Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1121

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
1,137,464	+				-0.1
1,137,464	+				+0.9
1,137,464	+				-0.1
1,137,472	-				-1.1
1,137,499	+				+0.1
1,137,519	-				-1.2
1,137,519	-				-0.5
1,137,519	-				-1.9
1,137,547	+				-0.1
1,137,571	+				-1.7
1,137,599	+				-1.3
1,137,614	-				-0.1
1,137,614	-				+2.4
1,137,625	+				-1.3
1,137,633	-				-2.4
1,137,639	+				-1.1
1,137,647	-				-1.7
1,137,647	-				+0.1
1,137,647	-				-1.1
1,137,652	-				+0.9
1,137,698	+				+0.9
1,137,709	-				-0.1
1,137,711	+				-1.7
1,137,711	+				-1.1
1,137,719	-				-0.1
1,137,730	+				+0.9
1,137,733	-				+0.5
1,137,733	-				+0.6
1,137,733	-				-3.8
1,137,733	-				+2.2
1,137,733	-				-0.1
1,137,763	+				+0.9
1,137,817	+				+0.0
1,137,818	+				-0.1
1,137,831	-				+0.9
1,137,857	+				-1.4
1,137,865	-				+0.5
1,137,866	-				-1.7
1,137,887	+		Synpcc7942_1120	0.17	-1.1
1,137,887	+		Synpcc7942_1120	0.17	+1.1
1,137,895	-		Synpcc7942_1120	0.22	+1.4
1,137,895	-		Synpcc7942_1120	0.22	-0.1
1,137,974	+		Synpcc7942_1120	0.73	-0.4
1,137,989	-		Synpcc7942_1120	0.83	-0.1
1,138,010	+				-1.7
1,138,098	+				-1.1
1,138,131	+				-1.0
1,138,140	+				+0.0
1,138,140	+				+1.1
1,138,140	+				-2.6
1,138,148	-				-1.7
1,138,148	-				-1.1
1,138,149	+				+0.9
1,138,151	-				+0.0
1,138,163	+				+2.5
1,138,163	+				-1.7
1,138,163	+				-0.7
1,138,171	+				+1.9
1,138,176	+				-0.1
1,138,195	+				-0.1
1,138,195	+				-0.7
1,138,203	-				+0.6
1,138,211	+				+1.0
1,138,211	+				+1.8
1,138,217	-				+0.9
1,138,219	+				-0.3
1,138,219	-				+1.7
1,138,224	+				+2.7
1,138,249	+				-0.1
1,138,255	+				+0.9
1,138,266	+				+1.6
1,138,269	-				-1.3
1,138,269	-				-1.7
1,138,284	+				-1.1
1,138,302	+				+0.3
1,138,302	+				-1.1
1,138,302	+				-1.1
1,138,333	+				-0.3
1,138,346	-				+0.6
1,138,360	-				-0.1
1,138,362	+				-0.1
1,138,370	-				+0.9
1,138,381	+				-1.1
1,138,384	+				-0.9
1,138,392	-				-0.1
1,138,410	+				+0.7
1,138,412	-				-0.1
1,138,415	-				-1.1
1,138,417	+				-0.5
1,138,433	+				-1.1
1,138,441	-				+2.1
1,138,441	-				-3.4
1,138,442	+				+2.5
1,138,442	+				+1.9
1,138,446	-				+2.7
1,138,450	-				+0.6
1,138,462	+				+0.9
1,138,462	+				-0.3
1,138,462	+				+2.2
1,138,470	-				-0.9
1,138,472	+				+1.9
1,138,472	+				-2.4
1,138,507	-				+0.2
1,138,509	+				+0.0
1,138,517	-				+1.5
1,138,517	-				-0.4
1,138,519	+				+2.9
1,138,524	+				-0.1
1,138,544	+				-0.7
1,138,546	-				-0.1
1,138,577	+				-1.1
1,138,612	+				-2.9
1,138,620	-				-0.5
1,138,654	-				+3.0
1,138,672	+				-2.4
1,138,680	-		Synpcc7942_1121	0.10	-1.9
1,138,732	+		Synpcc7942_1121	0.12	-0.1
1,138,732	+		Synpcc7942_1121	0.12	-0.1
1,138,739	+		Synpcc7942_1121	0.13	-2.1
1,138,762	-		Synpcc7942_1121	0.14	-1.1
1,138,767	-		Synpcc7942_1121	0.14	-0.1
1,138,783	+		Synpcc7942_1121	0.15	-0.1
1,138,786	+		Synpcc7942_1121	0.15	-1.7
1,138,854	+		Synpcc7942_1121	0.18	-0.1
1,138,900	+		Synpcc7942_1121	0.20	-1.7
1,138,907	+		Synpcc7942_1121	0.21	-1.7
1,138,908	-		Synpcc7942_1121	0.21	-0.1
1,138,931	+		Synpcc7942_1121	0.22	-2.9
1,138,939	-		Synpcc7942_1121	0.22	-1.0
1,138,939	-		Synpcc7942_1121	0.22	-2.6
1,138,949	-		Synpcc7942_1121	0.22	-1.1
1,138,964	-		Synpcc7942_1121	0.23	-2.6
1,139,037	+		Synpcc7942_1121	0.27	-1.7
1,139,040	+		Synpcc7942_1121	0.27	-1.1
1,139,048	-		Synpcc7942_1121	0.27	-0.8
1,139,079	-		Synpcc7942_1121	0.28	-1.1
1,139,085	-		Synpcc7942_1121	0.29	-1.7
1,139,105	+		Synpcc7942_1121	0.30	+0.9
1,139,105	+		Synpcc7942_1121	0.30	-1.1
1,139,144	-		Synpcc7942_1121	0.31	-1.7
1,139,206	-		Synpcc7942_1121	0.34	-1.8
1,139,211	-		Synpcc7942_1121	0.35	-2.7
1,139,211	-		Synpcc7942_1121	0.35	-2.9
1,139,262	+		Synpcc7942_1121	0.37	+0.5
1,139,413	+		Synpcc7942_1121	0.44	-2.4
1,139,434	-		Synpcc7942_1121	0.45	-1.1
1,139,442	+		Synpcc7942_1121	0.45	-2.4
1,139,444	+		Synpcc7942_1121	0.45	-2.4
1,139,520	-		Synpcc7942_1121	0.49	-3.1
1,139,520	-		Synpcc7942_1121	0.49	-0.7
1,139,520	-		Synpcc7942_1121	0.49	-2.4
1,139,520	-		Synpcc7942_1121	0.49	-2.1
1,139,586	-		Synpcc7942_1121	0.52	-1.1
1,139,598	-		Synpcc7942_1121	0.53	-1.7
1,139,602	-		Synpcc7942_1121	0.53	-0.7
1,139,654	+		Synpcc7942_1121	0.55	-3.1
1,139,664	-		Synpcc7942_1121	0.56	-2.1
1,139,669	+		Synpcc7942_1121	0.56	-1.5
1,139,669	+		Synpcc7942_1121	0.56	-1.3
1,139,675	+		Synpcc7942_1121	0.56	+0.9
1,139,675	+		Synpcc7942_1121	0.56	-2.1
1,139,677	-		Synpcc7942_1121	0.56	+0.9
1,139,677	-		Synpcc7942_1121	0.56	-0.1
1,139,677	-		Synpcc7942_1121	0.56	-1.7
1,139,683	-		Synpcc7942_1121	0.56	-3.3
1,139,683	-		Synpcc7942_1121	0.56	-0.1
1,139,683	-		Synpcc7942_1121	0.56	-0.1
1,139,683	-		Synpcc7942_1121	0.56	+1.2
1,139,683	-		Synpcc7942_1121	0.56	-1.1
1,139,683	-		Synpcc7942_1121	0.56	-0.1
1,139,688	-		Synpcc7942_1121	0.57	-1.1
1,139,691	-		Synpcc7942_1121	0.57	-0.1
1,139,698	+		Synpcc7942_1121	0.57	-2.7
1,139,708	+		Synpcc7942_1121	0.58	-2.1
1,139,708	+		Synpcc7942_1121	0.58	-2.1
1,139,723	-		Synpcc7942_1121	0.58	-0.7
1,139,730	+		Synpcc7942_1121	0.59	-2.1
1,139,730	+		Synpcc7942_1121	0.59	-2.1
1,139,736	-		Synpcc7942_1121	0.59	-0.9
1,139,740	+		Synpcc7942_1121	0.59	-1.1
1,139,740	+		Synpcc7942_1121	0.59	-2.1
1,139,777	+		Synpcc7942_1121	0.61	-0.1
1,139,804	-		Synpcc7942_1121	0.62	-2.1
1,139,806	+		Synpcc7942_1121	0.62	-0.9
1,139,814	+		Synpcc7942_1121	0.62	-2.1
1,139,814	+		Synpcc7942_1121	0.62	-1.1
1,139,819	+		Synpcc7942_1121	0.63	-1.7
1,139,822	-		Synpcc7942_1121	0.63	-1.1
1,139,824	+		Synpcc7942_1121	0.63	-1.7
1,139,827	-		Synpcc7942_1121	0.63	-1.1
1,139,839	+		Synpcc7942_1121	0.64	-1.1
1,139,839	+				+0.9
1,139,839	+				+1.5
1,139,866	+		Synpcc7942_1121	0.65	-2.4
1,139,867	-		Synpcc7942_1121	0.65	-3.1
1,139,873	+		Synpcc7942_1121	0.65	-2.9
1,139,874	+		Synpcc7942_1121	0.65	-1.1
1,139,896	+		Synpcc7942_1121	0.66	-0.1
1,139,938	-		Synpcc7942_1121	0.68	-1.7
1,139,953	-		Synpcc7942_1121	0.69	-2.4
1,139,953	-		Synpcc7942_1121	0.69	-3.5
1,139,989	+		Synpcc7942_1121	0.71	-1.7
1,140,024	+		Synpcc7942_1121	0.72	-2.4
1,140,061	+		Synpcc7942_1121	0.74	-1.7
1,140,098	-		Synpcc7942_1121	0.76	-0.1
1,140,144	+		Synpcc7942_1121	0.78	-0.7
1,140,163	+		Synpcc7942_1121	0.79	+0.2
1,140,171	-		Synpcc7942_1121	0.79	-3.4
1,140,206	-		Synpcc7942_1121	0.81	-2.3
1,140,215	+		Synpcc7942_1121	0.81	-1.7
1,140,215	+		Synpcc7942_1121	0.81	-0.1
1,140,223	-		Synpcc7942_1121	0.81	-2.7
1,140,223	-				-1.1
1,140,264	+		Synpcc7942_1121	0.83	-2.9
1,140,269	+		Synpcc7942_1121	0.84	-0.7
1,140,272	-		Synpcc7942_1121	0.84	-1.7
1,140,277	+		Synpcc7942_1121	0.84	-1.1
1,140,282	+		Synpcc7942_1121	0.84	-0.1
1,140,282	+		Synpcc7942_1121	0.84	-1.4
1,140,282	-		Synpcc7942_1121	0.84	-1.0
1,140,290	-		Synpcc7942_1121	0.85	-2.1
1,140,290	-		Synpcc7942_1121	0.85	-3.1
1,140,290	-		Synpcc7942_1121	0.85	-2.6
1,140,303	+		Synpcc7942_1121	0.85	-1.1
1,140,324	+		Synpcc7942_1121	0.86	-1.3
1,140,362	+		Synpcc7942_1121	0.88	-0.1
1,140,367	-		Synpcc7942_1121	0.88	-1.7
1,140,374	+		Synpcc7942_1121	0.88	-2.1
1,140,406	-		Synpcc7942_1121	0.90	-2.7
1,140,434	-				-0.1
1,140,485	-				-0.1
1,140,498	+				-1.1
1,140,544	-				-1.1
1,140,559	+				-2.1
1,140,562	-				-2.1
1,140,566	+				-0.4
1,140,567	-				-0.7
1,140,574	-				-1.7
1,140,575	-				-0.9
1,140,610	+				+1.1
1,140,611	+				-2.1
1,140,619	-				-1.1
1,140,619	-				-1.7
1,140,619	-				-2.7
1,140,644	+				+0.5
1,140,644	+				-0.1
1,140,646	+				-0.4
1,140,648	+				+0.2
1,140,651	+				+0.9
1,140,653	+				+0.9
1,140,658	-				+0.9
1,140,661	-				-1.7
1,140,668	-				-0.4
1,140,700	-				+0.9
1,140,700	-				+1.9
1,140,725	-				+0.3
1,140,733	-				-0.1
1,141,247	-				-1.0
1,141,275	-				+1.2
1,141,278	+				+1.7
1,141,286	-				-0.1
1,141,286	-				+0.5
1,141,286	-				-2.1
1,141,342	+				+1.2
1,141,449	+				-0.1
1,141,456	+				+5.7
1,141,456	+				+1.8
1,141,456	+				-0.1
1,141,456	+				+2.2
1,141,464	-				+0.9
1,141,464	-				+0.6
1,141,489	-				+0.5
1,141,495	+	rnb	Synpcc7942_1124	0.10	+3.9
1,141,505	-	rnb	Synpcc7942_1124	0.11	-0.9
1,141,561	+	rnb	Synpcc7942_1124	0.14	+0.4
1,141,569	+	rnb	Synpcc7942_1124	0.14	+2.2
1,141,574	+	rnb	Synpcc7942_1124	0.14	-0.7