Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1762

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
1,829,532	-				-1.1
1,829,534	-				-2.1
1,829,537	-				-0.4
1,829,542	+				-0.1
1,829,542	+				-1.1
1,829,542	+				+2.5
1,829,544	-				-1.1
1,829,550	-				-1.1
1,829,550	-				-0.1
1,829,550	-				-1.1
1,829,550	-				+2.3
1,829,550	-				-0.1
1,829,550	-				+1.0
1,829,550	-				+2.0
1,829,550	-				-1.1
1,829,561	+				-0.1
1,829,561	+				-1.1
1,829,576	-				-1.7
1,829,592	+				+0.5
1,829,603	+				-1.1
1,829,605	-				+0.9
1,829,607	-				-1.1
1,829,629	+				-2.4
1,829,656	-				-0.1
1,829,663	+				-1.1
1,829,663	+				-1.7
1,829,671	-				-0.1
1,829,674	+				-1.1
1,829,674	+				-1.1
1,829,682	-				-1.1
1,829,682	-				-0.2
1,829,726	-		Synpcc7942_1762	0.10	-0.1
1,829,730	+		Synpcc7942_1762	0.11	-2.4
1,829,753	-		Synpcc7942_1762	0.12	-0.6
1,829,775	+		Synpcc7942_1762	0.14	-1.2
1,829,782	-		Synpcc7942_1762	0.14	-0.1
1,829,801	-		Synpcc7942_1762	0.15	-1.1
1,829,806	-		Synpcc7942_1762	0.16	-0.1
1,829,806	-		Synpcc7942_1762	0.16	-1.2
1,829,821	-		Synpcc7942_1762	0.17	-1.7
1,829,821	-		Synpcc7942_1762	0.17	-2.7
1,829,896	+		Synpcc7942_1762	0.22	-1.2
1,829,896	+		Synpcc7942_1762	0.22	-2.1
1,829,904	-		Synpcc7942_1762	0.23	+0.9
1,829,921	-		Synpcc7942_1762	0.24	-1.1
1,829,940	-		Synpcc7942_1762	0.25	-1.7
1,829,956	+		Synpcc7942_1762	0.26	-0.7
1,829,969	-		Synpcc7942_1762	0.27	-2.1
1,829,980	+		Synpcc7942_1762	0.28	-0.1
1,829,984	+		Synpcc7942_1762	0.28	+0.9
1,829,992	+		Synpcc7942_1762	0.29	-2.4
1,829,992	+		Synpcc7942_1762	0.29	+0.7
1,829,992	+		Synpcc7942_1762	0.29	-0.1
1,829,992	+		Synpcc7942_1762	0.29	-1.1
1,829,992	+		Synpcc7942_1762	0.29	-0.7
1,829,992	+		Synpcc7942_1762	0.29	-0.1
1,829,993	-		Synpcc7942_1762	0.29	+0.7
1,829,993	-				+2.5
1,829,993	-		Synpcc7942_1762	0.29	-1.7
1,830,000	+		Synpcc7942_1762	0.29	-1.1
1,830,000	-		Synpcc7942_1762	0.29	-1.1
1,830,005	-		Synpcc7942_1762	0.29	-0.3
1,830,005	-		Synpcc7942_1762	0.29	-0.7
1,830,005	-		Synpcc7942_1762	0.29	-1.1
1,830,005	-		Synpcc7942_1762	0.29	+0.5
1,830,007	-		Synpcc7942_1762	0.30	+1.5
1,830,019	+		Synpcc7942_1762	0.30	-1.7
1,830,025	+		Synpcc7942_1762	0.31	-1.1
1,830,053	+		Synpcc7942_1762	0.33	-1.7
1,830,055	-		Synpcc7942_1762	0.33	+0.5
1,830,058	+		Synpcc7942_1762	0.33	+1.2
1,830,091	+		Synpcc7942_1762	0.35	+0.9
1,830,098	-		Synpcc7942_1762	0.36	-0.1
1,830,099	-		Synpcc7942_1762	0.36	+1.0
1,830,099	-		Synpcc7942_1762	0.36	-2.1
1,830,172	+		Synpcc7942_1762	0.41	-1.9
1,830,182	+		Synpcc7942_1762	0.42	+0.9
1,830,189	+		Synpcc7942_1762	0.42	-1.3
1,830,196	+		Synpcc7942_1762	0.43	-0.1
1,830,196	+		Synpcc7942_1762	0.43	-2.1
1,830,222	+		Synpcc7942_1762	0.44	-1.7
1,830,228	+		Synpcc7942_1762	0.45	-2.1
1,830,254	-		Synpcc7942_1762	0.47	-0.1
1,830,265	+		Synpcc7942_1762	0.47	-2.4
1,830,265	+		Synpcc7942_1762	0.47	-1.1
1,830,275	+		Synpcc7942_1762	0.48	-4.0
1,830,278	-		Synpcc7942_1762	0.48	+0.9
1,830,328	-		Synpcc7942_1762	0.52	-0.8
1,830,350	-		Synpcc7942_1762	0.53	-2.4
1,830,399	+		Synpcc7942_1762	0.57	-1.1
1,830,399	+		Synpcc7942_1762	0.57	-0.3
1,830,399	+		Synpcc7942_1762	0.57	-1.7
1,830,406	+		Synpcc7942_1762	0.57	-1.5
1,830,407	-		Synpcc7942_1762	0.57	-1.1
1,830,416	+		Synpcc7942_1762	0.58	+0.9
1,830,416	+		Synpcc7942_1762	0.58	-1.1
1,830,424	-		Synpcc7942_1762	0.58	-1.4
1,830,433	-		Synpcc7942_1762	0.59	-0.1
1,830,458	-		Synpcc7942_1762	0.61	-0.1
1,830,488	+		Synpcc7942_1762	0.63	-1.7
1,830,488	+		Synpcc7942_1762	0.63	+0.1
1,830,496	-		Synpcc7942_1762	0.63	-2.4
1,830,496	-		Synpcc7942_1762	0.63	-1.1
1,830,576	+		Synpcc7942_1762	0.69	-1.4
1,830,586	+		Synpcc7942_1762	0.69	-1.1
1,830,586	+		Synpcc7942_1762	0.69	-3.3
1,830,586	+		Synpcc7942_1762	0.69	-1.1
1,830,615	-		Synpcc7942_1762	0.71	+0.3
1,830,682	-		Synpcc7942_1762	0.76	-0.1
1,830,686	-		Synpcc7942_1762	0.76	-0.1
1,830,766	+		Synpcc7942_1762	0.82	-1.1
1,830,788	+		Synpcc7942_1762	0.83	-0.1
1,830,866	-		Synpcc7942_1762	0.89	-0.6
1,830,899	-				-1.5
1,830,899	-				+0.1
1,830,902	+				-2.4
1,830,905	-				-1.3
1,830,905	-				-0.1
1,830,905	-				+0.9
1,830,912	+				-0.1
1,830,931	-				-3.2
1,830,960	-				-0.1
1,830,963	+				+1.3
1,830,963	+				-0.5
1,831,077	+				-1.9
1,831,077	+				-0.1
1,831,085	-				-1.1
1,831,118	+		Synpcc7942_1763	0.11	+0.2
1,831,176	+		Synpcc7942_1763	0.18	+0.3
1,831,176	+		Synpcc7942_1763	0.18	-0.1
1,831,176	+		Synpcc7942_1763	0.18	-1.7
1,831,176	+		Synpcc7942_1763	0.18	+1.7
1,831,176	+		Synpcc7942_1763	0.18	+0.7
1,831,183	-		Synpcc7942_1763	0.19	-0.7
1,831,184	-		Synpcc7942_1763	0.19	+0.5
1,831,184	-		Synpcc7942_1763	0.19	-0.8
1,831,198	+		Synpcc7942_1763	0.21	-1.1
1,831,262	+		Synpcc7942_1763	0.29	-1.1
1,831,307	+		Synpcc7942_1763	0.34	+0.5
1,831,315	-		Synpcc7942_1763	0.35	-0.1
1,831,354	+		Synpcc7942_1763	0.40	+0.4
1,831,414	+		Synpcc7942_1763	0.47	-0.1
1,831,444	+		Synpcc7942_1763	0.51	-0.9
1,831,452	-		Synpcc7942_1763	0.52	+0.7
1,831,452	-		Synpcc7942_1763	0.52	-1.1
1,831,452	-		Synpcc7942_1763	0.52	-0.5
1,831,452	-		Synpcc7942_1763	0.52	-1.7
1,831,470	+		Synpcc7942_1763	0.54	-0.1
1,831,493	-		Synpcc7942_1763	0.57	+2.4
1,831,498	-		Synpcc7942_1763	0.57	-1.7
1,831,510	+		Synpcc7942_1763	0.59	-0.8
1,831,510	+		Synpcc7942_1763	0.59	+1.5
1,831,541	+		Synpcc7942_1763	0.63	-0.7
1,831,567	-		Synpcc7942_1763	0.66	-1.7
1,831,583	+		Synpcc7942_1763	0.68	-0.7
1,831,618	+		Synpcc7942_1763	0.72	-0.4
1,831,621	-		Synpcc7942_1763	0.72	+0.9
1,831,621	-		Synpcc7942_1763	0.72	+0.3
1,831,621	-		Synpcc7942_1763	0.72	-2.1
1,831,630	+		Synpcc7942_1763	0.74	-1.1
1,831,638	-		Synpcc7942_1763	0.74	+0.5
1,831,658	-		Synpcc7942_1763	0.77	-0.1
1,831,687	+		Synpcc7942_1763	0.80	+0.5
1,831,705	+		Synpcc7942_1763	0.83	-1.7
1,831,794	+				-0.8
1,831,819	+				-0.5
1,831,819	+				-2.1
1,831,819	-				-0.1
1,831,832	+				-0.1
1,831,832	+				-0.8
1,831,843	+				-0.1
1,831,849	-				-0.1
1,831,916	-		Synpcc7942_1764	0.15	-0.1
1,831,921	-		Synpcc7942_1764	0.16	+1.5
1,831,964	-		Synpcc7942_1764	0.28	+0.8
1,831,978	+		Synpcc7942_1764	0.31	+0.9
1,831,978	+		Synpcc7942_1764	0.31	-0.1
1,831,986	-		Synpcc7942_1764	0.34	-1.2
1,831,986	-		Synpcc7942_1764	0.34	+0.5
1,832,005	+		Synpcc7942_1764	0.39	+0.9
1,832,010	+		Synpcc7942_1764	0.40	-0.9
1,832,010	+		Synpcc7942_1764	0.40	-1.4
1,832,010	+		Synpcc7942_1764	0.40	+0.9
1,832,011	+		Synpcc7942_1764	0.40	-1.0