Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2475

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,556,407	-				+2.0
2,556,418	+				+0.9
2,556,418	+				-1.1
2,556,426	-				+0.6
2,556,426	-				-0.7
2,556,426	-				+0.9
2,556,477	-		Synpcc7942_2474	0.19	+1.5
2,556,511	+		Synpcc7942_2474	0.40	+0.9
2,556,532	+		Synpcc7942_2474	0.52	-0.1
2,556,537	+		Synpcc7942_2474	0.56	+1.2
2,556,542	+		Synpcc7942_2474	0.59	-0.1
2,556,542	+		Synpcc7942_2474	0.59	-0.1
2,556,542	+		Synpcc7942_2474	0.59	-0.5
2,556,542	+		Synpcc7942_2474	0.59	+0.3
2,556,542	+		Synpcc7942_2474	0.59	+1.1
2,556,542	+		Synpcc7942_2474	0.59	+2.2
2,556,542	+		Synpcc7942_2474	0.59	-0.9
2,556,542	+		Synpcc7942_2474	0.59	+0.8
2,556,542	+		Synpcc7942_2474	0.59	+0.6
2,556,550	-		Synpcc7942_2474	0.64	+0.5
2,556,550	-		Synpcc7942_2474	0.64	+0.9
2,556,550	-		Synpcc7942_2474	0.64	-2.1
2,556,550	-		Synpcc7942_2474	0.64	+0.1
2,556,550	-		Synpcc7942_2474	0.64	-1.1
2,556,563	-		Synpcc7942_2474	0.72	-1.7
2,556,565	-		Synpcc7942_2474	0.73	-0.1
2,556,597	+				+0.9
2,556,615	-				+0.3
2,556,641	-				-1.1
2,556,658	+				+2.0
2,556,660	+				-0.5
2,556,671	-				-1.7
2,556,672	+				-0.1
2,556,672	+				+0.7
2,558,119	-				-0.1
2,558,160	+				+0.9
2,558,168	-				+0.9
2,558,168	-				-0.1
2,558,192	+				-0.1
2,558,192	+				+1.9
2,558,192	+				-0.1
2,558,192	+				-0.7
2,558,192	+				-1.7
2,558,192	+				-0.3
2,558,200	-				-0.1
2,558,244	+				-1.7
2,558,284	-				-1.7
2,558,294	+		Synpcc7942_2476	0.11	+0.9
2,558,297	+		Synpcc7942_2476	0.12	-0.7
2,558,305	-		Synpcc7942_2476	0.15	+0.0
2,558,406	-		Synpcc7942_2476	0.45	-1.1
2,558,408	+		Synpcc7942_2476	0.45	-1.1
2,558,416	-		Synpcc7942_2476	0.48	+1.5
2,558,428	+		Synpcc7942_2476	0.51	-1.7
2,558,445	+		Synpcc7942_2476	0.56	+0.9
2,558,445	+		Synpcc7942_2476	0.56	-1.1
2,558,445	+		Synpcc7942_2476	0.56	+0.9
2,558,453	-		Synpcc7942_2476	0.59	-1.1
2,558,453	-		Synpcc7942_2476	0.59	+1.5
2,558,485	+		Synpcc7942_2476	0.68	+1.9
2,558,485	+		Synpcc7942_2476	0.68	-2.4
2,558,485	+		Synpcc7942_2476	0.68	-0.9
2,558,485	+		Synpcc7942_2476	0.68	-1.7
2,558,493	-		Synpcc7942_2476	0.71	-1.9
2,558,493	-		Synpcc7942_2476	0.71	-1.7
2,558,493	-		Synpcc7942_2476	0.71	-0.1
2,558,493	-		Synpcc7942_2476	0.71	-0.1
2,558,493	-		Synpcc7942_2476	0.71	+0.9
2,558,494	+		Synpcc7942_2476	0.71	-0.1
2,558,562	-				-0.1
2,558,615	+				+0.5
2,558,657	-				+1.5
2,558,703	+	sulA	Synpcc7942_2477	0.13	+0.9
2,558,705	+	sulA	Synpcc7942_2477	0.13	+1.9
2,558,705	+	sulA	Synpcc7942_2477	0.13	-0.1
2,558,713	-	sulA	Synpcc7942_2477	0.14	-1.1
2,558,713	-	sulA	Synpcc7942_2477	0.14	-1.4
2,558,713	-	sulA	Synpcc7942_2477	0.14	-0.7
2,558,713	-	sulA	Synpcc7942_2477	0.14	-0.1
2,558,713	-	sulA	Synpcc7942_2477	0.14	-0.5
2,558,756	+	sulA	Synpcc7942_2477	0.19	-0.1
2,558,764	-	sulA	Synpcc7942_2477	0.20	-0.1
2,558,781	-	sulA	Synpcc7942_2477	0.22	+1.5
2,558,783	+	sulA	Synpcc7942_2477	0.22	-1.4
2,558,786	-				-1.1
2,558,791	-	sulA	Synpcc7942_2477	0.23	+0.6
2,558,878	-	sulA	Synpcc7942_2477	0.32	-0.1
2,558,886	-	sulA	Synpcc7942_2477	0.33	+2.2
2,558,895	-	sulA	Synpcc7942_2477	0.34	-0.5
2,558,928	+	sulA	Synpcc7942_2477	0.38	-2.1
2,558,954	-	sulA	Synpcc7942_2477	0.41	-1.1
2,558,954	-	sulA	Synpcc7942_2477	0.41	-2.4
2,559,025	+	sulA	Synpcc7942_2477	0.49	-0.1
2,559,025	+	sulA	Synpcc7942_2477	0.49	-2.1
2,559,027	+	sulA	Synpcc7942_2477	0.49	-0.1
2,559,074	+	sulA	Synpcc7942_2477	0.54	-0.1
2,559,080	-	sulA	Synpcc7942_2477	0.55	-0.1
2,559,090	+	sulA	Synpcc7942_2477	0.56	-1.1
2,559,098	-	sulA	Synpcc7942_2477	0.57	-1.1