Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2500

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,580,146	+		Synpcc7942_2499	0.32	+0.9
2,580,187	-		Synpcc7942_2499	0.35	-0.1
2,580,192	-		Synpcc7942_2499	0.36	+0.2
2,580,212	-		Synpcc7942_2499	0.37	-1.1
2,580,247	-		Synpcc7942_2499	0.40	-0.5
2,580,271	+		Synpcc7942_2499	0.41	-0.4
2,580,286	+		Synpcc7942_2499	0.43	+0.9
2,580,294	-				-0.1
2,580,305	-		Synpcc7942_2499	0.44	-1.1
2,580,305	-		Synpcc7942_2499	0.44	-0.1
2,580,318	-		Synpcc7942_2499	0.45	-0.1
2,580,329	+		Synpcc7942_2499	0.46	-0.1
2,580,330	+		Synpcc7942_2499	0.46	+0.5
2,580,330	+		Synpcc7942_2499	0.46	+0.5
2,580,345	-		Synpcc7942_2499	0.47	+0.9
2,580,345	-		Synpcc7942_2499	0.47	-0.4
2,580,361	-		Synpcc7942_2499	0.48	-1.7
2,580,364	-		Synpcc7942_2499	0.48	-1.7
2,580,369	+		Synpcc7942_2499	0.49	-0.1
2,580,372	-		Synpcc7942_2499	0.49	-1.1
2,580,377	-		Synpcc7942_2499	0.49	-0.4
2,580,523	-		Synpcc7942_2499	0.60	-0.8
2,580,528	-		Synpcc7942_2499	0.61	-0.7
2,580,528	-		Synpcc7942_2499	0.61	-1.1
2,580,530	+		Synpcc7942_2499	0.61	+0.5
2,580,530	+		Synpcc7942_2499	0.61	+0.3
2,580,538	-		Synpcc7942_2499	0.61	-1.1
2,580,538	-		Synpcc7942_2499	0.61	-0.1
2,580,538	-		Synpcc7942_2499	0.61	-0.1
2,580,556	-		Synpcc7942_2499	0.63	+1.0
2,580,569	+		Synpcc7942_2499	0.64	-1.1
2,580,577	-		Synpcc7942_2499	0.64	-0.1
2,580,580	-		Synpcc7942_2499	0.65	+0.9
2,580,602	-		Synpcc7942_2499	0.66	-0.1
2,580,714	-		Synpcc7942_2499	0.74	-0.1
2,580,725	-		Synpcc7942_2499	0.75	+0.9
2,580,810	-		Synpcc7942_2499	0.82	-0.6
2,580,812	+		Synpcc7942_2499	0.82	+1.2
2,580,812	+		Synpcc7942_2499	0.82	-1.7
2,580,812	+		Synpcc7942_2499	0.82	+0.3
2,580,823	+		Synpcc7942_2499	0.83	+1.5
2,580,835	-		Synpcc7942_2499	0.84	-0.6
2,580,852	+		Synpcc7942_2499	0.85	+1.4
2,580,892	-		Synpcc7942_2499	0.88	-0.1
2,580,903	+		Synpcc7942_2499	0.89	+1.7
2,580,912	-		Synpcc7942_2499	0.89	-0.1
2,580,948	+				-0.1
2,580,956	-				+2.9
2,580,956	-				+0.7
2,581,006	+				-0.5
2,581,025	-				-2.1
2,581,036	-				-1.1
2,581,053	+				-1.1
2,581,053	+				-0.7
2,581,053	+				+0.6
2,581,088	+				+0.5
2,581,094	+				+0.3
2,581,094	+				-0.1
2,581,102	-				+0.1
2,581,125	+				+0.3
2,581,127	+				-1.1
2,581,137	+				+0.9
2,581,137	+				+0.9
2,581,145	-				-0.1
2,581,145	-				+1.2
2,581,145	-				-0.5
2,581,156	+				-0.5
2,581,167	-		Synpcc7942_2500	0.11	+0.5
2,581,194	-		Synpcc7942_2500	0.16	+1.3
2,581,228	+				+1.9
2,581,228	+		Synpcc7942_2500	0.21	-1.1
2,581,228	+		Synpcc7942_2500	0.21	-0.7
2,581,228	+		Synpcc7942_2500	0.21	-0.1
2,581,236	-		Synpcc7942_2500	0.23	-1.1
2,581,248	-		Synpcc7942_2500	0.24	-1.1
2,581,279	+		Synpcc7942_2500	0.29	-1.1
2,581,281	-		Synpcc7942_2500	0.30	+0.3
2,581,281	-		Synpcc7942_2500	0.30	-2.4
2,581,307	+		Synpcc7942_2500	0.34	+0.9
2,581,313	+		Synpcc7942_2500	0.35	+1.1
2,581,313	-		Synpcc7942_2500	0.35	+0.9
2,581,313	-		Synpcc7942_2500	0.35	-0.9
2,581,315	+		Synpcc7942_2500	0.35	+0.6
2,581,317	+		Synpcc7942_2500	0.36	-1.1
2,581,317	+		Synpcc7942_2500	0.36	-0.9
2,581,370	+		Synpcc7942_2500	0.44	+0.9
2,581,444	+		Synpcc7942_2500	0.56	-1.5
2,581,494	+		Synpcc7942_2500	0.64	-0.1
2,581,527	+		Synpcc7942_2500	0.69	+1.5
2,581,535	-		Synpcc7942_2500	0.71	-1.7
2,581,554	-		Synpcc7942_2500	0.74	-1.1
2,581,568	+		Synpcc7942_2500	0.76	+0.9
2,581,593	+		Synpcc7942_2500	0.80	+0.9
2,581,614	-		Synpcc7942_2500	0.83	-1.4
2,581,614	-		Synpcc7942_2500	0.83	+2.5
2,581,642	+		Synpcc7942_2500	0.88	+0.5
2,581,650	+				+0.9
2,581,699	+				-1.1
2,581,709	-				-0.1
2,581,742	+				-1.1
2,581,755	-				-0.1
2,581,756	+				+0.5
2,581,801	+				-1.4
2,581,803	+				-1.7
2,581,803	+				-0.1
2,581,811	-				-0.5
2,581,814	+				-0.1
2,581,816	-				-0.1
2,581,822	-				-0.1
2,581,822	-				+1.9
2,581,908	-				+1.5