Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1019

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
1,032,438	-				+0.3
1,032,447	-				+0.9
1,032,447	-				-0.1
1,032,464	+				-1.1
1,032,472	-				-0.1
1,032,472	-				+0.1
1,032,472	-				-0.1
1,032,472	-				-1.1
1,032,472	-				-0.7
1,032,472	-				+0.9
1,032,474	+				+1.5
1,032,474	+				+0.5
1,032,482	-				-1.1
1,032,482	-				-2.4
1,032,485	+				-0.1
1,032,485	+				+2.9
1,032,485	+				-1.7
1,032,485	+				+1.2
1,032,485	+				-0.1
1,032,485	+				-0.7
1,032,485	+				+1.4
1,032,485	+				+1.5
1,032,485	+				-0.7
1,032,493	-				+0.9
1,032,493	-				-1.4
1,032,493	-				-1.1
1,032,493	-				-0.1
1,032,493	-				-0.1
1,032,493	-				+0.9
1,032,493	-				+0.3
1,032,511	-				-0.7
1,032,539	-				-1.7
1,032,543	+				-0.8
1,032,543	+				-0.7
1,032,584	+				-0.1
1,032,601	+				+0.3
1,032,609	-				+1.2
1,032,664	-		Synpcc7942_1018	0.14	-1.1
1,032,668	+		Synpcc7942_1018	0.14	-0.1
1,032,676	+		Synpcc7942_1018	0.16	-1.1
1,032,688	-		Synpcc7942_1018	0.17	+0.3
1,032,699	+		Synpcc7942_1018	0.19	-1.1
1,032,712	+		Synpcc7942_1018	0.21	-1.2
1,032,756	+		Synpcc7942_1018	0.28	+1.2
1,032,765	-		Synpcc7942_1018	0.30	+0.9
1,032,782	-		Synpcc7942_1018	0.32	-0.1
1,032,796	+		Synpcc7942_1018	0.34	-2.9
1,032,801	+		Synpcc7942_1018	0.35	-0.7
1,032,817	+		Synpcc7942_1018	0.38	-2.7
1,032,822	+		Synpcc7942_1018	0.39	+1.8
1,032,825	-		Synpcc7942_1018	0.39	-0.1
1,032,825	-		Synpcc7942_1018	0.39	-0.5
1,032,830	-		Synpcc7942_1018	0.40	-0.1
1,032,842	-		Synpcc7942_1018	0.42	-0.2
1,032,855	+		Synpcc7942_1018	0.44	-0.1
1,032,855	+		Synpcc7942_1018	0.44	-3.1
1,032,863	-		Synpcc7942_1018	0.45	-1.1
1,032,863	-		Synpcc7942_1018	0.45	+0.3
1,032,867	+		Synpcc7942_1018	0.46	-0.1
1,032,924	+		Synpcc7942_1018	0.55	+0.2
1,032,938	-		Synpcc7942_1018	0.57	+1.0
1,032,939	-		Synpcc7942_1018	0.57	-1.1
1,032,979	+		Synpcc7942_1018	0.63	-0.1
1,032,983	-		Synpcc7942_1018	0.64	-0.5
1,032,985	+		Synpcc7942_1018	0.64	+0.3
1,032,985	+		Synpcc7942_1018	0.64	-0.1
1,032,990	+		Synpcc7942_1018	0.65	-0.1
1,032,990	+		Synpcc7942_1018	0.65	-2.0
1,032,990	+		Synpcc7942_1018	0.65	-4.0
1,032,993	-		Synpcc7942_1018	0.65	-0.1
1,033,021	+		Synpcc7942_1018	0.70	-1.1
1,033,061	+		Synpcc7942_1018	0.76	-0.5
1,033,078	+		Synpcc7942_1018	0.79	-0.1
1,033,086	-		Synpcc7942_1018	0.80	-0.1
1,033,088	+		Synpcc7942_1018	0.80	+1.2
1,033,119	-		Synpcc7942_1018	0.85	+0.9
1,033,142	-		Synpcc7942_1018	0.89	-1.7
1,033,142	-		Synpcc7942_1018	0.89	-0.2
1,033,144	+		Synpcc7942_1018	0.89	-2.6
1,033,149	+				-1.3
1,033,149	+				+0.5
1,033,152	+				+1.2
1,033,152	-				+1.9
1,033,152	-				-0.4
1,033,152	-				-0.1
1,033,152	-				-0.1
1,033,152	-				-0.1
1,033,152	-				+0.9
1,033,157	-				+0.6
1,033,186	+				-1.1
1,033,186	-				+1.4
1,033,198	-				+2.2
1,033,213	+				-0.1
1,033,213	+				-0.9
1,033,221	-				+0.2
1,033,226	-				+1.7
1,033,233	-				-2.7
1,033,258	-				+0.9
1,033,265	-				-0.1
1,033,284	-				-1.1
1,033,285	+				+0.2
1,033,308	-				-1.0
1,033,308	-				+0.6
1,033,308	-				+2.9
1,033,310	-				-1.7
1,033,367	+				-0.7
1,033,367	+				+0.5
1,033,424	+				-2.4
1,033,432	+				-1.1
1,033,439	+				-1.7
1,033,440	-				-1.1
1,033,440	-				-1.1
1,033,461	-	malQ	Synpcc7942_1019	0.11	-2.4
1,033,461	-	malQ	Synpcc7942_1019	0.11	-1.1
1,033,475	-				-1.1
1,033,504	+	malQ	Synpcc7942_1019	0.14	-1.1
1,033,504	+	malQ	Synpcc7942_1019	0.14	-2.4
1,033,504	+	malQ	Synpcc7942_1019	0.14	-0.7
1,033,509	+	malQ	Synpcc7942_1019	0.14	-1.5
1,033,509	+	malQ	Synpcc7942_1019	0.14	-1.7
1,033,514	+	malQ	Synpcc7942_1019	0.14	-1.1
1,033,514	+	malQ	Synpcc7942_1019	0.14	-2.1
1,033,522	-	malQ	Synpcc7942_1019	0.15	-0.1
1,033,522	-	malQ	Synpcc7942_1019	0.15	+0.9
1,033,522	-	malQ	Synpcc7942_1019	0.15	-3.2
1,033,522	-	malQ	Synpcc7942_1019	0.15	+0.9
1,033,522	-	malQ	Synpcc7942_1019	0.15	-0.1
1,033,531	+	malQ	Synpcc7942_1019	0.15	-1.5
1,033,539	-	malQ	Synpcc7942_1019	0.16	-0.1
1,033,549	+	malQ	Synpcc7942_1019	0.17	-0.1
1,033,605	+				-0.1
1,033,606	+	malQ	Synpcc7942_1019	0.20	-2.0
1,033,606	+	malQ	Synpcc7942_1019	0.20	-1.8
1,033,614	-	malQ	Synpcc7942_1019	0.21	-0.6
1,033,627	-	malQ	Synpcc7942_1019	0.22	-2.7
1,033,678	+	malQ	Synpcc7942_1019	0.25	-1.2
1,033,718	+	malQ	Synpcc7942_1019	0.28	-1.7
1,033,737	+	malQ	Synpcc7942_1019	0.29	-2.7
1,033,737	+	malQ	Synpcc7942_1019	0.29	-1.3
1,033,737	+	malQ	Synpcc7942_1019	0.29	-1.7
1,033,737	+	malQ	Synpcc7942_1019	0.29	-0.8
1,033,740	-	malQ	Synpcc7942_1019	0.29	-2.9
1,033,745	-	malQ	Synpcc7942_1019	0.30	-0.1
1,033,745	-	malQ	Synpcc7942_1019	0.30	-2.1
1,033,760	+	malQ	Synpcc7942_1019	0.31	+0.2
1,033,763	+	malQ	Synpcc7942_1019	0.31	+0.9
1,033,765	+	malQ	Synpcc7942_1019	0.31	-0.1
1,033,767	-	malQ	Synpcc7942_1019	0.31	-2.4
1,033,770	+	malQ	Synpcc7942_1019	0.31	-0.1
1,033,770	+	malQ	Synpcc7942_1019	0.31	-1.7
1,033,773	-	malQ	Synpcc7942_1019	0.32	-2.4
1,033,778	-	malQ	Synpcc7942_1019	0.32	-2.4
1,033,778	-	malQ	Synpcc7942_1019	0.32	-1.1
1,033,778	-	malQ	Synpcc7942_1019	0.32	-2.1
1,033,778	-	malQ	Synpcc7942_1019	0.32	-1.1
1,033,778	-	malQ	Synpcc7942_1019	0.32	-0.4
1,033,797	+	malQ	Synpcc7942_1019	0.33	+0.9
1,033,810	+	malQ	Synpcc7942_1019	0.34	-2.1
1,033,810	+	malQ	Synpcc7942_1019	0.34	-1.4
1,033,810	+	malQ	Synpcc7942_1019	0.34	-3.3
1,033,810	+	malQ	Synpcc7942_1019	0.34	-2.1
1,033,810	+	malQ	Synpcc7942_1019	0.34	-1.1
1,033,810	+	malQ	Synpcc7942_1019	0.34	-2.1
1,033,818	-	malQ	Synpcc7942_1019	0.35	-2.2
1,033,818	-	malQ	Synpcc7942_1019	0.35	-1.9
1,033,818	-	malQ	Synpcc7942_1019	0.35	+0.9
1,033,823	-	malQ	Synpcc7942_1019	0.35	-0.7
1,033,829	-	malQ	Synpcc7942_1019	0.35	-0.1
1,033,866	+	malQ	Synpcc7942_1019	0.38	-1.0
1,033,893	+	malQ	Synpcc7942_1019	0.40	-1.7
1,033,897	-	malQ	Synpcc7942_1019	0.40	-0.7
1,033,901	-	malQ	Synpcc7942_1019	0.40	-1.4
1,033,915	+	malQ	Synpcc7942_1019	0.41	-0.8
1,033,948	+	malQ	Synpcc7942_1019	0.43	-1.4
1,033,948	+	malQ	Synpcc7942_1019	0.43	-1.7
1,033,963	+	malQ	Synpcc7942_1019	0.44	-2.4
1,033,963	+	malQ	Synpcc7942_1019	0.44	+0.9
1,033,963	+	malQ	Synpcc7942_1019	0.44	-1.9
1,033,963	+	malQ	Synpcc7942_1019	0.44	+0.3
1,033,963	+	malQ	Synpcc7942_1019	0.44	-0.1
1,033,963	+	malQ	Synpcc7942_1019	0.44	-0.7
1,033,963	+	malQ	Synpcc7942_1019	0.44	-1.1
1,033,963	+				-0.1
1,033,963	+	malQ	Synpcc7942_1019	0.44	-1.1
1,033,963	+	malQ	Synpcc7942_1019	0.44	-0.9
1,033,963	+	malQ	Synpcc7942_1019	0.44	-1.1
1,033,963	+	malQ	Synpcc7942_1019	0.44	-1.7
1,033,963	+	malQ	Synpcc7942_1019	0.44	-1.1
1,033,971	-	malQ	Synpcc7942_1019	0.45	-0.7
1,033,971	-	malQ	Synpcc7942_1019	0.45	-0.8
1,033,971	-	malQ	Synpcc7942_1019	0.45	-1.1
1,033,971	-	malQ	Synpcc7942_1019	0.45	-0.9
1,033,971	-	malQ	Synpcc7942_1019	0.45	-0.1
1,033,971	-	malQ	Synpcc7942_1019	0.45	-1.3
1,033,971	-	malQ	Synpcc7942_1019	0.45	-1.4
1,033,971	-	malQ	Synpcc7942_1019	0.45	-1.1
1,033,971	-	malQ	Synpcc7942_1019	0.45	-0.1
1,033,986	+	malQ	Synpcc7942_1019	0.46	-3.0
1,033,991	+	malQ	Synpcc7942_1019	0.46	-1.3
1,033,993	+	malQ	Synpcc7942_1019	0.46	-1.1
1,034,001	-	malQ	Synpcc7942_1019	0.47	-1.7
1,034,038	-	malQ	Synpcc7942_1019	0.49	-0.1
1,034,038	-	malQ	Synpcc7942_1019	0.49	-2.1
1,034,074	+	malQ	Synpcc7942_1019	0.52	-0.5
1,034,079	+	malQ	Synpcc7942_1019	0.52	-3.4
1,034,079	+	malQ	Synpcc7942_1019	0.52	-3.1
1,034,095	+	malQ	Synpcc7942_1019	0.53	+0.9
1,034,095	+	malQ	Synpcc7942_1019	0.53	-1.7
1,034,095	+	malQ	Synpcc7942_1019	0.53	-2.9
1,034,103	-	malQ	Synpcc7942_1019	0.54	-0.1
1,034,103	-	malQ	Synpcc7942_1019	0.54	-1.1
1,034,103	-	malQ	Synpcc7942_1019	0.54	-1.4
1,034,108	-	malQ	Synpcc7942_1019	0.54	-1.7
1,034,131	+	malQ	Synpcc7942_1019	0.55	-1.2
1,034,165	+	malQ	Synpcc7942_1019	0.58	-1.5
1,034,165	+	malQ	Synpcc7942_1019	0.58	-0.8
1,034,166	-	malQ	Synpcc7942_1019	0.58	+0.9
1,034,173	-	malQ	Synpcc7942_1019	0.58	-2.3
1,034,173	-	malQ	Synpcc7942_1019	0.58	-2.1
1,034,173	-	malQ	Synpcc7942_1019	0.58	-0.1
1,034,196	-	malQ	Synpcc7942_1019	0.60	-1.4
1,034,196	-	malQ	Synpcc7942_1019	0.60	-2.1
1,034,201	+	malQ	Synpcc7942_1019	0.60	-2.7
1,034,201	-	malQ	Synpcc7942_1019	0.60	-2.1
1,034,201	-	malQ	Synpcc7942_1019	0.60	+0.5
1,034,209	-	malQ	Synpcc7942_1019	0.61	-1.9
1,034,209	-	malQ	Synpcc7942_1019	0.61	-0.1
1,034,218	-	malQ	Synpcc7942_1019	0.61	-0.1
1,034,229	-	malQ	Synpcc7942_1019	0.62	-0.1
1,034,254	+	malQ	Synpcc7942_1019	0.64	-1.2
1,034,284	-	malQ	Synpcc7942_1019	0.66	-2.7
1,034,305	+	malQ	Synpcc7942_1019	0.67	-0.8
1,034,321	+	malQ	Synpcc7942_1019	0.68	-2.1
1,034,355	+	malQ	Synpcc7942_1019	0.70	+0.9
1,034,355	+	malQ	Synpcc7942_1019	0.70	-1.1
1,034,359	+	malQ	Synpcc7942_1019	0.71	-1.7
1,034,363	-	malQ	Synpcc7942_1019	0.71	-2.4
1,034,363	-	malQ	Synpcc7942_1019	0.71	-0.2
1,034,451	+	malQ	Synpcc7942_1019	0.77	-1.1
1,034,456	-	malQ	Synpcc7942_1019	0.77	-1.1
1,034,463	+	malQ	Synpcc7942_1019	0.78	-0.7
1,034,470	-	malQ	Synpcc7942_1019	0.78	-1.4
1,034,480	-	malQ	Synpcc7942_1019	0.79	-0.8
1,034,481	-	malQ	Synpcc7942_1019	0.79	-2.1
1,034,481	-	malQ	Synpcc7942_1019	0.79	+0.9
1,034,503	+	malQ	Synpcc7942_1019	0.80	-2.1
1,034,511	-	malQ	Synpcc7942_1019	0.81	-2.4
1,034,540	+	malQ	Synpcc7942_1019	0.83	-3.2
1,034,548	+	malQ	Synpcc7942_1019	0.83	-1.1
1,034,556	-	malQ	Synpcc7942_1019	0.84	-2.4
1,034,556	-	malQ	Synpcc7942_1019	0.84	-1.7
1,034,572	-	malQ	Synpcc7942_1019	0.85	-0.7
1,034,587	-	malQ	Synpcc7942_1019	0.86	-2.1
1,034,592	-	malQ	Synpcc7942_1019	0.86	-1.1
1,034,593	+	malQ	Synpcc7942_1019	0.86	-1.1
1,034,636	+	malQ	Synpcc7942_1019	0.89	-3.3
1,034,643	+	malQ	Synpcc7942_1019	0.90	-0.8
1,034,672	-				-0.1
1,034,692	+				-0.1
1,034,700	-				-2.1
1,034,721	+				-1.1
1,034,755	-				-0.1
1,034,778	+				-1.8
1,034,779	+				-3.9
1,034,798	-				-0.5
1,034,800	-				-1.7
1,035,740	+				+1.1
1,035,749	-				-0.1