Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2174

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,252,951	+				+0.5
2,252,951	+				-0.1
2,252,951	+				-2.7
2,252,958	+				-3.5
2,252,959	-				-1.1
2,252,959	-				-2.4
2,252,986	+				-1.1
2,253,048	+		Synpcc7942_2172	0.33	-2.2
2,253,059	+		Synpcc7942_2172	0.38	-2.1
2,253,119	+		Synpcc7942_2172	0.61	-1.1
2,253,127	-		Synpcc7942_2172	0.64	+0.9
2,253,181	+		Synpcc7942_2172	0.84	+0.5
2,253,234	+				-1.6
2,253,242	-				-2.1
2,253,242	-				-2.4
2,253,247	-				-0.1
2,253,312	-	idiC	Synpcc7942_2173	0.17	-2.4
2,253,319	+	idiC	Synpcc7942_2173	0.18	+0.5
2,253,334	-	idiC	Synpcc7942_2173	0.21	-0.1
2,253,353	+	idiC	Synpcc7942_2173	0.24	-0.1
2,253,355	-	idiC	Synpcc7942_2173	0.24	-0.5
2,253,394	-	idiC	Synpcc7942_2173	0.31	-2.4
2,253,420	+	idiC	Synpcc7942_2173	0.36	+0.9
2,253,420	+	idiC	Synpcc7942_2173	0.36	+0.9
2,253,447	-	idiC	Synpcc7942_2173	0.41	-2.6
2,253,482	+	idiC	Synpcc7942_2173	0.47	-1.3
2,253,492	+	idiC	Synpcc7942_2173	0.49	-1.1
2,253,604	+	idiC	Synpcc7942_2173	0.69	-1.9
2,253,654	-	idiC	Synpcc7942_2173	0.78	-1.4
2,253,673	-	idiC	Synpcc7942_2173	0.81	-2.5
2,253,683	-	idiC	Synpcc7942_2173	0.83	-2.1
2,253,700	-	idiC	Synpcc7942_2173	0.86	+0.5
2,253,735	-				+0.9
2,253,818	-				-0.1
2,253,908	+				-0.1
2,253,908	+				+1.4
2,253,916	-				-1.4
2,253,916	-				-0.3
2,253,916	-				-2.1
2,253,918	+				-1.3
2,254,018	-	idiB	Synpcc7942_2174	0.23	-1.4
2,254,065	-	idiB	Synpcc7942_2174	0.30	-0.5
2,254,071	+	idiB	Synpcc7942_2174	0.31	-2.1
2,254,086	+	idiB	Synpcc7942_2174	0.33	-3.5
2,254,100	-	idiB	Synpcc7942_2174	0.36	-2.1
2,254,172	+	idiB	Synpcc7942_2174	0.47	-1.6
2,254,172	+	idiB	Synpcc7942_2174	0.47	-3.1
2,254,180	-	idiB	Synpcc7942_2174	0.48	-0.8
2,254,180	-	idiB	Synpcc7942_2174	0.48	-0.9
2,254,181	+	idiB	Synpcc7942_2174	0.49	-1.4
2,254,186	+	idiB	Synpcc7942_2174	0.49	-0.1
2,254,189	-	idiB	Synpcc7942_2174	0.50	+1.9
2,254,190	-	idiB	Synpcc7942_2174	0.50	-2.9
2,254,194	+	idiB	Synpcc7942_2174	0.51	-1.1
2,254,202	-	idiB	Synpcc7942_2174	0.52	-0.6
2,254,228	+	idiB	Synpcc7942_2174	0.56	+0.9
2,254,228	+	idiB	Synpcc7942_2174	0.56	-1.6
2,254,236	-	idiB	Synpcc7942_2174	0.57	-1.6
2,254,236	-	idiB	Synpcc7942_2174	0.57	-1.1
2,254,236	-	idiB	Synpcc7942_2174	0.57	-1.6
2,254,253	+	idiB	Synpcc7942_2174	0.60	+1.9
2,254,303	+	idiB	Synpcc7942_2174	0.68	-1.1
2,254,333	-	idiB	Synpcc7942_2174	0.73	-1.1
2,254,342	+	idiB	Synpcc7942_2174	0.74	-0.1
2,254,416	-	idiB	Synpcc7942_2174	0.86	-2.6
2,254,469	+				-3.1
2,254,521	-				-0.3
2,254,546	+				-0.1
2,254,586	-				-0.6
2,254,626	-				-0.1
2,254,706	-				-1.5
2,254,706	-				-0.1
2,254,710	+				-0.1
2,254,712	+				+0.6
2,254,720	-				-0.1
2,254,720	-				-1.4
2,254,720	-				-2.4
2,254,751	-				-3.3
2,254,806	-				-1.6
2,254,845	-				+0.9
2,254,870	-	idiA	Synpcc7942_2175	0.11	-3.5
2,254,878	+	idiA	Synpcc7942_2175	0.12	-1.6
2,254,892	+	idiA	Synpcc7942_2175	0.13	-0.1
2,254,903	+	idiA	Synpcc7942_2175	0.14	-2.1
2,254,958	+	idiA	Synpcc7942_2175	0.19	-1.6
2,254,958	-	idiA	Synpcc7942_2175	0.19	-2.1
2,254,958	-	idiA	Synpcc7942_2175	0.19	+0.4
2,254,960	+	idiA	Synpcc7942_2175	0.19	-2.4
2,255,009	+	idiA	Synpcc7942_2175	0.24	-1.1
2,255,167	+	idiA	Synpcc7942_2175	0.38	-2.4
2,255,194	+	idiA	Synpcc7942_2175	0.41	-0.1
2,255,202	-	idiA	Synpcc7942_2175	0.41	-1.4
2,255,202	-	idiA	Synpcc7942_2175	0.41	+0.9
2,255,234	+	idiA	Synpcc7942_2175	0.44	-0.1
2,255,242	-	idiA	Synpcc7942_2175	0.45	-1.6
2,255,272	+				-0.1
2,255,279	-	idiA	Synpcc7942_2175	0.48	-1.6
2,255,283	+	idiA	Synpcc7942_2175	0.49	-2.6
2,255,283	+	idiA	Synpcc7942_2175	0.49	+3.3
2,255,324	-	idiA	Synpcc7942_2175	0.52	-1.1
2,255,334	-	idiA	Synpcc7942_2175	0.53	-0.1
2,255,339	+	idiA	Synpcc7942_2175	0.54	-3.1
2,255,341	+	idiA	Synpcc7942_2175	0.54	+0.9
2,255,360	-	idiA	Synpcc7942_2175	0.56	-2.4
2,255,380	-	idiA	Synpcc7942_2175	0.57	-0.1
2,255,396	+	idiA	Synpcc7942_2175	0.59	-1.6
2,255,396	+	idiA	Synpcc7942_2175	0.59	-2.1
2,255,404	-	idiA	Synpcc7942_2175	0.60	-0.1
2,255,406	+	idiA	Synpcc7942_2175	0.60	+0.5
2,255,406	+	idiA	Synpcc7942_2175	0.60	-0.6
2,255,427	-	idiA	Synpcc7942_2175	0.62	-0.1
2,255,458	-	idiA	Synpcc7942_2175	0.65	-0.1
2,255,460	+	idiA	Synpcc7942_2175	0.65	-2.2
2,255,499	-	idiA	Synpcc7942_2175	0.68	-1.6
2,255,500	+	idiA	Synpcc7942_2175	0.68	-1.1
2,255,500	+	idiA	Synpcc7942_2175	0.68	-1.4
2,255,500	+				-1.6