Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21602 and SM_b21603 are separated by 3 nucleotides SM_b21603 and SM_b21604 are separated by 78 nucleotides SM_b21604 and SM_b21605 are separated by 86 nucleotides
SM_b21602: SM_b21602 - sugar uptake ABC transporter permease, at 1,143,080 to 1,143,904
_b21602
SM_b21603: SM_b21603 - sugar uptake ABC transporter permease, at 1,143,908 to 1,144,783
_b21603
SM_b21604: SM_b21604 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,144,862 to 1,146,124
_b21604
SM_b21605: SM_b21605 - sugar uptake ABC transporter ATP-binding protein, at 1,146,211 to 1,147,299
_b21605
Position (kb)
1144
1145
1146
1147 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1143.862 kb on + strand at 1143.863 kb on - strand at 1143.880 kb on + strand at 1143.880 kb on + strand at 1143.936 kb on + strand at 1143.937 kb on - strand at 1143.937 kb on - strand at 1144.029 kb on + strand, within SM_b21603 at 1144.030 kb on - strand, within SM_b21603 at 1144.050 kb on + strand, within SM_b21603 at 1144.050 kb on + strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.051 kb on - strand, within SM_b21603 at 1144.087 kb on - strand, within SM_b21603 at 1144.221 kb on + strand, within SM_b21603 at 1144.222 kb on - strand, within SM_b21603 at 1144.222 kb on - strand, within SM_b21603 at 1144.323 kb on - strand, within SM_b21603 at 1144.403 kb on + strand, within SM_b21603 at 1144.446 kb on + strand, within SM_b21603 at 1144.446 kb on + strand, within SM_b21603 at 1144.446 kb on + strand, within SM_b21603 at 1144.447 kb on - strand, within SM_b21603 at 1144.447 kb on - strand, within SM_b21603 at 1144.541 kb on + strand, within SM_b21603 at 1144.542 kb on - strand, within SM_b21603 at 1144.617 kb on + strand, within SM_b21603 at 1144.666 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.687 kb on + strand, within SM_b21603 at 1144.688 kb on - strand, within SM_b21603 at 1144.688 kb on - strand, within SM_b21603 at 1144.690 kb on - strand, within SM_b21603 at 1144.716 kb on + strand at 1144.792 kb on + strand at 1144.793 kb on - strand at 1144.857 kb on - strand at 1144.864 kb on - strand at 1144.864 kb on - strand at 1145.385 kb on + strand, within SM_b21604 at 1145.386 kb on - strand, within SM_b21604 at 1145.391 kb on - strand, within SM_b21604 at 1145.406 kb on + strand, within SM_b21604 at 1145.517 kb on + strand, within SM_b21604 at 1145.518 kb on - strand, within SM_b21604 at 1145.518 kb on - strand, within SM_b21604 at 1145.518 kb on - strand, within SM_b21604 at 1145.518 kb on - strand, within SM_b21604 at 1145.689 kb on + strand, within SM_b21604 at 1145.690 kb on - strand, within SM_b21604 at 1145.690 kb on - strand, within SM_b21604 at 1145.690 kb on - strand, within SM_b21604 at 1145.691 kb on + strand, within SM_b21604 at 1145.692 kb on - strand, within SM_b21604 at 1145.692 kb on - strand, within SM_b21604 at 1145.692 kb on - strand, within SM_b21604 at 1145.694 kb on + strand, within SM_b21604 at 1145.730 kb on + strand, within SM_b21604 at 1145.731 kb on - strand, within SM_b21604 at 1145.731 kb on - strand, within SM_b21604 at 1145.731 kb on - strand, within SM_b21604 at 1145.731 kb on - strand, within SM_b21604 at 1145.770 kb on - strand, within SM_b21604 at 1145.770 kb on - strand, within SM_b21604 at 1145.865 kb on + strand, within SM_b21604 at 1145.865 kb on + strand, within SM_b21604 at 1145.865 kb on + strand, within SM_b21604 at 1145.866 kb on - strand, within SM_b21604 at 1145.866 kb on - strand, within SM_b21604 at 1145.866 kb on - strand, within SM_b21604 at 1145.866 kb on - strand, within SM_b21604 at 1145.866 kb on - strand, within SM_b21604 at 1145.920 kb on - strand, within SM_b21604 at 1145.920 kb on - strand, within SM_b21604 at 1145.920 kb on - strand, within SM_b21604 at 1146.043 kb on + strand at 1146.044 kb on - strand at 1146.044 kb on - strand at 1146.114 kb on - strand at 1146.318 kb on + strand at 1146.734 kb on + strand, within SM_b21605 at 1146.734 kb on + strand, within SM_b21605 at 1146.734 kb on + strand, within SM_b21605 at 1146.734 kb on + strand, within SM_b21605 at 1146.734 kb on + strand, within SM_b21605 at 1146.734 kb on + strand, within SM_b21605 at 1146.734 kb on + strand, within SM_b21605 at 1146.734 kb on + strand, within SM_b21605 at 1146.735 kb on - strand, within SM_b21605 at 1146.735 kb on - strand, within SM_b21605 at 1146.735 kb on - strand, within SM_b21605 at 1146.735 kb on - strand, within SM_b21605 at 1146.735 kb on - strand, within SM_b21605 at 1146.923 kb on + strand, within SM_b21605 at 1146.924 kb on - strand, within SM_b21605 at 1147.024 kb on + strand, within SM_b21605 at 1147.024 kb on + strand, within SM_b21605 at 1147.041 kb on - strand, within SM_b21605 at 1147.049 kb on + strand, within SM_b21605 at 1147.050 kb on - strand, within SM_b21605 at 1147.050 kb on - strand, within SM_b21605 at 1147.050 kb on - strand, within SM_b21605
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 1,143,862 + -0.5 1,143,863 - +0.5 1,143,880 + -0.7 1,143,880 + +0.7 1,143,936 + -0.1 1,143,937 - -0.8 1,143,937 - +1.9 1,144,029 + SM_b21603 0.14 +0.7 1,144,030 - SM_b21603 0.14 +0.8 1,144,050 + SM_b21603 0.16 +2.6 1,144,050 + SM_b21603 0.16 +0.0 1,144,051 - SM_b21603 0.16 -1.1 1,144,051 - SM_b21603 0.16 -0.8 1,144,051 - SM_b21603 0.16 -0.1 1,144,051 - SM_b21603 0.16 +3.8 1,144,087 - SM_b21603 0.20 +1.0 1,144,221 + SM_b21603 0.36 -0.8 1,144,222 - SM_b21603 0.36 +0.5 1,144,222 - SM_b21603 0.36 +0.5 1,144,323 - SM_b21603 0.47 +1.9 1,144,403 + SM_b21603 0.57 +2.0 1,144,446 + SM_b21603 0.61 +0.3 1,144,446 + SM_b21603 0.61 +1.5 1,144,446 + SM_b21603 0.61 +1.1 1,144,447 - SM_b21603 0.62 +0.2 1,144,447 - SM_b21603 0.62 -0.1 1,144,541 + SM_b21603 0.72 -0.0 1,144,542 - SM_b21603 0.72 +0.9 1,144,617 + SM_b21603 0.81 -0.6 1,144,666 + SM_b21603 0.87 -0.6 1,144,687 + SM_b21603 0.89 -0.3 1,144,687 + SM_b21603 0.89 -3.5 1,144,687 + SM_b21603 0.89 -0.1 1,144,687 + SM_b21603 0.89 -1.3 1,144,687 + SM_b21603 0.89 +0.8 1,144,688 - SM_b21603 0.89 -0.0 1,144,688 - SM_b21603 0.89 -1.1 1,144,690 - SM_b21603 0.89 -0.9 1,144,716 + -0.3 1,144,792 + -0.4 1,144,793 - +0.7 1,144,857 - -0.8 1,144,864 - +0.9 1,144,864 - -2.9 1,145,385 + SM_b21604 0.41 +1.7 1,145,386 - SM_b21604 0.41 -1.0 1,145,391 - SM_b21604 0.42 +0.4 1,145,406 + SM_b21604 0.43 +1.5 1,145,517 + SM_b21604 0.52 +0.6 1,145,518 - SM_b21604 0.52 +0.7 1,145,518 - SM_b21604 0.52 +0.6 1,145,518 - SM_b21604 0.52 -0.4 1,145,518 - SM_b21604 0.52 +0.4 1,145,689 + SM_b21604 0.65 +2.5 1,145,690 - SM_b21604 0.66 -1.7 1,145,690 - SM_b21604 0.66 +0.1 1,145,690 - SM_b21604 0.66 -0.7 1,145,691 + SM_b21604 0.66 +1.1 1,145,692 - SM_b21604 0.66 +0.7 1,145,692 - SM_b21604 0.66 -0.5 1,145,692 - SM_b21604 0.66 +0.3 1,145,694 + SM_b21604 0.66 -1.2 1,145,730 + SM_b21604 0.69 -0.3 1,145,731 - SM_b21604 0.69 +0.7 1,145,731 - SM_b21604 0.69 -1.5 1,145,731 - SM_b21604 0.69 -2.5 1,145,731 - SM_b21604 0.69 +0.5 1,145,770 - SM_b21604 0.72 -0.5 1,145,770 - SM_b21604 0.72 -1.9 1,145,865 + SM_b21604 0.79 +1.2 1,145,865 + SM_b21604 0.79 -0.6 1,145,865 + SM_b21604 0.79 +1.6 1,145,866 - SM_b21604 0.79 -0.1 1,145,866 - SM_b21604 0.79 -0.3 1,145,866 - SM_b21604 0.79 +0.0 1,145,866 - SM_b21604 0.79 +0.2 1,145,866 - SM_b21604 0.79 +1.0 1,145,920 - SM_b21604 0.84 -1.1 1,145,920 - SM_b21604 0.84 -2.6 1,145,920 - SM_b21604 0.84 +2.1 1,146,043 + +2.0 1,146,044 - +1.8 1,146,044 - +0.2 1,146,114 - +1.3 1,146,318 + -0.5 1,146,734 + SM_b21605 0.48 +0.6 1,146,734 + SM_b21605 0.48 +0.1 1,146,734 + SM_b21605 0.48 -2.7 1,146,734 + SM_b21605 0.48 -2.0 1,146,734 + SM_b21605 0.48 -0.3 1,146,734 + SM_b21605 0.48 +0.3 1,146,734 + SM_b21605 0.48 -0.5 1,146,734 + SM_b21605 0.48 +0.4 1,146,735 - SM_b21605 0.48 -0.2 1,146,735 - SM_b21605 0.48 -2.7 1,146,735 - SM_b21605 0.48 -0.3 1,146,735 - SM_b21605 0.48 -0.8 1,146,735 - SM_b21605 0.48 -2.8 1,146,923 + SM_b21605 0.65 +0.3 1,146,924 - SM_b21605 0.65 +0.1 1,147,024 + SM_b21605 0.75 +1.2 1,147,024 + SM_b21605 0.75 -0.1 1,147,041 - SM_b21605 0.76 +0.3 1,147,049 + SM_b21605 0.77 +0.9 1,147,050 - SM_b21605 0.77 +0.0 1,147,050 - SM_b21605 0.77 -1.1 1,147,050 - SM_b21605 0.77 -0.1
Or see this region's nucleotide sequence