Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1949

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
2,023,092	+		Synpcc7942_1947	0.69	-1.0
2,023,092	+		Synpcc7942_1947	0.69	+0.4
2,023,100	-		Synpcc7942_1947	0.70	+2.7
2,023,100	-		Synpcc7942_1947	0.70	+2.1
2,023,100	-		Synpcc7942_1947	0.70	+1.2
2,023,169	-		Synpcc7942_1947	0.74	+1.5
2,023,183	+		Synpcc7942_1947	0.75	+1.5
2,023,191	-		Synpcc7942_1947	0.76	+1.7
2,023,226	-		Synpcc7942_1947	0.78	+0.8
2,023,234	-		Synpcc7942_1947	0.79	+2.8
2,023,241	+		Synpcc7942_1947	0.79	+1.7
2,023,241	-		Synpcc7942_1947	0.79	+0.8
2,023,283	+		Synpcc7942_1947	0.82	+1.7
2,023,283	+		Synpcc7942_1947	0.82	+1.0
2,023,306	+		Synpcc7942_1947	0.84	+0.7
2,023,309	+		Synpcc7942_1947	0.84	+2.5
2,023,366	+		Synpcc7942_1947	0.88	+2.9
2,023,367	+		Synpcc7942_1947	0.88	-1.0
2,023,374	-		Synpcc7942_1947	0.88	+1.5
2,023,374	-		Synpcc7942_1947	0.88	+0.5
2,023,375	-		Synpcc7942_1947	0.89	+0.5
2,023,405	-				+1.3
2,023,476	-				-0.6
2,023,481	+				+1.8
2,023,524	-				-1.6
2,023,566	-				+2.0
2,023,575	+				+1.3
2,023,580	+				+1.0
2,023,580	+				-1.0
2,023,580	+				-0.2
2,023,580	+				-0.0
2,023,580	+				+1.0
2,023,580	+				-1.0
2,023,580	+				-2.6
2,023,582	+				-1.9
2,023,588	-				-1.6
2,023,601	-				-2.0
2,023,601	-				-1.0
2,023,610	+				+0.5
2,023,649	-				-0.0
2,023,688	+				+0.6
2,023,729	+		Synpcc7942_1948	0.14	-1.6
2,023,777	-		Synpcc7942_1948	0.34	+2.0
2,023,800	+		Synpcc7942_1948	0.43	-2.9
2,023,962	+				-1.1
2,023,963	-				-0.0
2,023,963	-				-0.6
2,023,967	+				-1.6
2,023,967	+				-1.0
2,023,967	+				+1.0
2,023,967	+				-2.0
2,023,967	+				+0.6
2,023,967	+				-0.6
2,023,975	-				-2.9
2,023,975	-				+1.0
2,023,975	-				-1.0
2,023,975	-				-0.6
2,023,975	-				-1.0
2,023,975	-				-1.4
2,023,997	-				-1.0
2,024,000	+				-0.0
2,024,000	+				-1.0
2,024,008	-				-0.5
2,024,013	-				-0.2
2,024,022	-				-0.0
2,024,252	+		Synpcc7942_1949	0.81	-1.4
2,024,252	+		Synpcc7942_1949	0.81	-0.0
2,024,260	-		Synpcc7942_1949	0.83	-1.4
2,024,268	-		Synpcc7942_1949	0.86	-0.0
2,024,317	+				-0.4
2,024,326	-				-0.0
2,024,334	-				+1.2
2,024,373	-				+1.0
2,024,507	-		Synpcc7942_1950	0.47	-1.0
2,024,560	-		Synpcc7942_1950	0.68	+1.5
2,024,683	+				+2.3
2,024,693	-				-0.0
2,024,735	-				-0.0
2,024,773	-				+1.0
2,024,786	+				-1.3
2,024,786	+				+2.0
2,024,793	-				+0.6
2,024,795	+				-1.1
2,024,813	+				+1.0
2,024,813	+				+1.0
2,024,813	+				+1.2
2,024,821	-				+1.8
2,024,909	+		Synpcc7942_1951	0.22	-0.0
2,024,917	-		Synpcc7942_1951	0.25	+2.3
2,024,917	-		Synpcc7942_1951	0.25	-0.0
2,024,917	-		Synpcc7942_1951	0.25	+1.0
2,024,917	-		Synpcc7942_1951	0.25	+1.0
2,024,949	-		Synpcc7942_1951	0.33	+0.2
2,024,956	+		Synpcc7942_1951	0.35	-2.0
2,024,965	-		Synpcc7942_1951	0.38	+1.5
2,024,975	-		Synpcc7942_1951	0.40	+2.0
2,025,018	+		Synpcc7942_1951	0.52	-0.0
2,025,065	+		Synpcc7942_1951	0.65	-1.0
2,025,091	+		Synpcc7942_1951	0.72	-0.0
2,025,091	+		Synpcc7942_1951	0.72	+0.4
2,025,099	-		Synpcc7942_1951	0.75	-1.6
2,025,108	+		Synpcc7942_1951	0.77	-1.6
2,025,108	+		Synpcc7942_1951	0.77	+0.4
2,025,125	+		Synpcc7942_1951	0.82	-1.0
2,025,131	+		Synpcc7942_1951	0.83	-1.0
2,025,133	-		Synpcc7942_1951	0.84	-1.0
2,025,142	+		Synpcc7942_1951	0.87	-1.0
2,025,155	-				+0.4
2,025,156	+				-1.0
2,025,184	+				+2.0
2,025,193	-				-0.7
2,025,227	-				+0.3