Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20523 and SM_b20525 are separated by 517 nucleotides SM_b20525 and SM_b20527 are separated by 589 nucleotides
SM_b20523: SM_b20523 - hypothetical protein, at 549,220 to 550,428
_b20523
SM_b20525: SM_b20525 - transcriptional regulator, at 550,946 to 551,554
_b20525
SM_b20527: SM_b20527 - hypothetical protein, at 552,144 to 552,578
_b20527
Position (kb) 550
551
552 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 549.976 kb on + strand, within SM_b20523 at 549.977 kb on - strand, within SM_b20523 at 550.097 kb on + strand, within SM_b20523 at 550.097 kb on + strand, within SM_b20523 at 550.097 kb on + strand, within SM_b20523 at 550.097 kb on + strand, within SM_b20523 at 550.098 kb on - strand, within SM_b20523 at 550.098 kb on - strand, within SM_b20523 at 550.257 kb on + strand, within SM_b20523 at 550.298 kb on - strand, within SM_b20523 at 550.442 kb on + strand at 550.443 kb on - strand at 550.444 kb on + strand at 550.445 kb on - strand at 550.445 kb on - strand at 550.445 kb on - strand at 550.445 kb on - strand at 550.499 kb on + strand at 550.499 kb on + strand at 550.499 kb on + strand at 550.500 kb on - strand at 550.500 kb on - strand at 550.500 kb on - strand at 550.524 kb on + strand at 550.524 kb on + strand at 550.525 kb on - strand at 550.805 kb on - strand at 550.805 kb on - strand at 550.831 kb on + strand at 550.832 kb on - strand at 550.832 kb on - strand at 550.898 kb on + strand at 550.898 kb on + strand at 550.898 kb on + strand at 550.899 kb on - strand at 551.049 kb on + strand, within SM_b20525 at 551.073 kb on - strand, within SM_b20525 at 551.100 kb on + strand, within SM_b20525 at 551.101 kb on - strand, within SM_b20525 at 551.101 kb on - strand, within SM_b20525 at 551.206 kb on + strand, within SM_b20525 at 551.206 kb on + strand, within SM_b20525 at 551.206 kb on + strand, within SM_b20525 at 551.206 kb on + strand, within SM_b20525 at 551.394 kb on + strand, within SM_b20525 at 551.394 kb on + strand, within SM_b20525 at 551.394 kb on + strand, within SM_b20525 at 551.395 kb on - strand, within SM_b20525 at 551.395 kb on - strand, within SM_b20525 at 551.395 kb on - strand, within SM_b20525 at 551.404 kb on - strand, within SM_b20525 at 551.483 kb on + strand, within SM_b20525 at 551.494 kb on - strand at 551.544 kb on + strand at 551.544 kb on + strand at 551.545 kb on - strand at 551.601 kb on + strand at 551.682 kb on - strand at 551.711 kb on + strand at 551.711 kb on + strand at 551.899 kb on + strand at 551.900 kb on - strand at 552.092 kb on + strand at 552.093 kb on - strand at 552.209 kb on + strand, within SM_b20527 at 552.210 kb on - strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.353 kb on + strand, within SM_b20527 at 552.354 kb on - strand, within SM_b20527 at 552.354 kb on - strand, within SM_b20527 at 552.406 kb on + strand, within SM_b20527
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 549,976 + SM_b20523 0.63 -2.7 549,977 - SM_b20523 0.63 -0.5 550,097 + SM_b20523 0.73 -2.6 550,097 + SM_b20523 0.73 +0.5 550,097 + SM_b20523 0.73 +0.4 550,097 + SM_b20523 0.73 -1.8 550,098 - SM_b20523 0.73 -0.9 550,098 - SM_b20523 0.73 +0.2 550,257 + SM_b20523 0.86 -0.8 550,298 - SM_b20523 0.89 +0.2 550,442 + +0.4 550,443 - -0.6 550,444 + -1.1 550,445 - -1.0 550,445 - +0.7 550,445 - -1.8 550,445 - +0.8 550,499 + +0.4 550,499 + +1.4 550,499 + -2.6 550,500 - +0.2 550,500 - +0.4 550,500 - +0.8 550,524 + -0.9 550,524 + -0.3 550,525 - +0.9 550,805 - +0.8 550,805 - -1.1 550,831 + -1.4 550,832 - +0.3 550,832 - +0.7 550,898 + -1.3 550,898 + -1.1 550,898 + -1.7 550,899 - +0.2 551,049 + SM_b20525 0.17 +0.0 551,073 - SM_b20525 0.21 -2.6 551,100 + SM_b20525 0.25 +1.7 551,101 - SM_b20525 0.25 -0.1 551,101 - SM_b20525 0.25 +0.9 551,206 + SM_b20525 0.43 +3.3 551,206 + SM_b20525 0.43 +4.2 551,206 + SM_b20525 0.43 -0.6 551,206 + SM_b20525 0.43 +0.1 551,394 + SM_b20525 0.74 +0.7 551,394 + SM_b20525 0.74 -0.0 551,394 + SM_b20525 0.74 +1.0 551,395 - SM_b20525 0.74 -1.8 551,395 - SM_b20525 0.74 -2.1 551,395 - SM_b20525 0.74 -0.1 551,404 - SM_b20525 0.75 +1.6 551,483 + SM_b20525 0.88 -0.6 551,494 - +0.6 551,544 + -2.2 551,544 + -0.4 551,545 - -0.5 551,601 + -2.5 551,682 - -2.1 551,711 + -0.1 551,711 + +1.9 551,899 + -0.0 551,900 - -1.3 552,092 + +1.5 552,093 - +0.8 552,209 + SM_b20527 0.15 +1.5 552,210 - SM_b20527 0.15 +0.4 552,353 + SM_b20527 0.48 +0.2 552,353 + SM_b20527 0.48 -2.5 552,353 + SM_b20527 0.48 -0.9 552,353 + SM_b20527 0.48 +1.9 552,354 - SM_b20527 0.48 -0.9 552,354 - SM_b20527 0.48 +2.2 552,406 + SM_b20527 0.60 +0.3
Or see this region's nucleotide sequence