Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00493 and SMc00492 are separated by 105 nucleotides SMc00492 and SMc00491 are separated by 105 nucleotides SMc00491 and SMc00490 are separated by 172 nucleotides
SMc00493: SMc00493 - phosphoribosylformylglycinamidine synthase I, at 1,916,912 to 1,917,583
SMc00493
SMc00492: SMc00492 - hypothetical protein, at 1,917,689 to 1,918,096
SMc00492
SMc00491: SMc00491 - hypothetical protein, at 1,918,202 to 1,918,354
SMc00491
SMc00490: SMc00490 - transcriptional regulator, at 1,918,527 to 1,919,945
SMc00490
Position (kb) 1918
1919 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 1917.299 kb on + strand, within SMc00493 at 1917.350 kb on + strand, within SMc00493 at 1917.350 kb on + strand, within SMc00493 at 1917.350 kb on + strand, within SMc00493 at 1917.350 kb on + strand, within SMc00493 at 1917.350 kb on + strand, within SMc00493 at 1917.411 kb on - strand, within SMc00493 at 1917.570 kb on + strand at 1917.571 kb on - strand at 1917.571 kb on - strand at 1917.571 kb on - strand at 1917.571 kb on - strand at 1917.595 kb on + strand at 1917.595 kb on + strand at 1917.688 kb on + strand at 1917.688 kb on + strand at 1917.688 kb on + strand at 1917.688 kb on + strand at 1917.689 kb on - strand at 1917.689 kb on - strand at 1917.689 kb on - strand at 1917.881 kb on + strand, within SMc00492 at 1918.256 kb on + strand, within SMc00491 at 1918.257 kb on - strand, within SMc00491 at 1918.257 kb on - strand, within SMc00491 at 1918.257 kb on - strand, within SMc00491 at 1918.257 kb on - strand, within SMc00491 at 1918.258 kb on + strand, within SMc00491 at 1918.259 kb on - strand, within SMc00491 at 1918.259 kb on - strand, within SMc00491 at 1918.329 kb on + strand, within SMc00491 at 1918.329 kb on + strand, within SMc00491 at 1918.330 kb on - strand, within SMc00491 at 1918.330 kb on - strand, within SMc00491 at 1918.486 kb on + strand at 1918.487 kb on - strand at 1918.755 kb on + strand, within SMc00490 at 1918.755 kb on + strand, within SMc00490 at 1918.756 kb on - strand, within SMc00490 at 1918.756 kb on - strand, within SMc00490 at 1918.756 kb on - strand, within SMc00490 at 1918.756 kb on - strand, within SMc00490 at 1918.756 kb on - strand, within SMc00490 at 1918.837 kb on + strand, within SMc00490 at 1918.922 kb on + strand, within SMc00490 at 1918.923 kb on - strand, within SMc00490 at 1918.923 kb on - strand, within SMc00490 at 1918.956 kb on + strand, within SMc00490 at 1918.956 kb on + strand, within SMc00490 at 1918.957 kb on - strand, within SMc00490 at 1918.957 kb on - strand, within SMc00490 at 1918.957 kb on - strand, within SMc00490 at 1918.957 kb on - strand, within SMc00490 at 1918.957 kb on - strand, within SMc00490 at 1919.343 kb on + strand, within SMc00490
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 1,917,299 + SMc00493 0.58 -3.8 1,917,350 + SMc00493 0.65 -2.0 1,917,350 + SMc00493 0.65 -2.5 1,917,350 + SMc00493 0.65 -2.5 1,917,350 + SMc00493 0.65 -2.7 1,917,350 + SMc00493 0.65 -2.0 1,917,411 - SMc00493 0.74 -5.7 1,917,570 + -0.4 1,917,571 - +0.9 1,917,571 - -2.4 1,917,571 - +0.9 1,917,571 - -1.6 1,917,595 + +0.5 1,917,595 + -3.4 1,917,688 + -2.0 1,917,688 + -0.1 1,917,688 + -1.1 1,917,688 + +0.9 1,917,689 - -2.8 1,917,689 - -4.1 1,917,689 - -0.6 1,917,881 + SMc00492 0.47 +2.2 1,918,256 + SMc00491 0.35 +0.3 1,918,257 - SMc00491 0.36 +1.9 1,918,257 - SMc00491 0.36 +0.1 1,918,257 - SMc00491 0.36 -0.6 1,918,257 - SMc00491 0.36 -0.5 1,918,258 + SMc00491 0.37 -0.9 1,918,259 - SMc00491 0.37 -1.6 1,918,259 - SMc00491 0.37 -2.4 1,918,329 + SMc00491 0.83 -1.4 1,918,329 + SMc00491 0.83 +0.9 1,918,330 - SMc00491 0.84 +0.2 1,918,330 - SMc00491 0.84 -0.7 1,918,486 + -2.7 1,918,487 - -1.1 1,918,755 + SMc00490 0.16 -2.2 1,918,755 + SMc00490 0.16 -0.0 1,918,756 - SMc00490 0.16 -3.1 1,918,756 - SMc00490 0.16 +0.1 1,918,756 - SMc00490 0.16 -0.0 1,918,756 - SMc00490 0.16 -3.4 1,918,756 - SMc00490 0.16 -2.9 1,918,837 + SMc00490 0.22 -0.4 1,918,922 + SMc00490 0.28 -0.4 1,918,923 - SMc00490 0.28 +1.9 1,918,923 - SMc00490 0.28 +0.5 1,918,956 + SMc00490 0.30 -2.0 1,918,956 + SMc00490 0.30 -0.6 1,918,957 - SMc00490 0.30 +0.5 1,918,957 - SMc00490 0.30 +1.6 1,918,957 - SMc00490 0.30 -1.5 1,918,957 - SMc00490 0.30 -1.8 1,918,957 - SMc00490 0.30 -0.3 1,919,343 + SMc00490 0.58 -0.1
Or see this region's nucleotide sequence