Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1143

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
1,168,529	-				+1.2
1,168,641	-				-0.1
1,168,652	-				-0.5
1,168,690	+	lalA	Synpcc7942_1143	0.14	-0.1
1,168,698	-	lalA	Synpcc7942_1143	0.16	-1.7
1,168,708	-	lalA	Synpcc7942_1143	0.17	-0.1
1,168,710	+	lalA	Synpcc7942_1143	0.18	-3.5
1,168,710	+	lalA	Synpcc7942_1143	0.18	-2.1
1,168,814	-	lalA	Synpcc7942_1143	0.35	-0.7
1,168,943	-	lalA	Synpcc7942_1143	0.57	+0.9
1,168,974	+	lalA	Synpcc7942_1143	0.62	-0.7
1,168,974	+	lalA	Synpcc7942_1143	0.62	-0.1
1,168,995	+	lalA	Synpcc7942_1143	0.65	-1.7
1,168,995	+	lalA	Synpcc7942_1143	0.65	-0.1
1,169,024	-	lalA	Synpcc7942_1143	0.70	-1.1
1,169,039	+	lalA	Synpcc7942_1143	0.73	-0.1
1,169,084	-	lalA	Synpcc7942_1143	0.80	-1.7
1,169,124	-	lalA	Synpcc7942_1143	0.87	-1.5
1,169,138	+	lalA	Synpcc7942_1143	0.89	-0.1
1,169,146	-				-0.1
1,169,150	+				-1.1
1,169,158	-				-0.1
1,169,158	-				-3.3
1,169,175	+				-0.1
1,169,183	+				-0.1
1,169,185	+				-1.7
1,169,185	+				-1.5
1,169,185	+				-0.1
1,169,185	+				-2.5
1,169,193	-				-1.7
1,169,193	-				+0.4
1,169,193	-				-1.7
1,169,193	-				-0.1
1,169,193	-				+4.2
1,169,193	-				-1.7
1,169,206	+				+2.0
1,169,216	-				-1.7
1,169,224	-				-0.1
1,169,230	-				-0.1
1,169,250	+				-1.3
1,169,258	-				+2.4
1,169,265	+				-1.1
1,169,268	-				-3.5
1,169,275	-				+0.4
1,169,290	-				-1.1
1,169,342	-				-0.9
1,169,343	+				-1.1
1,169,351	-				-0.1
1,169,351	-				+0.9
1,169,371	+				+0.2
1,169,385	-				-2.1
1,169,400	-				+0.9
1,169,412	-				-0.3