Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20249 and SM_b20250 overlap by 4 nucleotides SM_b20250 and SM_b20251 are separated by 71 nucleotides SM_b20251 and SM_b20252 overlap by 88 nucleotides
SM_b20249: SM_b20249 - myo-inositol-1-phosphate synthase, at 255,238 to 256,341
_b20249
SM_b20250: SM_b20250 - hypothetical protein, at 256,338 to 256,937
_b20250
SM_b20251: SM_b20251 - hypothetical protein, at 257,009 to 257,971
_b20251
SM_b20252: SM_b20252 - hypothetical protein, at 257,884 to 259,248
_b20252
Position (kb) 257
258 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 256.067 kb on - strand, within SM_b20249 at 256.067 kb on - strand, within SM_b20249 at 256.068 kb on + strand, within SM_b20249 at 256.234 kb on + strand at 256.238 kb on + strand at 256.417 kb on + strand, within SM_b20250 at 256.494 kb on + strand, within SM_b20250 at 256.494 kb on + strand, within SM_b20250 at 256.494 kb on + strand, within SM_b20250 at 256.664 kb on + strand, within SM_b20250 at 256.664 kb on + strand, within SM_b20250 at 257.004 kb on + strand at 257.004 kb on + strand at 257.005 kb on - strand at 257.099 kb on - strand at 257.198 kb on - strand, within SM_b20251 at 257.525 kb on + strand, within SM_b20251 at 257.526 kb on - strand, within SM_b20251 at 257.526 kb on - strand, within SM_b20251 at 257.608 kb on - strand, within SM_b20251 at 257.667 kb on + strand, within SM_b20251 at 257.678 kb on + strand, within SM_b20251 at 257.678 kb on + strand, within SM_b20251 at 257.984 kb on + strand at 257.985 kb on - strand at 258.018 kb on - strand at 258.527 kb on + strand, within SM_b20252 at 258.749 kb on + strand, within SM_b20252 at 258.806 kb on + strand, within SM_b20252 at 258.858 kb on - strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.895 kb on + strand, within SM_b20252 at 258.896 kb on - strand, within SM_b20252 at 258.896 kb on - strand, within SM_b20252 at 258.896 kb on - strand, within SM_b20252
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 256,067 - SM_b20249 0.75 -1.1 256,067 - SM_b20249 0.75 +0.7 256,068 + SM_b20249 0.75 -0.4 256,234 + -1.7 256,238 + -0.1 256,417 + SM_b20250 0.13 +0.5 256,494 + SM_b20250 0.26 -0.3 256,494 + SM_b20250 0.26 -1.4 256,494 + SM_b20250 0.26 -0.5 256,664 + SM_b20250 0.54 -0.9 256,664 + SM_b20250 0.54 -1.4 257,004 + -1.6 257,004 + -1.7 257,005 - +0.8 257,099 - +0.4 257,198 - SM_b20251 0.20 +0.4 257,525 + SM_b20251 0.54 +1.1 257,526 - SM_b20251 0.54 +1.7 257,526 - SM_b20251 0.54 +0.4 257,608 - SM_b20251 0.62 -2.4 257,667 + SM_b20251 0.68 -1.8 257,678 + SM_b20251 0.69 +0.7 257,678 + SM_b20251 0.69 +0.3 257,984 + +0.1 257,985 - -0.9 258,018 - -4.6 258,527 + SM_b20252 0.47 +0.5 258,749 + SM_b20252 0.63 -1.7 258,806 + SM_b20252 0.68 +1.2 258,858 - SM_b20252 0.71 -2.3 258,895 + SM_b20252 0.74 +0.8 258,895 + SM_b20252 0.74 -3.2 258,895 + SM_b20252 0.74 +1.1 258,895 + SM_b20252 0.74 +0.6 258,895 + SM_b20252 0.74 +1.1 258,895 + SM_b20252 0.74 -0.1 258,895 + SM_b20252 0.74 +2.8 258,895 + SM_b20252 0.74 +0.5 258,895 + SM_b20252 0.74 -1.1 258,896 - SM_b20252 0.74 -0.2 258,896 - SM_b20252 0.74 -2.2 258,896 - SM_b20252 0.74 +1.7
Or see this region's nucleotide sequence