Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0147

Experiment: Spectinomycin 0.0009765625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0009765625 mg/ml
147,166	+				-1.7
147,166	+				-1.1
147,171	+				+0.5
147,186	-				-1.1
147,191	-				+0.9
147,214	+				+1.5
147,214	+				-0.6
147,215	-				-0.1
147,220	+				-1.7
147,221	+				+1.0
147,224	-				-1.7
147,224	-				+1.5
147,244	+		Synpcc7942_0146	0.12	-0.8
147,262	+		Synpcc7942_0146	0.15	-1.7
147,383	+		Synpcc7942_0146	0.32	+0.6
147,402	-		Synpcc7942_0146	0.35	-0.7
147,430	+		Synpcc7942_0146	0.39	-1.2
147,430	+		Synpcc7942_0146	0.39	+2.4
147,440	+		Synpcc7942_0146	0.40	+0.3
147,440	+		Synpcc7942_0146	0.40	+0.1
147,440	+		Synpcc7942_0146	0.40	+1.5
147,448	-		Synpcc7942_0146	0.41	-0.1
147,463	+		Synpcc7942_0146	0.44	-1.1
147,463	+		Synpcc7942_0146	0.44	+0.9
147,478	+		Synpcc7942_0146	0.46	+0.5
147,501	+		Synpcc7942_0146	0.49	-2.2
147,501	+		Synpcc7942_0146	0.49	+0.4
147,534	+		Synpcc7942_0146	0.54	-0.1
147,549	-		Synpcc7942_0146	0.56	+3.2
147,554	+		Synpcc7942_0146	0.57	-0.7
147,554	+		Synpcc7942_0146	0.57	+0.9
147,559	-		Synpcc7942_0146	0.57	+2.1
147,631	+		Synpcc7942_0146	0.68	-0.9
147,634	+				-0.1
147,636	+		Synpcc7942_0146	0.68	-0.1
147,641	+		Synpcc7942_0146	0.69	+2.2
147,643	-		Synpcc7942_0146	0.69	+1.9
147,654	+		Synpcc7942_0146	0.71	-0.1
147,655	+		Synpcc7942_0146	0.71	+1.7
147,681	+		Synpcc7942_0146	0.75	+0.2
147,688	+		Synpcc7942_0146	0.76	-0.3
147,688	+		Synpcc7942_0146	0.76	-1.7
147,706	-		Synpcc7942_0146	0.78	+0.9
147,726	+		Synpcc7942_0146	0.81	-1.1
147,726	+		Synpcc7942_0146	0.81	+0.9
147,759	+		Synpcc7942_0146	0.86	-2.3
147,759	+		Synpcc7942_0146	0.86	+0.9
147,767	-		Synpcc7942_0146	0.87	-2.1
147,770	+		Synpcc7942_0146	0.88	+0.6
147,770	+		Synpcc7942_0146	0.88	-1.1
147,770	+		Synpcc7942_0146	0.88	-0.1
147,770	+		Synpcc7942_0146	0.88	+1.1
147,778	+		Synpcc7942_0146	0.89	-0.7
147,778	-		Synpcc7942_0146	0.89	-1.7
147,778	-		Synpcc7942_0146	0.89	-0.7
147,793	+				+1.2
147,793	+				+1.3
147,795	-				-0.1
147,802	-				+2.0
147,820	+				+1.7
147,838	+				+0.9
147,838	+				-1.1
147,846	-				-0.1
147,858	-				-0.5
147,858	-				-0.1
147,877	-				+0.5
147,888	+				-0.1
147,888	+				+0.1
147,896	-				-0.5
147,896	-				-0.4
147,896	-				+1.5
147,896	-				+0.2
147,896	-				-1.4
147,897	-				-1.7
147,925	-				+0.6
147,938	+				+0.5
147,940	+				+0.2
147,955	+				+1.1
147,955	+				+0.7
147,955	+				-1.1
147,957	+				-1.1
147,965	-				+0.4
147,981	-				-0.1
148,016	-				-1.7
148,032	+				+0.5
148,040	-				-1.7
148,047	+				+2.9
148,047	+				-1.7
148,049	+				-0.1
148,055	-				-0.1
148,060	+				-0.7
148,078	-				+2.5
148,080	+				-1.1
148,080	+				+1.5
148,089	+				+0.6
148,103	+				-0.1
148,103	+				-1.4
148,111	-				+0.3
148,135	+				+2.9
148,143	-				-1.1
148,150	+				+0.9
148,158	-				+3.4
148,194	+		Synpcc7942_0147	0.11	+0.3
148,194	+		Synpcc7942_0147	0.11	-0.1
148,201	-		Synpcc7942_0147	0.13	-0.4
148,201	-		Synpcc7942_0147	0.13	-1.1
148,201	-		Synpcc7942_0147	0.13	+0.4
148,201	-		Synpcc7942_0147	0.13	-1.1
148,201	-		Synpcc7942_0147	0.13	+0.6
148,201	-		Synpcc7942_0147	0.13	-0.1
148,251	+		Synpcc7942_0147	0.28	+0.6
148,251	+		Synpcc7942_0147	0.28	-0.1
148,251	+		Synpcc7942_0147	0.28	-1.1
148,251	+		Synpcc7942_0147	0.28	+0.4
148,251	+		Synpcc7942_0147	0.28	+0.5
148,251	-		Synpcc7942_0147	0.28	-1.1
148,253	+		Synpcc7942_0147	0.28	-2.0
148,259	+		Synpcc7942_0147	0.30	-0.1
148,259	-		Synpcc7942_0147	0.30	-0.7
148,259	-		Synpcc7942_0147	0.30	-0.1
148,259	-		Synpcc7942_0147	0.30	-0.4
148,261	-		Synpcc7942_0147	0.31	+1.7
148,261	-		Synpcc7942_0147	0.31	-0.4
148,261	-		Synpcc7942_0147	0.31	-0.1
148,287	+		Synpcc7942_0147	0.38	-1.9
148,287	+		Synpcc7942_0147	0.38	-2.1
148,287	+		Synpcc7942_0147	0.38	+0.2
148,287	+		Synpcc7942_0147	0.38	+1.1
148,292	+		Synpcc7942_0147	0.40	+0.6
148,295	-		Synpcc7942_0147	0.41	-1.1
148,295	-		Synpcc7942_0147	0.41	-1.1
148,304	+		Synpcc7942_0147	0.44	+0.9
148,312	-		Synpcc7942_0147	0.46	+0.9
148,312	-		Synpcc7942_0147	0.46	+0.9
148,317	+		Synpcc7942_0147	0.47	-0.1
148,317	+		Synpcc7942_0147	0.47	-0.1
148,376	-		Synpcc7942_0147	0.65	-0.4
148,381	-		Synpcc7942_0147	0.67	-0.3
148,393	-		Synpcc7942_0147	0.70	-0.7
148,394	-		Synpcc7942_0147	0.71	-0.1
148,408	-		Synpcc7942_0147	0.75	+1.6
148,415	+		Synpcc7942_0147	0.77	-1.1
148,427	-		Synpcc7942_0147	0.80	-0.6
148,439	+		Synpcc7942_0147	0.84	+0.9
148,466	+				-1.4
148,505	-				+0.5
148,519	+				+1.5
148,522	-				+2.5
148,522	-				+0.2
148,524	+				+1.5
148,532	-				-1.1
148,569	-				+0.6
148,570	-				-0.1
148,592	+				+1.5
148,596	-				-0.2
148,607	-				+1.8
148,625	+				-0.1
148,636	+				-0.1