Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2167

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,247,045	-				-0.1
2,247,081	+		Synpcc7942_2165	0.24	+0.9
2,247,087	+		Synpcc7942_2165	0.26	-0.1
2,247,094	+		Synpcc7942_2165	0.28	-1.6
2,247,094	+		Synpcc7942_2165	0.28	-0.1
2,247,094	+		Synpcc7942_2165	0.28	+1.5
2,247,094	+		Synpcc7942_2165	0.28	-1.1
2,247,102	-		Synpcc7942_2165	0.30	-0.1
2,247,102	-		Synpcc7942_2165	0.30	-0.3
2,247,102	-		Synpcc7942_2165	0.30	+0.5
2,247,102	-		Synpcc7942_2165	0.30	+2.4
2,247,182	-		Synpcc7942_2165	0.51	+0.3
2,247,193	+		Synpcc7942_2165	0.54	+1.7
2,247,193	-		Synpcc7942_2165	0.54	+0.9
2,247,193	-		Synpcc7942_2165	0.54	-1.1
2,247,203	-		Synpcc7942_2165	0.56	-0.1
2,247,216	+		Synpcc7942_2165	0.60	+0.4
2,247,224	-		Synpcc7942_2165	0.62	+0.4
2,247,226	+		Synpcc7942_2165	0.62	-0.1
2,247,233	+		Synpcc7942_2165	0.64	-0.1
2,247,240	+		Synpcc7942_2165	0.66	-1.1
2,247,248	-		Synpcc7942_2165	0.68	-1.6
2,247,248	-		Synpcc7942_2165	0.68	+0.9
2,247,248	-		Synpcc7942_2165	0.68	+1.9
2,247,270	-		Synpcc7942_2165	0.74	+0.7
2,247,297	-		Synpcc7942_2165	0.81	+1.5
2,247,307	+		Synpcc7942_2165	0.83	-0.1
2,247,315	-		Synpcc7942_2165	0.86	-2.1
2,247,329	+		Synpcc7942_2165	0.89	-3.2
2,247,331	-		Synpcc7942_2165	0.90	+0.5
2,247,333	+				-1.6
2,247,357	+				+1.5
2,247,365	-				-0.1
2,247,401	+				+0.9
2,247,401	+				+0.7
2,247,409	-				+1.5
2,247,409	-				-1.1
2,247,409	-				+1.3
2,247,413	+				+0.9
2,247,413	+				-0.1
2,247,421	-				-1.1
2,247,421	-				+1.9
2,247,421	-				+4.5
2,247,421	-				+0.9
2,247,421	-				-1.1
2,247,431	-				-0.6
2,247,468	+				-0.8
2,247,469	+				-0.1
2,247,494	-				+0.5
2,247,567	+		Synpcc7942_2166	0.22	-0.6
2,247,567	+		Synpcc7942_2166	0.22	+1.7
2,247,567	+		Synpcc7942_2166	0.22	+0.7
2,247,567	+				+0.9
2,247,575	-		Synpcc7942_2166	0.24	-1.9
2,247,575	-		Synpcc7942_2166	0.24	-1.1
2,247,575	-		Synpcc7942_2166	0.24	+1.3
2,247,575	-		Synpcc7942_2166	0.24	+0.3
2,247,581	-		Synpcc7942_2166	0.26	+1.3
2,247,602	-		Synpcc7942_2166	0.31	+1.2
2,247,609	+		Synpcc7942_2166	0.33	+0.9
2,247,615	+				-0.1
2,247,623	+		Synpcc7942_2166	0.37	+0.9
2,247,623	+		Synpcc7942_2166	0.37	-0.1
2,247,623	+		Synpcc7942_2166	0.37	+0.4
2,247,631	-		Synpcc7942_2166	0.39	+1.3
2,247,631	-		Synpcc7942_2166	0.39	+0.8
2,247,631	-		Synpcc7942_2166	0.39	-1.1
2,247,653	-		Synpcc7942_2166	0.45	+0.5
2,247,655	+		Synpcc7942_2166	0.45	+1.5
2,247,663	-		Synpcc7942_2166	0.48	-0.1
2,247,719	-		Synpcc7942_2166	0.63	+1.5
2,247,728	-		Synpcc7942_2166	0.65	-0.8
2,247,730	+		Synpcc7942_2166	0.66	+0.9
2,247,730	+		Synpcc7942_2166	0.66	-1.1
2,247,730	+		Synpcc7942_2166	0.66	+0.4
2,247,730	+		Synpcc7942_2166	0.66	-1.1
2,247,730	+		Synpcc7942_2166	0.66	+0.7
2,247,730	+		Synpcc7942_2166	0.66	+1.5
2,247,738	+		Synpcc7942_2166	0.68	-1.1
2,247,738	-		Synpcc7942_2166	0.68	-0.2
2,247,738	-		Synpcc7942_2166	0.68	-0.9
2,247,738	-		Synpcc7942_2166	0.68	+2.3
2,247,738	-		Synpcc7942_2166	0.68	-0.9
2,247,738	-		Synpcc7942_2166	0.68	+1.2
2,247,738	-		Synpcc7942_2166	0.68	-1.4
2,247,738	-		Synpcc7942_2166	0.68	+1.1
2,247,739	+				+0.5
2,247,739	+		Synpcc7942_2166	0.68	-0.5
2,247,745	-		Synpcc7942_2166	0.70	+0.7
2,247,746	-		Synpcc7942_2166	0.70	-0.1
2,247,747	-		Synpcc7942_2166	0.70	-0.1
2,247,763	+		Synpcc7942_2166	0.74	+0.5
2,247,765	+		Synpcc7942_2166	0.75	+0.9
2,247,768	-		Synpcc7942_2166	0.76	+0.5
2,247,771	-		Synpcc7942_2166	0.77	+0.8
2,247,804	+		Synpcc7942_2166	0.85	-0.8
2,247,805	+		Synpcc7942_2166	0.86	+0.7
2,247,809	+		Synpcc7942_2166	0.87	-0.5
2,247,869	-				-0.1
2,247,873	-				+0.3
2,247,874	-				-1.2
2,247,879	+				-1.1
2,247,899	+				+1.5
2,247,902	-				-1.1
2,247,904	-				+0.9
2,247,916	+				-0.1
2,247,916	+				+1.1
2,247,924	-				+0.2
2,247,940	-				-0.8
2,247,940	-				+0.4
2,247,952	+				+0.9
2,247,952	+				-0.2
2,247,952	+				+0.3
2,247,974	-				-0.1
2,247,984	-				+1.5
2,247,986	+				-1.6
2,247,986	+				-2.1
2,248,023	+				-1.4
2,248,102	+		Synpcc7942_2167	0.19	+0.5
2,248,102	+		Synpcc7942_2167	0.19	+1.5
2,248,132	+		Synpcc7942_2167	0.26	-1.6
2,248,135	-		Synpcc7942_2167	0.26	-1.1
2,248,140	-		Synpcc7942_2167	0.27	+0.9
2,248,156	+		Synpcc7942_2167	0.31	-0.1
2,248,163	+		Synpcc7942_2167	0.32	-0.1
2,248,205	-		Synpcc7942_2167	0.42	-1.1
2,248,209	+		Synpcc7942_2167	0.43	+1.5
2,248,212	-				-0.1
2,248,224	-		Synpcc7942_2167	0.46	-2.3
2,248,226	+		Synpcc7942_2167	0.46	+1.5
2,248,276	+		Synpcc7942_2167	0.57	-2.6
2,248,284	-		Synpcc7942_2167	0.59	+0.9
2,248,305	+		Synpcc7942_2167	0.64	+0.4
2,248,352	+		Synpcc7942_2167	0.74	+0.5
2,248,362	+		Synpcc7942_2167	0.76	+0.5
2,248,362	-		Synpcc7942_2167	0.76	-0.1
2,248,369	-		Synpcc7942_2167	0.78	-0.5
2,248,370	-		Synpcc7942_2167	0.78	-1.4
2,248,370	-		Synpcc7942_2167	0.78	-2.4
2,248,371	+		Synpcc7942_2167	0.78	-1.1
2,248,371	+		Synpcc7942_2167	0.78	+0.4
2,248,376	+		Synpcc7942_2167	0.79	-0.1
2,248,376	+		Synpcc7942_2167	0.79	+0.8
2,248,376	+		Synpcc7942_2167	0.79	-1.5
2,248,379	-		Synpcc7942_2167	0.80	+0.9
2,248,399	+		Synpcc7942_2167	0.85	-1.6
2,248,399	+		Synpcc7942_2167	0.85	+0.9
2,248,407	-		Synpcc7942_2167	0.86	+2.3
2,248,445	-				-1.1
2,248,523	+				+0.5
2,248,528	+				-0.1
2,248,550	-				+1.9
2,248,593	-				+0.5
2,248,598	+				+0.3
2,248,599	+				-1.4
2,248,604	+				-0.1
2,248,612	-				+0.5
2,248,620	+				-1.6
2,248,632	+				-0.1
2,248,633	-				+0.3
2,248,650	+				-1.6
2,248,653	+				-0.1
2,248,704	+				-2.1
2,248,712	-				-1.1