Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2417

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,488,394	+				+0.5
2,488,394	+				+0.3
2,488,438	+				-1.1
2,488,487	+				+1.9
2,488,490	-				+0.7
2,488,490	-				+0.9
2,488,490	-				-1.1
2,488,490	-				+1.9
2,488,491	-				+2.7
2,488,495	-				-0.1
2,488,495	-				+1.2
2,488,499	+				+1.2
2,488,500	-				+0.9
2,488,514	+				-1.1
2,488,514	+				+1.2
2,488,522	-	srrA	Synpcc7942_2416	0.11	+0.2
2,488,522	-	srrA	Synpcc7942_2416	0.11	-0.1
2,488,527	-	srrA	Synpcc7942_2416	0.11	-0.1
2,488,542	-	srrA	Synpcc7942_2416	0.13	+1.3
2,488,574	-	srrA	Synpcc7942_2416	0.17	+1.4
2,488,588	+	srrA	Synpcc7942_2416	0.19	+3.1
2,488,591	-	srrA	Synpcc7942_2416	0.20	-0.5
2,488,596	-	srrA	Synpcc7942_2416	0.20	-1.4
2,488,596	-	srrA	Synpcc7942_2416	0.20	-0.5
2,488,603	+	srrA	Synpcc7942_2416	0.21	+3.6
2,488,617	-	srrA	Synpcc7942_2416	0.23	+1.4
2,488,617	-	srrA	Synpcc7942_2416	0.23	+2.3
2,488,617	-	srrA	Synpcc7942_2416	0.23	+0.3
2,488,646	-	srrA	Synpcc7942_2416	0.27	-0.5
2,488,648	-	srrA	Synpcc7942_2416	0.27	+0.5
2,488,669	+	srrA	Synpcc7942_2416	0.30	-0.1
2,488,670	-	srrA	Synpcc7942_2416	0.30	-0.1
2,488,690	+	srrA	Synpcc7942_2416	0.33	-1.4
2,488,727	-	srrA	Synpcc7942_2416	0.37	+0.1
2,488,727	-	srrA	Synpcc7942_2416	0.37	+0.9
2,488,772	+	srrA	Synpcc7942_2416	0.43	+0.3
2,488,772	+	srrA	Synpcc7942_2416	0.43	+0.5
2,488,780	-	srrA	Synpcc7942_2416	0.44	+4.0
2,488,782	+	srrA	Synpcc7942_2416	0.45	-0.1
2,488,785	-	srrA	Synpcc7942_2416	0.45	-0.1
2,488,821	+	srrA	Synpcc7942_2416	0.50	+1.5
2,488,831	+	srrA	Synpcc7942_2416	0.51	+0.6
2,488,834	-	srrA	Synpcc7942_2416	0.51	+0.8
2,488,858	+	srrA	Synpcc7942_2416	0.54	-0.1
2,488,866	-	srrA	Synpcc7942_2416	0.55	+0.3
2,488,867	+	srrA	Synpcc7942_2416	0.56	+1.5
2,488,867	+	srrA	Synpcc7942_2416	0.56	-1.1
2,488,875	-	srrA	Synpcc7942_2416	0.57	+3.1
2,488,875	-	srrA	Synpcc7942_2416	0.57	+1.9
2,488,875	-	srrA	Synpcc7942_2416	0.57	+0.9
2,488,899	-	srrA	Synpcc7942_2416	0.60	-1.1
2,488,906	+	srrA	Synpcc7942_2416	0.61	+3.5
2,488,912	-	srrA	Synpcc7942_2416	0.61	+1.7
2,488,926	+	srrA	Synpcc7942_2416	0.63	+1.2
2,488,926	+	srrA	Synpcc7942_2416	0.63	+1.4
2,488,931	+	srrA	Synpcc7942_2416	0.64	-1.1
2,488,934	-	srrA	Synpcc7942_2416	0.64	+0.7
2,488,934	-	srrA	Synpcc7942_2416	0.64	+2.8
2,488,934	-	srrA	Synpcc7942_2416	0.64	-2.7
2,488,934	-	srrA	Synpcc7942_2416	0.64	+2.5
2,488,934	-	srrA	Synpcc7942_2416	0.64	+2.2
2,488,946	-	srrA	Synpcc7942_2416	0.66	+0.1
2,488,947	+	srrA	Synpcc7942_2416	0.66	-0.1
2,488,947	+	srrA	Synpcc7942_2416	0.66	+2.2
2,488,999	+	srrA	Synpcc7942_2416	0.73	-2.9
2,489,025	+	srrA	Synpcc7942_2416	0.76	+1.8
2,489,054	+	srrA	Synpcc7942_2416	0.80	+1.5
2,489,090	+	srrA	Synpcc7942_2416	0.85	+1.5
2,489,101	+	srrA	Synpcc7942_2416	0.86	-1.7
2,489,119	+	srrA	Synpcc7942_2416	0.88	-1.1
2,489,127	-	srrA	Synpcc7942_2416	0.89	+1.0
2,489,182	-				+0.9
2,489,191	+				+0.1
2,489,299	+				-0.1
2,489,354	+				+0.9
2,489,366	+				+0.9
2,489,374	-				-1.1
2,489,395	-				+1.9
2,489,452	-	srrA	Synpcc7942_2417	0.11	-1.1
2,489,493	+	srrA	Synpcc7942_2417	0.14	-0.1
2,489,496	-	srrA	Synpcc7942_2417	0.14	+1.2
2,489,514	-	srrA	Synpcc7942_2417	0.16	-1.3
2,489,537	-	srrA	Synpcc7942_2417	0.18	-1.1
2,489,537	-	srrA	Synpcc7942_2417	0.18	+1.5
2,489,545	-	srrA	Synpcc7942_2417	0.18	-0.1
2,489,561	+	srrA	Synpcc7942_2417	0.20	-0.1
2,489,613	+	srrA	Synpcc7942_2417	0.24	-0.1
2,489,623	-	srrA	Synpcc7942_2417	0.24	-0.6
2,489,678	-	srrA	Synpcc7942_2417	0.29	+0.6
2,489,716	+	srrA	Synpcc7942_2417	0.32	-0.1
2,489,716	+	srrA	Synpcc7942_2417	0.32	+0.9
2,489,716	-	srrA	Synpcc7942_2417	0.32	-0.1
2,489,792	+	srrA	Synpcc7942_2417	0.38	+0.9
2,489,800	-	srrA	Synpcc7942_2417	0.38	+0.1
2,489,832	-	srrA	Synpcc7942_2417	0.41	-1.4
2,489,880	+	srrA	Synpcc7942_2417	0.45	-1.1
2,489,883	+	srrA	Synpcc7942_2417	0.45	-1.1
2,489,883	-	srrA	Synpcc7942_2417	0.45	+2.2
2,489,897	-	srrA	Synpcc7942_2417	0.46	+0.8
2,489,905	-	srrA	Synpcc7942_2417	0.47	+0.3
2,489,917	+	srrA	Synpcc7942_2417	0.48	+0.9
2,489,919	+	srrA	Synpcc7942_2417	0.48	-0.1
2,489,925	-	srrA	Synpcc7942_2417	0.48	+1.1
2,489,944	+	srrA	Synpcc7942_2417	0.50	+0.6
2,489,944	+	srrA	Synpcc7942_2417	0.50	-0.1
2,489,944	+	srrA	Synpcc7942_2417	0.50	-0.1
2,489,961	+				-0.1
2,489,962	+	srrA	Synpcc7942_2417	0.51	-0.7
2,489,971	+	srrA	Synpcc7942_2417	0.52	-1.4
2,489,979	-	srrA	Synpcc7942_2417	0.53	-1.4
2,489,986	+	srrA	Synpcc7942_2417	0.53	-0.6
2,489,986	+	srrA	Synpcc7942_2417	0.53	-2.1
2,489,993	-	srrA	Synpcc7942_2417	0.54	-0.1
2,489,994	-	srrA	Synpcc7942_2417	0.54	-0.1
2,490,012	+	srrA	Synpcc7942_2417	0.55	+2.8
2,490,020	-	srrA	Synpcc7942_2417	0.56	+0.1
2,490,100	+	srrA	Synpcc7942_2417	0.62	-1.1
2,490,110	-	srrA	Synpcc7942_2417	0.63	+0.9
2,490,212	-	srrA	Synpcc7942_2417	0.71	+1.6
2,490,219	-	srrA	Synpcc7942_2417	0.71	+2.5
2,490,234	+	srrA	Synpcc7942_2417	0.73	+0.5
2,490,234	+	srrA	Synpcc7942_2417	0.73	+0.9
2,490,239	+	srrA	Synpcc7942_2417	0.73	+1.5
2,490,242	-	srrA	Synpcc7942_2417	0.73	+0.9
2,490,242	-	srrA	Synpcc7942_2417	0.73	-0.1
2,490,242	-	srrA	Synpcc7942_2417	0.73	+0.0
2,490,242	-	srrA	Synpcc7942_2417	0.73	+0.9
2,490,265	-	srrA	Synpcc7942_2417	0.75	+1.5
2,490,265	-	srrA	Synpcc7942_2417	0.75	+1.7
2,490,267	-	srrA	Synpcc7942_2417	0.75	+1.1
2,490,379	-	srrA	Synpcc7942_2417	0.84	+0.7
2,490,404	-	srrA	Synpcc7942_2417	0.86	+0.2
2,490,435	+	srrA	Synpcc7942_2417	0.89	-2.4
2,490,510	+				-2.1
2,490,520	+				-0.7
2,490,520	+				-0.1
2,490,520	+				+0.8
2,490,520	+				+1.7
2,490,528	-				+0.1
2,490,536	+				-1.1
2,490,536	+				-0.7
2,490,544	-				+0.9
2,490,549	-				+2.5
2,490,573	+				-0.1
2,490,578	+				-2.1
2,490,578	+				+0.9
2,490,578	+				+1.5
2,490,586	-				+0.7
2,490,586	-				-1.1
2,490,586	-				-1.1
2,490,588	+				-0.1
2,490,589	+				-1.7
2,490,596	-				-2.7
2,490,596	-				-2.4
2,490,597	-				-1.1
2,490,607	-				-0.1
2,490,616	+				-0.1
2,490,616	+				+0.8
2,490,626	+				-2.1
2,490,631	+				+3.0
2,490,643	-				+0.5
2,490,661	+				+0.5
2,490,661	+				+1.9
2,490,707	-				+1.0
2,490,759	+	lrrA	Synpcc7942_2418	0.14	-2.1
2,490,759	+	lrrA	Synpcc7942_2418	0.14	+0.1
2,490,762	-	lrrA	Synpcc7942_2418	0.15	-2.1
2,490,764	+	lrrA	Synpcc7942_2418	0.15	+0.9
2,490,767	-	lrrA	Synpcc7942_2418	0.15	-0.1
2,490,767	-	lrrA	Synpcc7942_2418	0.15	-1.1
2,490,781	-	lrrA	Synpcc7942_2418	0.17	-1.1
2,490,819	+	lrrA	Synpcc7942_2418	0.21	-0.1
2,490,820	+	lrrA	Synpcc7942_2418	0.21	+0.2
2,490,820	+	lrrA	Synpcc7942_2418	0.21	-0.9
2,490,825	-	lrrA	Synpcc7942_2418	0.22	-1.1
2,490,826	-	lrrA	Synpcc7942_2418	0.22	-0.3
2,490,827	-	lrrA	Synpcc7942_2418	0.22	+1.5
2,490,827	-	lrrA	Synpcc7942_2418	0.22	+1.7
2,490,827	-	lrrA	Synpcc7942_2418	0.22	-0.7
2,490,827	-	lrrA	Synpcc7942_2418	0.22	-0.1
2,490,827	-	lrrA	Synpcc7942_2418	0.22	-0.9
2,490,827	-	lrrA	Synpcc7942_2418	0.22	-2.0
2,490,828	-	lrrA	Synpcc7942_2418	0.22	-1.7
2,490,838	-	lrrA	Synpcc7942_2418	0.23	-0.1
2,490,885	-	lrrA	Synpcc7942_2418	0.28	-0.9
2,490,924	+	lrrA	Synpcc7942_2418	0.33	+1.7
2,490,932	+	lrrA	Synpcc7942_2418	0.34	-0.3
2,490,937	+	lrrA	Synpcc7942_2418	0.34	+0.6
2,490,939	+	lrrA	Synpcc7942_2418	0.35	-2.4
2,490,939	+	lrrA	Synpcc7942_2418	0.35	+2.8
2,490,939	+	lrrA	Synpcc7942_2418	0.35	+2.4
2,490,939	+	lrrA	Synpcc7942_2418	0.35	+1.3
2,490,940	-	lrrA	Synpcc7942_2418	0.35	-2.7
2,490,947	-	lrrA	Synpcc7942_2418	0.35	+0.9
2,490,947	-	lrrA	Synpcc7942_2418	0.35	-2.4
2,490,961	+	lrrA	Synpcc7942_2418	0.37	+0.9
2,490,969	-	lrrA	Synpcc7942_2418	0.38	-1.7
2,490,971	+	lrrA	Synpcc7942_2418	0.38	-0.1
2,490,989	+	lrrA	Synpcc7942_2418	0.40	+1.5
2,490,990	+	lrrA	Synpcc7942_2418	0.40	-1.1
2,490,990	+	lrrA	Synpcc7942_2418	0.40	-1.7
2,490,993	+	lrrA	Synpcc7942_2418	0.41	+1.5
2,491,001	+	lrrA	Synpcc7942_2418	0.42	-1.4
2,491,006	+	lrrA	Synpcc7942_2418	0.42	-0.7
2,491,006	+	lrrA	Synpcc7942_2418	0.42	-1.1
2,491,008	+	lrrA	Synpcc7942_2418	0.42	-0.1
2,491,014	-	lrrA	Synpcc7942_2418	0.43	+0.5
2,491,033	-	lrrA	Synpcc7942_2418	0.45	+0.3
2,491,051	+	lrrA	Synpcc7942_2418	0.47	-0.1
2,491,085	+	lrrA	Synpcc7942_2418	0.51	+0.9
2,491,085	+	lrrA	Synpcc7942_2418	0.51	+0.5
2,491,090	+	lrrA	Synpcc7942_2418	0.52	-0.9
2,491,098	-	lrrA	Synpcc7942_2418	0.53	-0.1
2,491,118	+	lrrA	Synpcc7942_2418	0.55	+0.5
2,491,126	-	lrrA	Synpcc7942_2418	0.56	-0.1
2,491,126	-	lrrA	Synpcc7942_2418	0.56	-1.1
2,491,138	+	lrrA	Synpcc7942_2418	0.57	+0.5
2,491,148	+	lrrA	Synpcc7942_2418	0.58	+0.5
2,491,160	+	lrrA	Synpcc7942_2418	0.60	+0.9
2,491,165	+	lrrA	Synpcc7942_2418	0.60	+0.4
2,491,173	-	lrrA	Synpcc7942_2418	0.61	+0.7
2,491,208	-	lrrA	Synpcc7942_2418	0.65	+0.4
2,491,209	+	lrrA	Synpcc7942_2418	0.65	-1.7
2,491,217	-	lrrA	Synpcc7942_2418	0.66	+0.9
2,491,219	-	lrrA	Synpcc7942_2418	0.66	-1.7
2,491,227	-	lrrA	Synpcc7942_2418	0.67	+1.6
2,491,232	-	lrrA	Synpcc7942_2418	0.68	-0.1
2,491,275	-	lrrA	Synpcc7942_2418	0.73	+0.6
2,491,285	+	lrrA	Synpcc7942_2418	0.74	-1.1
2,491,285	+	lrrA	Synpcc7942_2418	0.74	-0.9
2,491,290	+	lrrA	Synpcc7942_2418	0.74	+0.9
2,491,291	-				+1.5
2,491,293	-	lrrA	Synpcc7942_2418	0.75	-0.1
2,491,349	+	lrrA	Synpcc7942_2418	0.81	-0.1
2,491,354	+	lrrA	Synpcc7942_2418	0.81	+0.2
2,491,354	+	lrrA	Synpcc7942_2418	0.81	+0.9
2,491,357	-	lrrA	Synpcc7942_2418	0.82	+1.5
2,491,369	+	lrrA	Synpcc7942_2418	0.83	-1.7
2,491,381	+	lrrA	Synpcc7942_2418	0.85	-0.5