Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02400

Experiment: PYE with Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.1 mg/ml
2,541,110	-				+0.2
2,541,141	-				+0.7
2,541,156	-				-0.1
2,541,158	+				-0.9
2,541,166	-				-1.6
2,541,206	+				-1.6
2,541,206	+				-0.6
2,541,206	+				+0.3
2,541,214	-				-0.1
2,541,218	+				-1.1
2,541,218	+				+0.6
2,541,224	+				-1.8
2,541,226	-				-1.5
2,541,226	-				+0.8
2,541,297	+				-0.3
2,541,297	+				-0.3
2,541,325	-				+0.1
2,541,325	-				+0.9
2,541,330	+				-0.9
2,541,394	+		CCNA_02399	0.17	-1.3
2,541,432	-		CCNA_02399	0.22	+0.3
2,541,432	-		CCNA_02399	0.22	-0.3
2,541,432	-		CCNA_02399	0.22	+0.3
2,541,467	-		CCNA_02399	0.26	-0.0
2,541,500	-		CCNA_02399	0.30	+2.0
2,541,540	+		CCNA_02399	0.35	-1.0
2,541,548	-		CCNA_02399	0.36	+0.3
2,541,548	-		CCNA_02399	0.36	+0.3
2,541,572	+		CCNA_02399	0.39	-0.4
2,541,580	-		CCNA_02399	0.40	-0.8
2,541,587	+		CCNA_02399	0.41	+0.2
2,541,595	-		CCNA_02399	0.42	+0.0
2,541,595	-		CCNA_02399	0.42	-0.7
2,541,695	-		CCNA_02399	0.55	-1.1
2,541,775	-		CCNA_02399	0.64	-0.1
2,541,775	-		CCNA_02399	0.64	+0.0
2,541,790	-		CCNA_02399	0.66	-0.4
2,541,841	-		CCNA_02399	0.73	+0.4
2,541,889	-		CCNA_02399	0.79	-1.7
2,541,889	-		CCNA_02399	0.79	-1.9
2,541,902	+		CCNA_02399	0.80	-0.4
2,541,907	+		CCNA_02399	0.81	-0.3
2,541,910	-		CCNA_02399	0.81	+0.8
2,541,917	-		CCNA_02399	0.82	-1.3
2,541,924	-		CCNA_02399	0.83	+2.1
2,541,936	+		CCNA_02399	0.84	-0.3
2,541,936	+		CCNA_02399	0.84	+0.9
2,541,946	+		CCNA_02399	0.86	+0.4
2,541,963	+		CCNA_02399	0.88	-3.0
2,541,966	-		CCNA_02399	0.88	-1.3
2,541,971	-		CCNA_02399	0.89	-0.2
2,542,003	+				+0.8
2,542,042	-				-1.1
2,542,068	+				-2.5
2,542,070	+				+1.6
2,542,070	-				-0.9
2,542,076	-				-0.4
2,542,076	-				-0.4
2,542,076	-				+0.6
2,542,089	-				-0.1
2,542,089	-				-0.1
2,542,096	+				+0.1
2,542,191	-				-0.1
2,542,191	-				+0.2
2,542,230	+		CCNA_02400	0.11	-1.3
2,542,249	-		CCNA_02400	0.13	+0.5
2,542,285	+		CCNA_02400	0.16	-1.4
2,542,308	-		CCNA_02400	0.18	-1.6
2,542,337	+		CCNA_02400	0.20	+0.1
2,542,345	-		CCNA_02400	0.20	-0.8
2,542,364	-		CCNA_02400	0.22	-1.6
2,542,376	-		CCNA_02400	0.23	+1.1
2,542,403	-		CCNA_02400	0.25	-0.3
2,542,472	+		CCNA_02400	0.31	-2.0
2,542,478	-		CCNA_02400	0.31	+2.0
2,542,480	-		CCNA_02400	0.31	-1.1
2,542,490	-		CCNA_02400	0.32	-0.0
2,542,500	+		CCNA_02400	0.33	-0.1
2,542,501	-		CCNA_02400	0.33	-0.9
2,542,528	+		CCNA_02400	0.35	-0.9
2,542,537	-		CCNA_02400	0.36	-1.7
2,542,541	-		CCNA_02400	0.36	-0.9
2,542,568	+		CCNA_02400	0.38	-1.9
2,542,572	+		CCNA_02400	0.39	-0.2
2,542,572	+		CCNA_02400	0.39	-0.3
2,542,587	+		CCNA_02400	0.40	-0.8
2,542,589	+		CCNA_02400	0.40	-2.5
2,542,594	+		CCNA_02400	0.40	-1.0
2,542,594	+		CCNA_02400	0.40	-0.6
2,542,601	+		CCNA_02400	0.41	+0.2
2,542,604	-		CCNA_02400	0.41	+1.3
2,542,604	-		CCNA_02400	0.41	-0.0
2,542,604	-		CCNA_02400	0.41	-0.9
2,542,620	-		CCNA_02400	0.42	-0.2
2,542,657	-		CCNA_02400	0.45	-1.8
2,542,663	-				+3.1
2,542,728	-		CCNA_02400	0.51	-0.2
2,542,731	+		CCNA_02400	0.51	+1.0
2,542,779	-		CCNA_02400	0.55	-0.6
2,542,784	+		CCNA_02400	0.55	-0.4
2,542,791	+		CCNA_02400	0.56	-1.9
2,542,799	+		CCNA_02400	0.57	-0.3
2,542,841	+		CCNA_02400	0.60	+0.3
2,542,899	+		CCNA_02400	0.65	-1.4
2,542,899	+		CCNA_02400	0.65	-1.8
2,542,905	-		CCNA_02400	0.65	-0.9
2,542,905	-		CCNA_02400	0.65	+0.2
2,542,907	-		CCNA_02400	0.65	-1.8
2,542,907	-		CCNA_02400	0.65	-1.2
2,542,907	-		CCNA_02400	0.65	+0.4
2,542,916	+		CCNA_02400	0.66	-0.4
2,542,938	+		CCNA_02400	0.68	-1.0
2,542,974	+		CCNA_02400	0.70	-2.6
2,542,982	-		CCNA_02400	0.71	-1.3
2,543,005	-		CCNA_02400	0.73	-0.6
2,543,005	-		CCNA_02400	0.73	-0.8
2,543,005	-		CCNA_02400	0.73	+0.8
2,543,011	+		CCNA_02400	0.73	-1.3
2,543,013	+		CCNA_02400	0.74	+0.1
2,543,076	+		CCNA_02400	0.79	+1.6
2,543,078	-		CCNA_02400	0.79	+0.4
2,543,097	+		CCNA_02400	0.80	+0.1
2,543,118	+		CCNA_02400	0.82	-0.3
2,543,131	+		CCNA_02400	0.83	-1.4
2,543,222	-				+0.0
2,543,222	-				+0.2
2,543,252	-				-0.4
2,543,270	-				-0.0
2,543,272	+				-0.9
2,543,279	+				-0.4
2,543,285	-				-1.5
2,543,287	-				-1.1
2,543,287	-				+0.5
2,543,287	-				-0.4
2,543,287	-				+0.7
2,543,344	+				-1.7
2,543,350	-				+2.2
2,543,379	-				-0.1
2,543,459	+				+0.7
2,543,459	+				+1.1
2,543,459	+				+0.9
2,543,459	+				+0.5
2,543,467	-				+1.6
2,543,486	-				-0.9
2,543,494	-				-1.6
2,543,513	-				-2.1
2,543,523	-				-1.0
2,543,526	+				+0.3
2,543,526	+				+0.3
2,543,546	+				-0.7
2,543,558	+				-1.1
2,543,563	+				+1.6
2,543,566	-				-1.0
2,543,645	-		CCNA_02401	0.13	-1.2
2,543,679	+		CCNA_02401	0.16	-0.0
2,543,682	-		CCNA_02401	0.16	+0.6
2,543,721	+		CCNA_02401	0.20	+0.7
2,543,729	-		CCNA_02401	0.21	-1.9
2,543,773	+		CCNA_02401	0.25	-0.9
2,543,790	+		CCNA_02401	0.26	+1.1
2,543,790	+		CCNA_02401	0.26	+0.5
2,543,798	-		CCNA_02401	0.27	-0.4
2,543,800	+		CCNA_02401	0.27	+0.8
2,543,811	+		CCNA_02401	0.28	+0.4
2,543,811	+		CCNA_02401	0.28	+0.8
2,543,812	+		CCNA_02401	0.29	+0.7
2,543,850	+		CCNA_02401	0.32	+0.1
2,543,850	+		CCNA_02401	0.32	+1.0
2,543,900	+		CCNA_02401	0.37	+0.8
2,543,902	+		CCNA_02401	0.37	+0.9
2,543,902	+		CCNA_02401	0.37	+1.0
2,543,902	+		CCNA_02401	0.37	+1.6
2,543,904	+		CCNA_02401	0.37	+0.6
2,543,910	-		CCNA_02401	0.38	+0.3
2,543,910	-		CCNA_02401	0.38	+1.4
2,543,910	-		CCNA_02401	0.38	+1.0
2,543,914	-		CCNA_02401	0.38	-2.1
2,543,926	-		CCNA_02401	0.39	-0.8
2,543,931	-		CCNA_02401	0.40	-0.3
2,543,970	+		CCNA_02401	0.44	+2.1
2,543,970	+		CCNA_02401	0.44	+1.4
2,543,978	-		CCNA_02401	0.44	+0.0
2,543,986	+		CCNA_02401	0.45	+0.8
2,543,996	+		CCNA_02401	0.46	+1.1
2,544,004	+		CCNA_02401	0.47	+0.8
2,544,010	-		CCNA_02401	0.47	-0.6
2,544,010	-		CCNA_02401	0.47	-1.0
2,544,012	-		CCNA_02401	0.48	+0.4
2,544,032	+		CCNA_02401	0.49	+0.9
2,544,145	+		CCNA_02401	0.60	+0.8
2,544,145	+		CCNA_02401	0.60	+0.6
2,544,167	+		CCNA_02401	0.62	-0.1
2,544,175	-		CCNA_02401	0.63	-1.3
2,544,180	+		CCNA_02401	0.64	+1.3
2,544,233	+		CCNA_02401	0.69	-0.1
2,544,233	+		CCNA_02401	0.69	+1.3
2,544,233	+		CCNA_02401	0.69	+1.3
2,544,241	-		CCNA_02401	0.69	-0.9
2,544,241	-		CCNA_02401	0.69	-2.0
2,544,330	+		CCNA_02401	0.78	+1.0
2,544,338	-		CCNA_02401	0.79	+0.3
2,544,338	-		CCNA_02401	0.79	-0.5
2,544,338	-		CCNA_02401	0.79	+0.3