Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21148 and SM_b21149 are separated by 12 nucleotides SM_b21149 and SM_b21150 overlap by 4 nucleotides SM_b21150 and SM_b21151 are separated by 29 nucleotides
SM_b21148: SM_b21148 - oxidoreductase, at 892,614 to 893,774
_b21148
SM_b21149: SM_b21149 - sugar uptake ABC transporter permease, at 893,787 to 894,671
_b21149
SM_b21150: SM_b21150 - sugar uptake ABC transporter permease, at 894,668 to 895,525
_b21150
SM_b21151: SM_b21151 - substrate-binding protein of a sugar uptake ABC transporter system, at 895,555 to 896,784
_b21151
Position (kb) 893
894
895 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 892.854 kb on - strand, within SM_b21148 at 892.860 kb on - strand, within SM_b21148 at 893.004 kb on + strand, within SM_b21148 at 893.005 kb on - strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.077 kb on + strand, within SM_b21148 at 893.078 kb on - strand, within SM_b21148 at 893.085 kb on + strand, within SM_b21148 at 893.085 kb on + strand, within SM_b21148 at 893.085 kb on + strand, within SM_b21148 at 893.086 kb on - strand, within SM_b21148 at 893.121 kb on + strand, within SM_b21148 at 893.130 kb on + strand, within SM_b21148 at 893.359 kb on - strand, within SM_b21148 at 893.380 kb on - strand, within SM_b21148 at 893.380 kb on - strand, within SM_b21148 at 893.545 kb on - strand, within SM_b21148 at 893.575 kb on - strand, within SM_b21148 at 893.848 kb on - strand at 893.882 kb on + strand, within SM_b21149 at 893.949 kb on + strand, within SM_b21149 at 894.159 kb on + strand, within SM_b21149 at 894.160 kb on - strand, within SM_b21149 at 894.160 kb on - strand, within SM_b21149 at 894.160 kb on - strand, within SM_b21149 at 894.162 kb on - strand, within SM_b21149 at 894.306 kb on + strand, within SM_b21149 at 894.307 kb on - strand, within SM_b21149 at 894.307 kb on - strand, within SM_b21149 at 894.307 kb on - strand, within SM_b21149 at 894.345 kb on + strand, within SM_b21149 at 894.346 kb on - strand, within SM_b21149 at 894.381 kb on + strand, within SM_b21149 at 894.382 kb on - strand, within SM_b21149 at 894.538 kb on - strand, within SM_b21149 at 894.538 kb on - strand, within SM_b21149 at 894.599 kb on + strand at 894.627 kb on + strand at 894.627 kb on + strand at 894.704 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand at 894.722 kb on + strand at 894.783 kb on + strand, within SM_b21150 at 894.783 kb on + strand, within SM_b21150 at 894.783 kb on + strand, within SM_b21150 at 894.858 kb on - strand, within SM_b21150 at 894.858 kb on - strand, within SM_b21150 at 894.898 kb on + strand, within SM_b21150 at 894.899 kb on - strand, within SM_b21150 at 894.968 kb on + strand, within SM_b21150 at 894.968 kb on + strand, within SM_b21150 at 894.969 kb on - strand, within SM_b21150 at 895.104 kb on - strand, within SM_b21150 at 895.169 kb on + strand, within SM_b21150 at 895.169 kb on + strand, within SM_b21150 at 895.170 kb on - strand, within SM_b21150 at 895.232 kb on + strand, within SM_b21150 at 895.239 kb on + strand, within SM_b21150 at 895.240 kb on - strand, within SM_b21150 at 895.281 kb on + strand, within SM_b21150 at 895.281 kb on + strand, within SM_b21150 at 895.310 kb on + strand at 895.311 kb on - strand, within SM_b21150 at 895.358 kb on + strand, within SM_b21150 at 895.358 kb on + strand, within SM_b21150 at 895.359 kb on - strand, within SM_b21150 at 895.389 kb on - strand, within SM_b21150 at 895.485 kb on - strand at 895.524 kb on - strand at 895.534 kb on + strand at 895.560 kb on + strand at 895.561 kb on - strand at 895.561 kb on - strand at 895.561 kb on - strand at 895.576 kb on - strand at 895.660 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 892,854 - SM_b21148 0.21 -0.9 892,860 - SM_b21148 0.21 +1.1 893,004 + SM_b21148 0.34 -2.6 893,005 - SM_b21148 0.34 +0.2 893,077 + SM_b21148 0.40 +0.7 893,077 + SM_b21148 0.40 +3.2 893,077 + SM_b21148 0.40 -0.5 893,077 + SM_b21148 0.40 +0.2 893,077 + SM_b21148 0.40 -0.1 893,077 + SM_b21148 0.40 -0.4 893,078 - SM_b21148 0.40 +1.4 893,085 + SM_b21148 0.41 -2.1 893,085 + SM_b21148 0.41 +0.2 893,085 + SM_b21148 0.41 -0.6 893,086 - SM_b21148 0.41 -3.1 893,121 + SM_b21148 0.44 +0.5 893,130 + SM_b21148 0.44 -3.2 893,359 - SM_b21148 0.64 +0.0 893,380 - SM_b21148 0.66 -0.7 893,380 - SM_b21148 0.66 -0.8 893,545 - SM_b21148 0.80 -2.1 893,575 - SM_b21148 0.83 +0.1 893,848 - -2.5 893,882 + SM_b21149 0.11 +2.2 893,949 + SM_b21149 0.18 -0.2 894,159 + SM_b21149 0.42 -0.0 894,160 - SM_b21149 0.42 +2.4 894,160 - SM_b21149 0.42 -2.2 894,160 - SM_b21149 0.42 +0.4 894,162 - SM_b21149 0.42 -1.8 894,306 + SM_b21149 0.59 +0.5 894,307 - SM_b21149 0.59 -0.1 894,307 - SM_b21149 0.59 +0.2 894,307 - SM_b21149 0.59 -0.1 894,345 + SM_b21149 0.63 +0.9 894,346 - SM_b21149 0.63 +2.8 894,381 + SM_b21149 0.67 -2.7 894,382 - SM_b21149 0.67 -0.2 894,538 - SM_b21149 0.85 -0.9 894,538 - SM_b21149 0.85 -1.8 894,599 + +2.3 894,627 + +1.9 894,627 + -3.0 894,704 + +0.4 894,722 + +0.3 894,722 + +0.3 894,722 + +0.3 894,722 + +0.0 894,722 + -0.7 894,783 + SM_b21150 0.13 +0.4 894,783 + SM_b21150 0.13 -3.5 894,783 + SM_b21150 0.13 -0.2 894,858 - SM_b21150 0.22 -2.2 894,858 - SM_b21150 0.22 +0.4 894,898 + SM_b21150 0.27 +0.9 894,899 - SM_b21150 0.27 -0.3 894,968 + SM_b21150 0.35 +1.1 894,968 + SM_b21150 0.35 -0.0 894,969 - SM_b21150 0.35 +2.9 895,104 - SM_b21150 0.51 -0.8 895,169 + SM_b21150 0.58 -2.2 895,169 + SM_b21150 0.58 +0.8 895,170 - SM_b21150 0.59 -0.0 895,232 + SM_b21150 0.66 -1.5 895,239 + SM_b21150 0.67 -1.6 895,240 - SM_b21150 0.67 -2.3 895,281 + SM_b21150 0.71 -0.6 895,281 + SM_b21150 0.71 -1.0 895,310 + +1.9 895,311 - SM_b21150 0.75 -1.4 895,358 + SM_b21150 0.80 -1.6 895,358 + SM_b21150 0.80 -1.6 895,359 - SM_b21150 0.81 -0.2 895,389 - SM_b21150 0.84 +0.5 895,485 - -0.8 895,524 - +2.8 895,534 + -1.2 895,560 + -1.9 895,561 - -1.6 895,561 - +1.1 895,561 - +1.4 895,576 - +0.8 895,660 + +0.3
Or see this region's nucleotide sequence