Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01414

Experiment: PYE with Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.1 mg/ml
1,530,748	+		CCNA_01412	0.67	+1.5
1,530,755	+		CCNA_01412	0.68	+1.1
1,530,760	+		CCNA_01412	0.68	+1.1
1,530,763	-		CCNA_01412	0.69	-1.2
1,530,767	+		CCNA_01412	0.69	+1.6
1,530,768	-		CCNA_01412	0.69	+0.7
1,530,805	+		CCNA_01412	0.72	+0.8
1,530,805	+		CCNA_01412	0.72	+0.5
1,530,813	-		CCNA_01412	0.73	-0.4
1,530,813	-		CCNA_01412	0.73	-1.2
1,530,828	-		CCNA_01412	0.74	-1.4
1,530,855	-		CCNA_01412	0.77	-0.5
1,530,912	+		CCNA_01412	0.82	+0.9
1,530,919	+		CCNA_01412	0.82	+1.1
1,530,922	-		CCNA_01412	0.83	+0.8
1,530,927	-		CCNA_01412	0.83	-1.4
1,530,957	+		CCNA_01412	0.86	+1.2
1,531,007	+				+1.9
1,531,007	+				+1.7
1,531,012	+				+0.9
1,531,015	-				+0.4
1,531,017	+				+1.2
1,531,068	+				+1.1
1,531,078	+				+1.6
1,531,100	+				+1.3
1,531,100	+				+1.5
1,531,211	+		CCNA_01413	0.14	+1.0
1,531,217	-		CCNA_01413	0.15	-1.1
1,531,226	+		CCNA_01413	0.16	+1.2
1,531,232	+		CCNA_01413	0.17	+1.3
1,531,234	-		CCNA_01413	0.18	+1.1
1,531,244	+		CCNA_01413	0.19	+1.5
1,531,250	+		CCNA_01413	0.20	+1.7
1,531,324	+		CCNA_01413	0.33	+0.5
1,531,344	+		CCNA_01413	0.36	+1.4
1,531,344	+		CCNA_01413	0.36	+1.2
1,531,344	+		CCNA_01413	0.36	+1.7
1,531,363	+		CCNA_01413	0.39	+0.3
1,531,380	+		CCNA_01413	0.42	+1.3
1,531,383	-		CCNA_01413	0.42	-0.9
1,531,388	-		CCNA_01413	0.43	-1.9
1,531,403	+		CCNA_01413	0.46	+1.0
1,531,499	+		CCNA_01413	0.62	+0.4
1,531,546	-		CCNA_01413	0.70	-1.1
1,531,573	+		CCNA_01413	0.74	+0.7
1,531,581	-		CCNA_01413	0.76	-1.0
1,531,596	-		CCNA_01413	0.78	+0.1
1,531,609	+		CCNA_01413	0.80	+1.2
1,531,625	+		CCNA_01413	0.83	+0.8
1,531,722	+				+0.7
1,531,746	+				+0.5
1,531,754	+				+0.7
1,531,754	+				+0.8
1,531,754	+				+0.8
1,531,754	+				+0.7
1,531,754	+				+0.7
1,531,754	+				+0.6
1,531,754	+				-0.9
1,531,754	+				+0.6
1,531,754	+				+0.6
1,531,762	-				-0.9
1,531,762	-				-2.3
1,531,790	+				+0.1
1,531,795	+				+1.5
1,531,801	+				+0.5
1,531,846	+		CCNA_01414	0.10	+2.1
1,531,849	-		CCNA_01414	0.11	+0.3
1,531,856	+		CCNA_01414	0.11	+0.4
1,531,856	+		CCNA_01414	0.11	+0.1
1,531,856	+		CCNA_01414	0.11	+0.8
1,531,864	-		CCNA_01414	0.12	+1.1
1,531,866	-		CCNA_01414	0.12	-0.8
1,531,887	+		CCNA_01414	0.14	+0.2
1,531,892	+		CCNA_01414	0.15	+0.5
1,531,892	+		CCNA_01414	0.15	-0.7
1,531,911	-		CCNA_01414	0.17	-2.2
1,531,949	+				+2.1
1,531,974	+		CCNA_01414	0.23	+1.2
1,532,038	-		CCNA_01414	0.29	+0.3
1,532,064	+		CCNA_01414	0.31	+1.9
1,532,066	+		CCNA_01414	0.31	+0.4
1,532,102	+		CCNA_01414	0.35	-0.3
1,532,153	+		CCNA_01414	0.40	+0.7
1,532,154	+		CCNA_01414	0.40	+1.1
1,532,164	+		CCNA_01414	0.41	+0.3
1,532,173	+		CCNA_01414	0.42	+0.4
1,532,183	+		CCNA_01414	0.42	+0.3
1,532,211	+		CCNA_01414	0.45	+0.4
1,532,245	+		CCNA_01414	0.48	+0.9
1,532,245	+		CCNA_01414	0.48	-0.6
1,532,245	+		CCNA_01414	0.48	+1.2
1,532,245	+		CCNA_01414	0.48	+0.0
1,532,245	+		CCNA_01414	0.48	+1.4
1,532,245	+		CCNA_01414	0.48	+0.4
1,532,253	-		CCNA_01414	0.49	-0.5
1,532,253	-		CCNA_01414	0.49	+0.2
1,532,253	-		CCNA_01414	0.49	-1.0
1,532,267	+		CCNA_01414	0.50	-0.7
1,532,267	+		CCNA_01414	0.50	+0.3
1,532,313	+		CCNA_01414	0.55	+0.5
1,532,379	+		CCNA_01414	0.61	+1.3
1,532,384	+		CCNA_01414	0.62	+1.8
1,532,396	+		CCNA_01414	0.63	+1.4
1,532,414	+		CCNA_01414	0.64	+0.3
1,532,496	-		CCNA_01414	0.72	-1.1
1,532,507	+		CCNA_01414	0.73	+1.2
1,532,508	-		CCNA_01414	0.73	-1.4
1,532,533	-		CCNA_01414	0.76	-0.7
1,532,540	-		CCNA_01414	0.76	-0.8
1,532,540	-		CCNA_01414	0.76	-1.2
1,532,554	+		CCNA_01414	0.78	+0.3
1,532,677	+		CCNA_01414	0.89	+1.5
1,532,685	-				-1.7
1,532,687	+				+0.8
1,532,689	+				+0.8
1,532,707	+				+0.5
1,532,707	+				-0.4
1,532,707	+				+0.2
1,532,715	-				-0.2
1,532,751	+				+1.1
1,532,799	+				+1.9
1,532,816	+				+2.1
1,532,857	-				-0.1
1,532,859	+				+0.2
1,532,877	+				+1.6
1,532,877	+				+1.5
1,533,035	+		CCNA_01415	0.24	+1.6
1,533,035	+		CCNA_01415	0.24	+1.3
1,533,045	+		CCNA_01415	0.25	+0.8
1,533,053	-		CCNA_01415	0.26	-0.4
1,533,053	-		CCNA_01415	0.26	-0.1
1,533,053	-		CCNA_01415	0.26	+1.3
1,533,060	+		CCNA_01415	0.27	+1.6
1,533,073	+		CCNA_01415	0.28	+1.5
1,533,100	-		CCNA_01415	0.32	-0.8
1,533,146	+		CCNA_01415	0.37	+2.0
1,533,147	+		CCNA_01415	0.38	+1.5
1,533,152	+		CCNA_01415	0.38	+1.5
1,533,152	+		CCNA_01415	0.38	+1.7
1,533,152	+		CCNA_01415	0.38	+1.8
1,533,152	+		CCNA_01415	0.38	+1.2
1,533,153	+		CCNA_01415	0.38	+1.6
1,533,153	+		CCNA_01415	0.38	+2.8
1,533,153	+		CCNA_01415	0.38	+1.6
1,533,153	+		CCNA_01415	0.38	+1.6
1,533,153	+		CCNA_01415	0.38	+1.5
1,533,153	+		CCNA_01415	0.38	+2.0
1,533,153	+		CCNA_01415	0.38	+1.7
1,533,153	+		CCNA_01415	0.38	+1.7
1,533,153	+		CCNA_01415	0.38	+1.6
1,533,153	+		CCNA_01415	0.38	+1.7
1,533,153	+		CCNA_01415	0.38	+1.2
1,533,153	+		CCNA_01415	0.38	+2.0
1,533,160	-		CCNA_01415	0.39	-1.3
1,533,160	-		CCNA_01415	0.39	-0.2
1,533,161	-		CCNA_01415	0.39	-0.4
1,533,161	-		CCNA_01415	0.39	-0.1
1,533,161	-		CCNA_01415	0.39	+0.2
1,533,187	-		CCNA_01415	0.43	+0.3
1,533,187	-		CCNA_01415	0.43	+1.0
1,533,199	+		CCNA_01415	0.44	+1.2
1,533,290	+		CCNA_01415	0.56	+1.2
1,533,309	+		CCNA_01415	0.58	+1.8
1,533,364	-		CCNA_01415	0.65	-0.7
1,533,439	+		CCNA_01415	0.74	+1.5
1,533,447	+		CCNA_01415	0.75	+2.1
1,533,457	+		CCNA_01415	0.76	+1.7
1,533,457	-		CCNA_01415	0.76	-2.2
1,533,467	+		CCNA_01415	0.78	+2.0
1,533,478	+		CCNA_01415	0.79	-0.2
1,533,486	-		CCNA_01415	0.80	+2.5
1,533,486	-		CCNA_01415	0.80	+2.2
1,533,488	+		CCNA_01415	0.80	+2.1
1,533,488	+		CCNA_01415	0.80	+1.8
1,533,488	+		CCNA_01415	0.80	+2.3
1,533,493	+		CCNA_01415	0.81	+2.1
1,533,496	-		CCNA_01415	0.81	-0.4
1,533,496	-		CCNA_01415	0.81	-1.2
1,533,501	-		CCNA_01415	0.82	-0.1
1,533,502	-		CCNA_01415	0.82	+0.5
1,533,528	+		CCNA_01415	0.85	+1.5
1,533,528	+		CCNA_01415	0.85	+2.4
1,533,575	+				+2.2
1,533,575	+				+2.3
1,533,731	-				-0.7