Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1544

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
1,599,816	+	isiA	Synpcc7942_1542	0.45	-0.2
1,599,852	+	isiA	Synpcc7942_1542	0.48	+1.4
1,599,879	+	isiA	Synpcc7942_1542	0.51	-0.2
1,599,884	-	isiA	Synpcc7942_1542	0.52	+1.8
1,599,887	-	isiA	Synpcc7942_1542	0.52	-0.2
1,599,889	-	isiA	Synpcc7942_1542	0.52	+3.3
1,599,914	-	isiA	Synpcc7942_1542	0.55	+1.4
1,599,924	+	isiA	Synpcc7942_1542	0.55	-0.2
1,599,925	+	isiA	Synpcc7942_1542	0.56	-2.2
1,599,966	-	isiA	Synpcc7942_1542	0.60	-0.2
1,599,993	+	isiA	Synpcc7942_1542	0.62	-1.2
1,600,042	+	isiA	Synpcc7942_1542	0.67	-0.2
1,600,042	+	isiA	Synpcc7942_1542	0.67	+1.4
1,600,050	+	isiA	Synpcc7942_1542	0.68	+1.3
1,600,050	-	isiA	Synpcc7942_1542	0.68	+0.6
1,600,058	-				-0.2
1,600,060	-	isiA	Synpcc7942_1542	0.69	-0.4
1,600,078	-	isiA	Synpcc7942_1542	0.70	-1.2
1,600,088	+	isiA	Synpcc7942_1542	0.71	+0.8
1,600,093	+	isiA	Synpcc7942_1542	0.72	-1.2
1,600,093	+	isiA	Synpcc7942_1542	0.72	-0.8
1,600,093	+	isiA	Synpcc7942_1542	0.72	-0.5
1,600,123	-	isiA	Synpcc7942_1542	0.75	-0.2
1,600,128	+	isiA	Synpcc7942_1542	0.75	-1.2
1,600,136	-	isiA	Synpcc7942_1542	0.76	-2.0
1,600,148	+	isiA	Synpcc7942_1542	0.77	-0.8
1,600,153	+	isiA	Synpcc7942_1542	0.78	+1.4
1,600,156	-	isiA	Synpcc7942_1542	0.78	-0.6
1,600,159	+	isiA	Synpcc7942_1542	0.78	-1.2
1,600,159	+	isiA	Synpcc7942_1542	0.78	+0.6
1,600,193	+	isiA	Synpcc7942_1542	0.82	+1.4
1,600,194	-	isiA	Synpcc7942_1542	0.82	+0.4
1,600,194	-	isiA	Synpcc7942_1542	0.82	+0.2
1,600,195	-	isiA	Synpcc7942_1542	0.82	+2.2
1,600,203	+	isiA	Synpcc7942_1542	0.83	-0.8
1,600,203	+	isiA	Synpcc7942_1542	0.83	-0.8
1,600,203	+	isiA	Synpcc7942_1542	0.83	+2.4
1,600,203	+	isiA	Synpcc7942_1542	0.83	+0.4
1,600,203	+	isiA	Synpcc7942_1542	0.83	+0.4
1,600,203	+	isiA	Synpcc7942_1542	0.83	-1.8
1,600,203	+	isiA	Synpcc7942_1542	0.83	+2.6
1,600,203	+	isiA	Synpcc7942_1542	0.83	-1.8
1,600,208	+	isiA	Synpcc7942_1542	0.83	-1.2
1,600,211	-	isiA	Synpcc7942_1542	0.83	+2.2
1,600,211	-	isiA	Synpcc7942_1542	0.83	+0.2
1,600,211	-	isiA	Synpcc7942_1542	0.83	-0.2
1,600,211	-	isiA	Synpcc7942_1542	0.83	+2.3
1,600,211	-	isiA	Synpcc7942_1542	0.83	+0.4
1,600,211	-	isiA	Synpcc7942_1542	0.83	+0.6
1,600,211	-	isiA	Synpcc7942_1542	0.83	-2.5
1,600,211	-	isiA	Synpcc7942_1542	0.83	+0.4
1,600,213	+	isiA	Synpcc7942_1542	0.84	-1.8
1,600,213	+	isiA	Synpcc7942_1542	0.84	+1.8
1,600,221	-	isiA	Synpcc7942_1542	0.84	+1.4
1,600,221	-	isiA	Synpcc7942_1542	0.84	-0.2
1,600,244	+	isiA	Synpcc7942_1542	0.87	+1.4
1,600,273	+	isiA	Synpcc7942_1542	0.89	-0.2
1,600,278	+	isiA	Synpcc7942_1542	0.90	+0.8
1,600,281	-				-0.2
1,600,286	-				-0.9
1,600,308	+				+1.2
1,600,341	-				+1.6
1,600,356	+				+1.8
1,600,357	+				-1.2
1,600,357	+				+1.3
1,600,357	+				+0.8
1,600,365	-				-1.9
1,600,365	-				-1.8
1,600,367	+				+0.8
1,600,367	+				-2.2
1,600,367	+				+0.4
1,600,367	+				+1.8
1,600,368	+				-2.2
1,600,375	-				+2.2
1,600,376	-				-1.2
1,600,378	+				-1.0
1,600,378	+				+1.4
1,600,386	-				+0.8
1,600,386	-				-0.4
1,600,386	-				-0.0
1,600,519	-				+0.2
1,600,527	-				-1.0
1,600,571	+				-1.2
1,600,591	+				-0.2
1,600,591	+				+1.2
1,600,609	+				+0.2
1,600,613	-				+1.4
1,600,617	+				-1.2
1,600,627	+				-3.0
1,600,669	-		Synpcc7942_1543	0.13	-0.8
1,600,678	+		Synpcc7942_1543	0.21	-2.0
1,600,686	+		Synpcc7942_1543	0.27	+0.8
1,600,713	-		Synpcc7942_1543	0.48	+1.8
1,600,713	-		Synpcc7942_1543	0.48	-0.8
1,600,713	-		Synpcc7942_1543	0.48	-2.2
1,600,841	-		Synpcc7942_1544	0.15	-1.2
1,600,847	+		Synpcc7942_1544	0.18	-1.6
1,600,881	+		Synpcc7942_1544	0.31	-1.7
1,600,889	-		Synpcc7942_1544	0.35	-1.5
1,600,889	-		Synpcc7942_1544	0.35	+1.6
1,600,923	+		Synpcc7942_1544	0.48	-1.7
1,601,010	+		Synpcc7942_1544	0.83	-1.2
1,601,010	+		Synpcc7942_1544	0.83	-0.7
1,601,018	-				-0.2
1,601,099	-				+1.5
1,601,109	-		Synpcc7942_1545	0.12	+0.8
1,601,116	+		Synpcc7942_1545	0.13	-0.2
1,601,116	+		Synpcc7942_1545	0.13	-1.2
1,601,116	+		Synpcc7942_1545	0.13	+0.5
1,601,116	+		Synpcc7942_1545	0.13	+3.4
1,601,124	-		Synpcc7942_1545	0.15	+1.5
1,601,124	-		Synpcc7942_1545	0.15	-0.2
1,601,160	-		Synpcc7942_1545	0.23	-0.4
1,601,162	+		Synpcc7942_1545	0.23	-0.7
1,601,171	+		Synpcc7942_1545	0.25	+0.6
1,601,192	+		Synpcc7942_1545	0.30	+0.8
1,601,205	+		Synpcc7942_1545	0.33	-1.2
1,601,217	+		Synpcc7942_1545	0.35	-0.2
1,601,250	-		Synpcc7942_1545	0.43	+0.8
1,601,310	-		Synpcc7942_1545	0.56	+1.8
1,601,315	-		Synpcc7942_1545	0.57	-0.5
1,601,387	+		Synpcc7942_1545	0.73	+0.4
1,601,400	-		Synpcc7942_1545	0.75	+1.4
1,601,402	+		Synpcc7942_1545	0.76	-2.2
1,601,402	+		Synpcc7942_1545	0.76	+0.8
1,601,410	-		Synpcc7942_1545	0.78	-2.2
1,601,410	-		Synpcc7942_1545	0.78	-0.2
1,601,410	-		Synpcc7942_1545	0.78	+0.4
1,601,430	-		Synpcc7942_1545	0.82	+0.3
1,601,438	-		Synpcc7942_1545	0.84	-1.7
1,601,464	+		Synpcc7942_1545	0.89	-0.2
1,601,496	-				-0.2
1,601,497	-				-1.2
1,601,498	+				-1.2
1,601,506	-				+1.3
1,601,523	+				-3.2
1,601,541	-				-2.7
1,601,542	+				-2.5
1,601,550	-				-0.2
1,601,607	-				-2.7
1,601,706	+		Synpcc7942_1546	0.16	-1.2
1,601,709	-		Synpcc7942_1546	0.16	-1.2
1,601,714	-		Synpcc7942_1546	0.16	-2.2
1,601,714	-		Synpcc7942_1546	0.16	-1.2
1,601,759	-		Synpcc7942_1546	0.19	-1.7
1,601,798	-		Synpcc7942_1546	0.22	-0.2
1,601,809	+		Synpcc7942_1546	0.23	-3.2
1,601,847	+		Synpcc7942_1546	0.26	-1.7
1,601,865	-		Synpcc7942_1546	0.27	-1.2
1,601,911	-		Synpcc7942_1546	0.30	-1.2
1,601,913	+		Synpcc7942_1546	0.30	-4.2
1,601,933	-		Synpcc7942_1546	0.32	-1.7
1,601,957	+				-0.2
1,601,983	+				-1.2
1,601,991	-		Synpcc7942_1546	0.36	-0.2