Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21554 and SM_b21555 are separated by 499 nucleotides SM_b21555 and SM_b21556 are separated by 80 nucleotides
SM_b21554: SM_b21554 - hypothetical protein, at 1,092,199 to 1,092,741
_b21554
SM_b21555: SM_b21555 - potassium-efflux protein, at 1,093,241 to 1,095,022
_b21555
SM_b21556: SM_b21556 - aldehyde or xanthine dehydrogenase, at 1,095,103 to 1,097,328
_b21556
Position (kb)
1093
1094
1095
1096 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1092.251 kb on + strand at 1092.251 kb on + strand at 1092.252 kb on - strand at 1092.374 kb on + strand, within SM_b21554 at 1092.375 kb on - strand, within SM_b21554 at 1092.375 kb on - strand, within SM_b21554 at 1092.424 kb on + strand, within SM_b21554 at 1092.488 kb on + strand, within SM_b21554 at 1092.601 kb on + strand, within SM_b21554 at 1092.620 kb on + strand, within SM_b21554 at 1092.620 kb on + strand, within SM_b21554 at 1092.620 kb on + strand, within SM_b21554 at 1092.621 kb on - strand, within SM_b21554 at 1092.628 kb on - strand, within SM_b21554 at 1092.817 kb on + strand at 1092.849 kb on + strand at 1092.850 kb on - strand at 1092.983 kb on - strand at 1093.064 kb on + strand at 1093.065 kb on - strand at 1093.098 kb on - strand at 1093.098 kb on - strand at 1093.098 kb on - strand at 1093.105 kb on - strand at 1093.105 kb on - strand at 1093.204 kb on + strand at 1093.205 kb on - strand at 1093.263 kb on + strand at 1093.264 kb on - strand at 1093.352 kb on + strand at 1093.353 kb on - strand at 1093.527 kb on + strand, within SM_b21555 at 1093.527 kb on + strand, within SM_b21555 at 1093.720 kb on + strand, within SM_b21555 at 1093.720 kb on + strand, within SM_b21555 at 1093.721 kb on - strand, within SM_b21555 at 1093.721 kb on - strand, within SM_b21555 at 1093.721 kb on - strand, within SM_b21555 at 1093.831 kb on + strand, within SM_b21555 at 1093.832 kb on - strand, within SM_b21555 at 1093.862 kb on + strand, within SM_b21555 at 1093.863 kb on - strand, within SM_b21555 at 1093.863 kb on - strand, within SM_b21555 at 1093.955 kb on + strand, within SM_b21555 at 1093.955 kb on + strand, within SM_b21555 at 1093.956 kb on - strand, within SM_b21555 at 1094.156 kb on + strand, within SM_b21555 at 1094.157 kb on - strand, within SM_b21555 at 1094.157 kb on - strand, within SM_b21555 at 1094.157 kb on - strand, within SM_b21555 at 1094.168 kb on + strand, within SM_b21555 at 1094.195 kb on + strand, within SM_b21555 at 1094.196 kb on - strand, within SM_b21555 at 1094.196 kb on - strand, within SM_b21555 at 1094.196 kb on - strand, within SM_b21555 at 1094.289 kb on - strand, within SM_b21555 at 1094.358 kb on + strand, within SM_b21555 at 1094.358 kb on + strand, within SM_b21555 at 1094.597 kb on + strand, within SM_b21555 at 1094.597 kb on + strand, within SM_b21555 at 1094.597 kb on + strand, within SM_b21555 at 1094.598 kb on - strand, within SM_b21555 at 1094.598 kb on - strand, within SM_b21555 at 1094.600 kb on + strand, within SM_b21555 at 1094.951 kb on + strand at 1095.104 kb on + strand at 1095.274 kb on - strand at 1095.306 kb on - strand at 1095.605 kb on + strand, within SM_b21556 at 1095.606 kb on - strand, within SM_b21556 at 1095.623 kb on + strand, within SM_b21556 at 1095.623 kb on + strand, within SM_b21556 at 1095.623 kb on + strand, within SM_b21556 at 1095.623 kb on + strand, within SM_b21556 at 1095.624 kb on - strand, within SM_b21556 at 1095.624 kb on - strand, within SM_b21556 at 1095.624 kb on - strand, within SM_b21556 at 1095.624 kb on - strand, within SM_b21556 at 1095.914 kb on + strand, within SM_b21556 at 1095.915 kb on - strand, within SM_b21556 at 1095.979 kb on + strand, within SM_b21556 at 1095.979 kb on + strand, within SM_b21556 at 1095.980 kb on - strand, within SM_b21556 at 1096.013 kb on + strand, within SM_b21556 at 1096.013 kb on + strand, within SM_b21556 at 1096.013 kb on + strand, within SM_b21556 at 1096.013 kb on + strand, within SM_b21556 at 1096.014 kb on - strand, within SM_b21556 at 1096.014 kb on - strand, within SM_b21556 at 1096.014 kb on - strand, within SM_b21556 at 1096.014 kb on - strand, within SM_b21556 at 1096.014 kb on - strand, within SM_b21556
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 1,092,251 + +0.3 1,092,251 + -0.9 1,092,252 - +0.7 1,092,374 + SM_b21554 0.32 +0.9 1,092,375 - SM_b21554 0.32 -0.2 1,092,375 - SM_b21554 0.32 -0.2 1,092,424 + SM_b21554 0.41 +0.3 1,092,488 + SM_b21554 0.53 -2.7 1,092,601 + SM_b21554 0.74 +2.1 1,092,620 + SM_b21554 0.78 +1.3 1,092,620 + SM_b21554 0.78 -2.3 1,092,620 + SM_b21554 0.78 -0.5 1,092,621 - SM_b21554 0.78 +3.0 1,092,628 - SM_b21554 0.79 -0.7 1,092,817 + -0.0 1,092,849 + +0.1 1,092,850 - +0.2 1,092,983 - +0.1 1,093,064 + -1.0 1,093,065 - +0.1 1,093,098 - -2.9 1,093,098 - -0.3 1,093,098 - -0.1 1,093,105 - -1.1 1,093,105 - -0.2 1,093,204 + +2.0 1,093,205 - +0.6 1,093,263 + -0.6 1,093,264 - -0.6 1,093,352 + -0.1 1,093,353 - +2.7 1,093,527 + SM_b21555 0.16 +2.2 1,093,527 + SM_b21555 0.16 -0.1 1,093,720 + SM_b21555 0.27 +1.3 1,093,720 + SM_b21555 0.27 +1.4 1,093,721 - SM_b21555 0.27 +2.0 1,093,721 - SM_b21555 0.27 -3.5 1,093,721 - SM_b21555 0.27 -2.5 1,093,831 + SM_b21555 0.33 +0.8 1,093,832 - SM_b21555 0.33 +4.5 1,093,862 + SM_b21555 0.35 -0.3 1,093,863 - SM_b21555 0.35 -1.0 1,093,863 - SM_b21555 0.35 -0.7 1,093,955 + SM_b21555 0.40 -0.5 1,093,955 + SM_b21555 0.40 -1.6 1,093,956 - SM_b21555 0.40 -0.3 1,094,156 + SM_b21555 0.51 +0.1 1,094,157 - SM_b21555 0.51 +0.2 1,094,157 - SM_b21555 0.51 +1.7 1,094,157 - SM_b21555 0.51 +2.0 1,094,168 + SM_b21555 0.52 +1.3 1,094,195 + SM_b21555 0.54 +2.5 1,094,196 - SM_b21555 0.54 -0.3 1,094,196 - SM_b21555 0.54 +0.3 1,094,196 - SM_b21555 0.54 +0.2 1,094,289 - SM_b21555 0.59 +0.2 1,094,358 + SM_b21555 0.63 +0.4 1,094,358 + SM_b21555 0.63 -1.2 1,094,597 + SM_b21555 0.76 -2.8 1,094,597 + SM_b21555 0.76 -2.0 1,094,597 + SM_b21555 0.76 +0.8 1,094,598 - SM_b21555 0.76 -2.7 1,094,598 - SM_b21555 0.76 -0.5 1,094,600 + SM_b21555 0.76 +0.0 1,094,951 + +0.1 1,095,104 + +0.8 1,095,274 - +0.7 1,095,306 - -1.8 1,095,605 + SM_b21556 0.23 +0.2 1,095,606 - SM_b21556 0.23 +0.2 1,095,623 + SM_b21556 0.23 +1.1 1,095,623 + SM_b21556 0.23 -1.6 1,095,623 + SM_b21556 0.23 +0.0 1,095,623 + SM_b21556 0.23 +2.2 1,095,624 - SM_b21556 0.23 -0.0 1,095,624 - SM_b21556 0.23 +1.1 1,095,624 - SM_b21556 0.23 -0.7 1,095,624 - SM_b21556 0.23 -3.6 1,095,914 + SM_b21556 0.36 -1.7 1,095,915 - SM_b21556 0.36 -1.4 1,095,979 + SM_b21556 0.39 -3.1 1,095,979 + SM_b21556 0.39 -2.0 1,095,980 - SM_b21556 0.39 +0.2 1,096,013 + SM_b21556 0.41 -1.7 1,096,013 + SM_b21556 0.41 +1.6 1,096,013 + SM_b21556 0.41 +0.7 1,096,013 + SM_b21556 0.41 +1.5 1,096,014 - SM_b21556 0.41 -2.5 1,096,014 - SM_b21556 0.41 -0.3 1,096,014 - SM_b21556 0.41 -0.1 1,096,014 - SM_b21556 0.41 -0.4 1,096,014 - SM_b21556 0.41 -1.0
Or see this region's nucleotide sequence