Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1968

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,037,701	-				-0.0
2,037,777	-				-1.6
2,037,791	-				-1.6
2,038,648	+				-0.0
2,038,690	-				-0.6
2,038,699	+				-2.0
2,038,731	-				-0.0
2,038,818	+				-1.3
2,038,843	-		Synpcc7942_1968	0.12	-2.0
2,038,915	-		Synpcc7942_1968	0.17	-2.4
2,038,942	+		Synpcc7942_1968	0.19	-1.0
2,038,948	-		Synpcc7942_1968	0.19	-1.0
2,038,950	+		Synpcc7942_1968	0.19	-3.5
2,038,950	-		Synpcc7942_1968	0.19	-1.0
2,038,997	-		Synpcc7942_1968	0.23	-0.0
2,039,021	-		Synpcc7942_1968	0.25	-0.6
2,039,041	-		Synpcc7942_1968	0.26	-2.5
2,039,055	-		Synpcc7942_1968	0.27	-0.0
2,039,064	+		Synpcc7942_1968	0.28	-1.6
2,039,087	-		Synpcc7942_1968	0.30	-1.0
2,039,094	+		Synpcc7942_1968	0.30	-0.0
2,039,122	-		Synpcc7942_1968	0.32	-3.2
2,039,132	+		Synpcc7942_1968	0.33	-3.0
2,039,132	+				-0.0
2,039,142	+		Synpcc7942_1968	0.34	-1.6
2,039,151	+		Synpcc7942_1968	0.34	-1.0
2,039,195	-		Synpcc7942_1968	0.38	+1.0
2,039,219	-		Synpcc7942_1968	0.39	-2.2
2,039,256	+		Synpcc7942_1968	0.42	-0.0
2,039,261	+		Synpcc7942_1968	0.42	-2.0
2,039,269	-		Synpcc7942_1968	0.43	-0.0
2,039,271	+		Synpcc7942_1968	0.43	-1.0
2,039,279	-		Synpcc7942_1968	0.44	-0.0
2,039,302	+		Synpcc7942_1968	0.45	-1.0
2,039,307	-		Synpcc7942_1968	0.46	-1.0
2,039,349	+		Synpcc7942_1968	0.49	+1.0
2,039,373	+		Synpcc7942_1968	0.51	-1.0
2,039,455	+		Synpcc7942_1968	0.57	-1.0
2,039,481	+		Synpcc7942_1968	0.59	-1.0
2,039,486	+		Synpcc7942_1968	0.59	-1.0
2,039,486	+		Synpcc7942_1968	0.59	-1.0
2,039,494	-		Synpcc7942_1968	0.60	-0.8
2,039,521	-		Synpcc7942_1968	0.62	-0.0
2,039,590	-		Synpcc7942_1968	0.67	-1.4
2,039,611	-		Synpcc7942_1968	0.68	-1.7
2,039,613	+		Synpcc7942_1968	0.68	-2.6
2,039,642	+		Synpcc7942_1968	0.70	-1.0
2,039,650	+		Synpcc7942_1968	0.71	-2.9
2,039,673	+		Synpcc7942_1968	0.73	-0.0
2,039,677	+		Synpcc7942_1968	0.73	-1.4
2,039,709	+		Synpcc7942_1968	0.75	-0.0
2,039,717	+		Synpcc7942_1968	0.76	-1.0
2,039,720	+		Synpcc7942_1968	0.76	-2.9
2,039,720	+		Synpcc7942_1968	0.76	-0.0
2,039,728	-		Synpcc7942_1968	0.77	-1.6
2,039,728	-		Synpcc7942_1968	0.77	-1.0
2,039,731	+		Synpcc7942_1968	0.77	-2.4
2,039,731	+		Synpcc7942_1968	0.77	-0.6
2,039,731	+		Synpcc7942_1968	0.77	-1.6
2,039,731	+		Synpcc7942_1968	0.77	-1.0
2,039,741	+		Synpcc7942_1968	0.78	-2.6
2,039,741	+		Synpcc7942_1968	0.78	-2.0
2,039,747	+		Synpcc7942_1968	0.78	-1.6
2,039,748	+		Synpcc7942_1968	0.78	-1.6
2,039,750	+		Synpcc7942_1968	0.78	-2.0
2,039,755	+		Synpcc7942_1968	0.79	-0.9
2,039,755	+		Synpcc7942_1968	0.79	-2.0
2,039,755	+		Synpcc7942_1968	0.79	-0.6
2,039,755	+		Synpcc7942_1968	0.79	+1.0
2,039,756	-		Synpcc7942_1968	0.79	-0.6
2,039,756	-		Synpcc7942_1968	0.79	-1.6
2,039,756	-		Synpcc7942_1968	0.79	+1.0
2,039,756	-		Synpcc7942_1968	0.79	-2.0
2,039,764	+		Synpcc7942_1968	0.79	-1.6
2,039,768	-		Synpcc7942_1968	0.80	+1.0
2,039,779	+		Synpcc7942_1968	0.81	-1.0
2,039,797	-		Synpcc7942_1968	0.82	-1.6
2,039,797	-		Synpcc7942_1968	0.82	-2.4
2,039,797	-		Synpcc7942_1968	0.82	-1.6
2,039,818	-		Synpcc7942_1968	0.83	-1.7
2,039,823	-		Synpcc7942_1968	0.84	-0.0
2,039,827	+		Synpcc7942_1968	0.84	-1.0
2,039,830	-		Synpcc7942_1968	0.84	-0.0
2,039,830	-		Synpcc7942_1968	0.84	-0.0
2,039,872	+		Synpcc7942_1968	0.87	-0.0
2,039,872	+		Synpcc7942_1968	0.87	-1.0
2,039,880	-		Synpcc7942_1968	0.88	-2.0
2,039,880	-		Synpcc7942_1968	0.88	-1.0
2,039,880	-		Synpcc7942_1968	0.88	-1.6
2,039,880	-		Synpcc7942_1968	0.88	-1.6
2,039,923	-				-1.0
2,039,986	-				-2.0
2,040,029	+				-1.4
2,040,037	-				-1.0
2,040,037	-				+2.5
2,040,040	+				-0.2
2,040,111	+				-1.0
2,040,111	+				+1.5
2,040,111	+				+1.0
2,040,111	+				+1.0
2,040,111	+				+1.0
2,040,111	+				+0.4
2,040,111	+				-0.0
2,040,119	-				+1.4
2,040,119	-				+1.0
2,040,119	-				+1.8
2,040,119	-				-0.0
2,040,214	-				+0.7
2,040,260	-				-0.5
2,040,315	-				+1.3
2,040,476	-				-0.0
2,040,615	+		Synpcc7942_1969	0.37	+1.0
2,040,633	-		Synpcc7942_1969	0.42	-1.6
2,040,661	+		Synpcc7942_1969	0.49	-0.0
2,040,697	-		Synpcc7942_1969	0.59	+2.0
2,040,745	-		Synpcc7942_1969	0.72	-1.0
2,040,914	-				-1.6
2,040,941	-				+0.5
2,040,943	+				+0.5
2,040,963	-				+1.4
2,040,996	-				+1.2
2,041,043	-				+0.2