-0.7
2,676,185	+		Synpcc7942_2593	0.30	-1.1
2,676,208	+		Synpcc7942_2593	0.34	-0.1
2,676,215	-		Synpcc7942_2593	0.35	-0.9
2,676,236	-		Synpcc7942_2593	0.39	-0.5
2,676,272	+		Synpcc7942_2593	0.46	+1.9
2,676,291	-		Synpcc7942_2593	0.50	-0.7
2,676,301	+		Synpcc7942_2593	0.51	-0.7
2,676,309	-		Synpcc7942_2593	0.53	-1.6
2,676,320	+		Synpcc7942_2593	0.55	+0.5
2,676,362	+		Synpcc7942_2593	0.63	-2.3
2,676,370	-		Synpcc7942_2593	0.64	-1.1
2,676,370	-		Synpcc7942_2593	0.64	-1.7
2,676,374	+		Synpcc7942_2593	0.65	-1.1
2,676,376	+		Synpcc7942_2593	0.65	+1.5
2,676,392	+		Synpcc7942_2593	0.68	+0.1
2,676,400	-		Synpcc7942_2593	0.70	-1.3
2,676,409	-		Synpcc7942_2593	0.72	-1.1
2,676,433	+		Synpcc7942_2593	0.76	-0.9
2,676,435	+		Synpcc7942_2593	0.76	-1.1
2,676,441	-		Synpcc7942_2593	0.77	-1.7
2,676,477	+		Synpcc7942_2593	0.84	-0.7
2,676,477	+		Synpcc7942_2593	0.84	-0.9
2,676,477	+		Synpcc7942_2593	0.84	-1.1
2,676,485	-		Synpcc7942_2593	0.86	+0.3
2,676,498	+		Synpcc7942_2593	0.88	-1.1
2,676,514	+				-2.1
2,676,563	-				-0.9
2,676,583	-				-0.9
2,676,697	-				-1.1
2,676,743	-				-0.1
2,676,761	+				-1.1
2,676,783	+				-0.1
2,676,799	-				-1.3
2,676,843	+		Synpcc7942_2594	0.14	+0.9
2,676,848	-		Synpcc7942_2594	0.14	-0.9
2,676,879	+		Synpcc7942_2594	0.19	-0.9
2,676,885	+		Synpcc7942_2594	0.20	+0.9
2,676,912	+		Synpcc7942_2594	0.25	-1.1
2,676,920	-		Synpcc7942_2594	0.26	+0.5
2,676,947	-		Synpcc7942_2594	0.31	-0.6
2,676,985	-		Synpcc7942_2594	0.37	-1.7
2,676,995	-		Synpcc7942_2594	0.38	-1.4
2,677,001	-		Synpcc7942_2594	0.39	-0.4
2,677,001	-		Synpcc7942_2594	0.39	-1.1
2,677,048	+		Synpcc7942_2594	0.47	-3.4
2,677,073	+		Synpcc7942_2594	0.51	-0.1
2,677,085	-		Synpcc7942_2594	0.53	-1.1
2,677,121	+		Synpcc7942_2594	0.59	+0.5
2,677,121	+		Synpcc7942_2594	0.59	+1.5
2,677,121	+		Synpcc7942_2594	0.59	-0.7
2,677,129	-		Synpcc7942_2594	0.60	-1.3
2,677,166	+		Synpcc7942_2594	0.66	+1.0
2,677,167	+		Synpcc7942_2594	0.67	-1.1
2,677,244	-		Synpcc7942_2594	0.79	-1.0
2,677,253	+		Synpcc7942_2594	0.81	-0.1
2,677,253	+		Synpcc7942_2594	0.81	-1.7
2,677,254	-		Synpcc7942_2594	0.81	-1.1
2,677,268	-		Synpcc7942_2594	0.83	+0.3
2,677,289	-		Synpcc7942_2594	0.86	+0.2
2,677,301	+		Synpcc7942_2594	0.88	+1.3
2,677,314	-				-1.7
2,677,314	-				+0.9
2,677,314	-				+1.5
2,677,316	+				-2.3
2,677,323	-				-1.1
2,677,329	+				+0.5
2,677,374	+				-1.1
2,677,383	-				+2.1
2,677,400	+				-2.1
2,677,403	-				-1.1
2,677,405	+				-2.4
2,677,408	-				-1.7
2,677,444	-				-1.9
2,677,444	-				-0.1
2,677,482	+				-1.1
2,677,489	-				-0.1
2,677,503	+				-2.7
2,677,511	-				-1.1
2,677,526	-		Synpcc7942_2595	0.10	-0.1
2,677,535	-		Synpcc7942_2595	0.11	-2.1