Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03300

Experiment: PYE with Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.1 mg/ml
3,473,236	+		CCNA_03299	0.34	+2.1
3,473,236	+		CCNA_03299	0.34	+0.6
3,473,244	+		CCNA_03299	0.35	+0.2
3,473,252	-		CCNA_03299	0.35	-0.1
3,473,252	-		CCNA_03299	0.35	+0.6
3,473,310	+		CCNA_03299	0.39	+0.7
3,473,310	+		CCNA_03299	0.39	+0.8
3,473,318	-		CCNA_03299	0.40	-1.0
3,473,318	-		CCNA_03299	0.40	-1.0
3,473,404	-		CCNA_03299	0.45	-0.2
3,473,429	+		CCNA_03299	0.47	-1.4
3,473,437	+		CCNA_03299	0.48	-0.6
3,473,456	+		CCNA_03299	0.49	+0.2
3,473,466	+		CCNA_03299	0.50	+0.8
3,473,481	-		CCNA_03299	0.51	-0.4
3,473,499	+		CCNA_03299	0.52	-0.2
3,473,499	+		CCNA_03299	0.52	+0.5
3,473,499	+		CCNA_03299	0.52	-0.7
3,473,521	+		CCNA_03299	0.53	-0.5
3,473,521	+		CCNA_03299	0.53	+1.6
3,473,521	+		CCNA_03299	0.53	+1.3
3,473,521	+		CCNA_03299	0.53	+0.4
3,473,521	+		CCNA_03299	0.53	+0.0
3,473,529	-		CCNA_03299	0.54	+0.6
3,473,529	-		CCNA_03299	0.54	-0.4
3,473,529	-		CCNA_03299	0.54	-1.5
3,473,529	-		CCNA_03299	0.54	-1.8
3,473,529	-		CCNA_03299	0.54	-2.1
3,473,568	+		CCNA_03299	0.56	+0.7
3,473,575	+		CCNA_03299	0.57	+0.9
3,473,636	+		CCNA_03299	0.61	+0.8
3,473,642	-		CCNA_03299	0.61	+0.4
3,473,644	-		CCNA_03299	0.61	+0.2
3,473,644	-		CCNA_03299	0.61	-0.2
3,473,644	-		CCNA_03299	0.61	-0.3
3,473,644	-		CCNA_03299	0.61	-0.5
3,473,644	-		CCNA_03299	0.61	-1.1
3,473,644	-		CCNA_03299	0.61	+0.2
3,473,654	-		CCNA_03299	0.62	-0.5
3,473,662	+		CCNA_03299	0.62	+0.3
3,473,670	-				+0.4
3,473,674	+		CCNA_03299	0.63	-0.4
3,473,709	+		CCNA_03299	0.66	+0.1
3,473,709	+		CCNA_03299	0.66	+0.5
3,473,709	+		CCNA_03299	0.66	-0.2
3,473,717	-		CCNA_03299	0.66	-1.2
3,473,717	-		CCNA_03299	0.66	-0.3
3,473,808	-		CCNA_03299	0.72	-0.6
3,473,847	-		CCNA_03299	0.75	-0.9
3,473,849	+		CCNA_03299	0.75	-0.4
3,473,867	+		CCNA_03299	0.76	+0.8
3,473,875	-		CCNA_03299	0.77	-1.6
3,473,898	+		CCNA_03299	0.78	+0.2
3,473,898	-		CCNA_03299	0.78	-0.2
3,473,923	+		CCNA_03299	0.80	+0.3
3,473,923	+		CCNA_03299	0.80	-0.2
3,473,931	-		CCNA_03299	0.80	-0.1
3,473,931	-		CCNA_03299	0.80	-0.2
3,473,931	-		CCNA_03299	0.80	-0.6
3,473,958	+		CCNA_03299	0.82	-0.3
3,473,977	-		CCNA_03299	0.83	-0.5
3,474,004	+		CCNA_03299	0.85	+0.2
3,474,004	+		CCNA_03299	0.85	+1.1
3,474,079	+				+2.1
3,474,081	+				-1.2
3,474,096	+				+0.3
3,474,104	-				+0.7
3,474,130	+				+1.2
3,474,143	-				+0.2
3,474,165	+				+0.2
3,474,172	-				-0.9
3,474,172	-				+0.2
3,474,180	-				+0.4
3,474,180	-				+0.5
3,474,197	+				+0.2
3,474,215	-				+1.0
3,474,267	+				+1.3
3,474,267	+				-0.0
3,474,267	+				+1.0
3,474,267	+				+1.3
3,474,267	+				+0.9
3,474,272	+				-0.1
3,474,272	+				+0.3
3,474,272	+				+0.4
3,474,272	+				+2.0
3,474,275	-				+0.7
3,474,275	-				+0.6
3,474,275	-				-0.4
3,474,275	-				+1.1
3,474,366	-		CCNA_03300	0.16	-0.5
3,474,375	+		CCNA_03300	0.17	+0.3
3,474,375	+		CCNA_03300	0.17	+1.7
3,474,375	+		CCNA_03300	0.17	+1.2
3,474,409	+		CCNA_03300	0.20	+0.8
3,474,415	+		CCNA_03300	0.21	-0.2
3,474,425	-		CCNA_03300	0.22	+1.2
3,474,435	-		CCNA_03300	0.22	+0.1
3,474,456	-		CCNA_03300	0.24	-0.4
3,474,456	-		CCNA_03300	0.24	-1.1
3,474,479	+		CCNA_03300	0.26	+0.0
3,474,479	+		CCNA_03300	0.26	+0.6
3,474,479	+		CCNA_03300	0.26	+0.1
3,474,479	+		CCNA_03300	0.26	+0.7
3,474,484	+		CCNA_03300	0.27	-2.9
3,474,487	-		CCNA_03300	0.27	+1.0
3,474,487	-		CCNA_03300	0.27	-2.4
3,474,487	-		CCNA_03300	0.27	-0.6
3,474,487	-		CCNA_03300	0.27	-1.4
3,474,487	-		CCNA_03300	0.27	+0.5
3,474,487	-		CCNA_03300	0.27	-1.4
3,474,487	-		CCNA_03300	0.27	-1.4
3,474,487	-		CCNA_03300	0.27	-0.5
3,474,522	-		CCNA_03300	0.30	+1.0
3,474,526	-		CCNA_03300	0.31	+0.8
3,474,538	+		CCNA_03300	0.32	+0.5
3,474,541	-		CCNA_03300	0.32	-0.0
3,474,546	-		CCNA_03300	0.32	+0.1
3,474,548	-		CCNA_03300	0.33	+1.4
3,474,587	+		CCNA_03300	0.36	+0.7
3,474,587	+		CCNA_03300	0.36	+1.2
3,474,587	+		CCNA_03300	0.36	+0.7
3,474,593	+		CCNA_03300	0.37	+0.6
3,474,595	-		CCNA_03300	0.37	+0.7
3,474,601	-		CCNA_03300	0.37	+0.1
3,474,601	-		CCNA_03300	0.37	-1.2
3,474,633	+		CCNA_03300	0.40	+1.2
3,474,640	+		CCNA_03300	0.41	+1.4
3,474,648	-		CCNA_03300	0.42	+0.8
3,474,648	-		CCNA_03300	0.42	+1.9
3,474,648	-				+3.0
3,474,671	+		CCNA_03300	0.44	+0.3
3,474,671	+		CCNA_03300	0.44	+0.4
3,474,671	+		CCNA_03300	0.44	+0.5
3,474,679	-		CCNA_03300	0.44	-1.6
3,474,679	-		CCNA_03300	0.44	-0.4
3,474,685	-		CCNA_03300	0.45	+1.0
3,474,686	-		CCNA_03300	0.45	-1.0
3,474,694	+		CCNA_03300	0.46	+0.6
3,474,704	+		CCNA_03300	0.47	+0.3
3,474,748	-		CCNA_03300	0.51	+2.3
3,474,851	+		CCNA_03300	0.60	+1.1
3,474,859	-		CCNA_03300	0.61	-0.1
3,474,885	+		CCNA_03300	0.63	+0.7
3,474,885	+		CCNA_03300	0.63	+1.2
3,474,898	-		CCNA_03300	0.64	-1.6
3,474,910	+		CCNA_03300	0.65	+0.9
3,474,934	-		CCNA_03300	0.67	-1.2
3,474,947	-		CCNA_03300	0.69	+1.4
3,474,954	+		CCNA_03300	0.69	+0.6
3,474,996	-		CCNA_03300	0.73	+0.4
3,475,014	-		CCNA_03300	0.75	-1.2
3,475,074	+		CCNA_03300	0.80	+0.8
3,475,082	-		CCNA_03300	0.81	-0.8
3,475,093	+		CCNA_03300	0.82	+1.1
3,475,108	-		CCNA_03300	0.83	-0.5
3,475,175	-		CCNA_03300	0.89	-0.4
3,475,197	+				+0.6
3,475,197	+				-0.0
3,475,201	-				-1.1
3,475,205	-				+0.4
3,475,242	+				+1.0
3,475,275	+				+0.7
3,475,301	-				-1.0
3,475,309	+				-0.2
3,475,311	+				+1.2
3,475,316	+				+0.0
3,475,317	-				+0.2
3,475,334	+				+0.1
3,475,355	-				-0.3
3,475,394	+				+0.2
3,475,394	+				+0.1
3,475,395	-				+1.0
3,475,402	-				+0.3
3,475,422	+				+0.4
3,475,430	-				+1.4
3,475,430	-				+1.4
3,475,444	+				+1.5
3,475,473	+				+0.2
3,475,479	+				+0.6
3,475,484	+				+0.7
3,475,564	+				+0.4
3,475,564	+				+1.0
3,475,572	-				+0.9
3,475,594	-				-1.0
3,475,597	-				+0.7
3,475,634	+		CCNA_03301	0.11	+0.1
3,475,652	+		CCNA_03301	0.11	+0.5
3,475,681	-		CCNA_03301	0.12	+0.3
3,475,683	+		CCNA_03301	0.12	+0.3
3,475,686	-		CCNA_03301	0.13	+0.3
3,475,688	+		CCNA_03301	0.13	+1.4
3,475,688	+		CCNA_03301	0.13	+0.4
3,475,688	+		CCNA_03301	0.13	+1.1
3,475,688	+		CCNA_03301	0.13	+0.5
3,475,688	+		CCNA_03301	0.13	+0.2
3,475,696	-		CCNA_03301	0.13	-0.6
3,475,696	-		CCNA_03301	0.13	-0.8
3,475,696	-		CCNA_03301	0.13	+0.0
3,475,790	+		CCNA_03301	0.16	+0.8
3,475,790	+		CCNA_03301	0.16	+0.8
3,475,790	+		CCNA_03301	0.16	+0.7
3,475,790	+		CCNA_03301	0.16	+1.0
3,475,790	+		CCNA_03301	0.16	+0.6
3,475,793	-		CCNA_03301	0.16	-0.3
3,475,803	-		CCNA_03301	0.16	-0.4
3,475,805	+		CCNA_03301	0.16	+0.6
3,475,808	-		CCNA_03301	0.16	-0.3
3,475,834	+		CCNA_03301	0.17	-2.0
3,475,916	+		CCNA_03301	0.20	-0.6
3,475,949	-		CCNA_03301	0.21	-1.1
3,476,010	+		CCNA_03301	0.23	+0.6
3,476,010	+		CCNA_03301	0.23	+0.4
3,476,096	+		CCNA_03301	0.26	-0.4
3,476,138	-		CCNA_03301	0.27	-0.2
3,476,145	+		CCNA_03301	0.27	+0.0
3,476,161	+		CCNA_03301	0.28	+1.2
3,476,219	+		CCNA_03301	0.30	+1.0
3,476,227	-		CCNA_03301	0.30	+0.6
3,476,227	-		CCNA_03301	0.30	+0.6
3,476,227	-		CCNA_03301	0.30	-2.2
3,476,227	-		CCNA_03301	0.30	+0.5