Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1996

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,064,621	-	masA	Synpcc7942_1994	0.62	+1.0
2,064,655	+				+1.0
2,064,655	+	masA	Synpcc7942_1994	0.66	-0.8
2,064,658	-	masA	Synpcc7942_1994	0.67	+1.0
2,064,663	-	masA	Synpcc7942_1994	0.67	+1.5
2,064,670	-	masA	Synpcc7942_1994	0.68	-1.6
2,064,691	+	masA	Synpcc7942_1994	0.71	-1.4
2,064,742	-				-0.0
2,064,770	+	masA	Synpcc7942_1994	0.82	-0.0
2,064,791	-	masA	Synpcc7942_1994	0.85	-1.0
2,064,810	+	masA	Synpcc7942_1994	0.88	-0.4
2,064,826	+				-1.6
2,064,826	+				-0.0
2,064,826	+				-0.0
2,064,845	-				+1.1
2,064,871	-				+0.2
2,064,878	-				-0.6
2,064,918	+				-0.0
2,065,596	-				-0.0
2,065,597	-				-0.0
2,065,625	+				+1.5
2,065,625	+				-0.0
2,065,635	-				-0.0
2,065,679	-		Synpcc7942_1996	0.18	-3.2
2,065,686	-		Synpcc7942_1996	0.20	-1.0
2,065,704	-		Synpcc7942_1996	0.25	-2.5
2,065,717	+		Synpcc7942_1996	0.28	-1.0
2,065,754	+		Synpcc7942_1996	0.39	-2.4
2,065,756	+		Synpcc7942_1996	0.40	-0.0
2,065,763	-		Synpcc7942_1996	0.42	-1.6
2,065,789	+		Synpcc7942_1996	0.49	-2.0
2,065,831	-		Synpcc7942_1996	0.61	-2.6
2,065,831	-		Synpcc7942_1996	0.61	-0.0
2,065,844	-		Synpcc7942_1996	0.65	-1.0
2,065,893	+		Synpcc7942_1996	0.79	-2.6
2,065,902	-		Synpcc7942_1996	0.81	-0.0
2,065,941	-				-3.2
2,065,971	+				-0.0
2,065,981	+				-0.0
2,066,096	+				-1.0
2,066,113	+				-0.8
2,066,133	+				-0.0
2,066,133	+				+0.5
2,066,141	-				-0.9
2,066,149	+				-1.6
2,066,212	+	hliA	Synpcc7942_1997	0.27	+1.0
2,066,245	+	hliA	Synpcc7942_1997	0.42	-0.0
2,066,463	+				+1.9
2,066,532	-				-0.5
2,066,539	-				+4.5
2,066,539	-				-1.6
2,066,552	+				+3.1
2,066,552	+				+1.0
2,066,594	+				-0.8
2,066,625	+		Synpcc7942_1998	0.12	-1.0
2,066,625	+		Synpcc7942_1998	0.12	-1.4
2,066,625	+		Synpcc7942_1998	0.12	+1.8
2,066,630	+		Synpcc7942_1998	0.13	-0.0
2,066,633	-		Synpcc7942_1998	0.13	-0.0
2,066,633	-		Synpcc7942_1998	0.13	+1.3
2,066,635	+		Synpcc7942_1998	0.13	-0.0
2,066,641	-		Synpcc7942_1998	0.14	+2.0
2,066,641	-		Synpcc7942_1998	0.14	+0.5
2,066,643	-		Synpcc7942_1998	0.15	+1.5
2,066,657	+		Synpcc7942_1998	0.17	+0.5
2,066,681	+		Synpcc7942_1998	0.21	+0.5
2,066,689	+				+3.1
2,066,712	-		Synpcc7942_1998	0.27	-0.0
2,066,723	-		Synpcc7942_1998	0.28	-0.5
2,066,739	-		Synpcc7942_1998	0.31	+1.8
2,066,744	-		Synpcc7942_1998	0.32	-0.9
2,066,749	-		Synpcc7942_1998	0.33	+2.3
2,066,762	-		Synpcc7942_1998	0.35	+1.3
2,066,789	+		Synpcc7942_1998	0.40	-0.6
2,066,797	-		Synpcc7942_1998	0.41	+2.3
2,066,810	+		Synpcc7942_1998	0.43	-2.0
2,066,813	-		Synpcc7942_1998	0.44	+2.1
2,066,830	+		Synpcc7942_1998	0.47	+0.5
2,066,836	-		Synpcc7942_1998	0.48	-0.0
2,066,850	+		Synpcc7942_1998	0.50	+1.8
2,066,875	+		Synpcc7942_1998	0.54	-2.6
2,066,876	+		Synpcc7942_1998	0.54	+1.5
2,066,881	+		Synpcc7942_1998	0.55	+1.5
2,066,889	-		Synpcc7942_1998	0.57	-1.6
2,066,892	+		Synpcc7942_1998	0.57	+2.3
2,066,901	+		Synpcc7942_1998	0.59	-0.0
2,066,929	-		Synpcc7942_1998	0.63	+0.4