Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1721

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
1,792,218	-				-1.1
1,792,218	-		Synpcc7942_1720	0.60	+1.9
1,792,218	-		Synpcc7942_1720	0.60	+0.9
1,792,220	-		Synpcc7942_1720	0.61	-0.1
1,792,307	+		Synpcc7942_1720	0.80	-1.5
1,792,309	-				-1.7
1,792,338	-		Synpcc7942_1720	0.88	+1.2
1,792,349	+				-0.1
1,792,359	+				+0.1
1,792,359	+				+1.5
1,792,359	+				-3.2
1,792,367	-				-1.7
1,792,367	-				-0.4
1,792,367	-				-0.3
1,792,367	-				-2.1
1,792,367	-				-0.4
1,792,395	-				-2.7
1,792,400	-				-0.6
1,792,430	-				+1.5
1,792,443	-				-1.7
1,792,450	-				+0.1
1,792,503	-				+0.7
1,792,551	-				-0.8
1,792,559	+				-0.1
1,792,560	-				-0.1
1,792,560	-				+0.3
1,792,561	+				-0.1
1,792,561	+				-0.1
1,792,564	+				-0.9
1,792,569	-				+0.6
1,792,569	-				-1.4
1,792,572	-				+0.9
1,792,572	-				-2.4
1,792,572	-				+0.9
1,792,626	+				+2.2
1,792,631	+				+0.9
1,792,767	-				-0.1
1,792,767	-				-1.1
1,792,768	-				-0.1
1,793,018	-				+0.9
1,793,078	-				+0.9
1,793,080	+				+0.3
1,793,091	+				+3.2
1,793,145	+				-1.1
1,793,239	-				-1.1
1,793,318	+		Synpcc7942_1721	0.15	-2.7
1,793,333	+		Synpcc7942_1721	0.17	-1.1
1,793,341	-		Synpcc7942_1721	0.18	-2.0
1,793,346	+		Synpcc7942_1721	0.19	-2.9
1,793,354	+		Synpcc7942_1721	0.20	-1.1
1,793,370	+		Synpcc7942_1721	0.22	-1.1
1,793,390	+		Synpcc7942_1721	0.25	-0.5
1,793,419	-		Synpcc7942_1721	0.29	-1.7
1,793,479	-		Synpcc7942_1721	0.38	-0.9
1,793,479	-		Synpcc7942_1721	0.38	-0.3
1,793,479	-		Synpcc7942_1721	0.38	-1.1
1,793,508	+		Synpcc7942_1721	0.42	-1.4
1,793,561	+		Synpcc7942_1721	0.50	-0.1
1,793,569	-		Synpcc7942_1721	0.51	-0.1
1,793,576	+		Synpcc7942_1721	0.52	-2.1
1,793,576	+		Synpcc7942_1721	0.52	-0.1
1,793,584	-		Synpcc7942_1721	0.53	-1.9
1,793,584	-		Synpcc7942_1721	0.53	-0.1
1,793,584	-		Synpcc7942_1721	0.53	-0.7
1,793,585	-		Synpcc7942_1721	0.53	-1.4
1,793,639	-		Synpcc7942_1721	0.61	-0.3
1,793,639	-		Synpcc7942_1721	0.61	-2.3
1,793,649	-		Synpcc7942_1721	0.62	-0.4
1,793,719	-		Synpcc7942_1721	0.72	-1.1
1,793,730	+		Synpcc7942_1721	0.73	-1.1
1,793,885	+				-0.7
1,793,909	-				-0.1
1,793,909	-				-0.1
1,793,933	-				-0.9
1,793,940	+				+0.7
1,793,995	+				-0.1
1,794,010	-				+0.5
1,794,026	+				-2.0
1,794,079	-				+3.0
1,794,098	-				-0.1
1,794,120	-				+2.3
1,794,131	+				-0.9
1,794,131	+				+0.7
1,794,131	+				-1.9
1,794,131	+				+0.9
1,794,138	-				-0.1
1,794,138	-				+0.9
1,794,138	-				-3.7
1,794,139	-				-0.1
1,794,149	+				+1.5
1,794,157	-				-1.4
1,794,204	+				+0.9
1,794,219	-				+0.9
1,794,225	+				+0.9
1,794,226	-				+0.6
1,794,227	+				+0.9
1,794,256	-	sbpA	Synpcc7942_1722	0.10	-1.1
1,794,296	+	sbpA	Synpcc7942_1722	0.14	-1.7
1,794,332	+	sbpA	Synpcc7942_1722	0.17	+1.3
1,794,332	-	sbpA	Synpcc7942_1722	0.17	-0.1
1,794,333	-	sbpA	Synpcc7942_1722	0.17	-0.7
1,794,333	-	sbpA	Synpcc7942_1722	0.17	-0.2
1,794,338	-	sbpA	Synpcc7942_1722	0.18	-0.1
1,794,340	-	sbpA	Synpcc7942_1722	0.18	-0.1
1,794,340	-	sbpA	Synpcc7942_1722	0.18	+0.4
1,794,366	+	sbpA	Synpcc7942_1722	0.21	-0.1
1,794,374	-	sbpA	Synpcc7942_1722	0.21	-0.1
1,794,374	-	sbpA	Synpcc7942_1722	0.21	-1.1
1,794,434	-	sbpA	Synpcc7942_1722	0.27	-0.1
1,794,434	-	sbpA	Synpcc7942_1722	0.27	-0.1
1,794,434	-	sbpA	Synpcc7942_1722	0.27	-1.1
1,794,434	-	sbpA	Synpcc7942_1722	0.27	-0.1
1,794,452	+	sbpA	Synpcc7942_1722	0.28	+1.2
1,794,457	+	sbpA	Synpcc7942_1722	0.29	-1.7
1,794,457	-	sbpA	Synpcc7942_1722	0.29	+0.2
1,794,473	-	sbpA	Synpcc7942_1722	0.30	+0.9
1,794,473	-	sbpA	Synpcc7942_1722	0.30	+1.5
1,794,558	+	sbpA	Synpcc7942_1722	0.38	-0.9
1,794,566	-	sbpA	Synpcc7942_1722	0.39	-0.1
1,794,569	+	sbpA	Synpcc7942_1722	0.39	-1.1
1,794,581	+	sbpA	Synpcc7942_1722	0.40	-0.1
1,794,581	+	sbpA	Synpcc7942_1722	0.40	+0.9
1,794,581	+				-1.1
1,794,621	-	sbpA	Synpcc7942_1722	0.44	+0.9
1,794,621	-	sbpA	Synpcc7942_1722	0.44	-0.1
1,794,624	+	sbpA	Synpcc7942_1722	0.44	+1.9
1,794,624	+	sbpA	Synpcc7942_1722	0.44	-0.1
1,794,624	+	sbpA	Synpcc7942_1722	0.44	-1.3
1,794,632	-	sbpA	Synpcc7942_1722	0.45	-1.1
1,794,632	-	sbpA	Synpcc7942_1722	0.45	+0.9
1,794,652	-	sbpA	Synpcc7942_1722	0.47	+0.6
1,794,712	+	sbpA	Synpcc7942_1722	0.52	+0.9
1,794,766	-	sbpA	Synpcc7942_1722	0.57	-0.8
1,794,794	-	sbpA	Synpcc7942_1722	0.60	-1.1
1,794,796	+	sbpA	Synpcc7942_1722	0.60	+0.9
1,794,796	+	sbpA	Synpcc7942_1722	0.60	+2.2
1,794,844	-	sbpA	Synpcc7942_1722	0.65	-0.4
1,794,878	+	sbpA	Synpcc7942_1722	0.68	-0.1
1,794,897	+	sbpA	Synpcc7942_1722	0.69	+0.5