Strain Fitness in Caulobacter crescentus NA1000 around CCNA_00136

Experiment: PYE with Carbenicillin 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Carbenicillin 0.1 mg/ml
144,306	+		CCNA_00134	0.74	-1.1
144,306	+		CCNA_00134	0.74	-1.2
144,306	+		CCNA_00134	0.74	-2.7
144,306	+		CCNA_00134	0.74	-0.8
144,306	+		CCNA_00134	0.74	-2.1
144,306	+		CCNA_00134	0.74	-0.9
144,314	-		CCNA_00134	0.76	-0.2
144,314	-		CCNA_00134	0.76	-1.1
144,368	+		CCNA_00134	0.88	-1.4
144,390	+				-1.4
144,393	-				+0.7
144,406	+				-1.1
144,428	+				-0.8
144,436	-				-0.9
144,445	+				+0.4
144,468	+				-1.2
144,470	-				-1.9
144,472	+				+0.4
144,472	+				-1.5
144,472	+				+0.2
144,472	+				-0.4
144,480	-				-1.0
144,480	-				+1.1
144,480	-				-1.9
144,487	+				-1.7
144,507	-				-1.3
144,771	-		CCNA_00135	0.39	-1.1
144,771	-		CCNA_00135	0.39	-0.2
144,771	-		CCNA_00135	0.39	-1.9
144,794	+		CCNA_00135	0.42	-1.0
144,811	-		CCNA_00135	0.44	+0.4
144,850	+		CCNA_00135	0.49	-0.1
144,872	+		CCNA_00135	0.51	-1.3
144,880	-		CCNA_00135	0.52	-3.6
144,961	+		CCNA_00135	0.62	-2.7
144,971	+		CCNA_00135	0.63	-2.0
144,971	+		CCNA_00135	0.63	-0.6
144,971	+		CCNA_00135	0.63	-1.3
144,979	-		CCNA_00135	0.64	-2.6
144,979	-		CCNA_00135	0.64	+0.2
144,986	+		CCNA_00135	0.65	-0.2
145,004	+		CCNA_00135	0.67	-2.1
145,079	-		CCNA_00135	0.76	-0.8
145,108	+		CCNA_00135	0.80	-0.4
145,116	-		CCNA_00135	0.81	-0.8
145,127	+		CCNA_00135	0.82	-1.1
145,129	+		CCNA_00135	0.82	-1.0
145,129	+		CCNA_00135	0.82	-1.3
145,137	-		CCNA_00135	0.83	-2.8
145,289	+				+0.6
145,297	-				+0.4
145,342	+				-0.7
145,342	+				-0.7
145,342	+				-2.6
145,345	-				-0.1
145,350	-				-2.1
145,378	-				-0.2
145,386	+				-0.6
145,407	+				-1.4
145,457	+		CCNA_00136	0.11	-3.1
145,457	+		CCNA_00136	0.11	-0.6
145,457	+		CCNA_00136	0.11	-0.9
145,457	+		CCNA_00136	0.11	-1.3
145,465	-		CCNA_00136	0.11	-2.8
145,465	-		CCNA_00136	0.11	-0.5
145,465	-		CCNA_00136	0.11	-1.2
145,516	-		CCNA_00136	0.14	+1.1
145,525	+		CCNA_00136	0.15	+1.4
145,532	+		CCNA_00136	0.15	-0.2
145,552	+		CCNA_00136	0.17	-2.0
145,561	-		CCNA_00136	0.17	-1.4
145,564	+		CCNA_00136	0.17	+2.8
145,570	-		CCNA_00136	0.18	-1.2
145,570	-		CCNA_00136	0.18	-0.9
145,570	-		CCNA_00136	0.18	-0.9
145,570	-		CCNA_00136	0.18	-1.4
145,570	-		CCNA_00136	0.18	-0.0
145,587	-		CCNA_00136	0.19	-0.9
145,594	-		CCNA_00136	0.19	-1.0
145,594	-		CCNA_00136	0.19	+0.1
145,603	+		CCNA_00136	0.20	-1.3
145,603	+		CCNA_00136	0.20	-1.8
145,603	+		CCNA_00136	0.20	-0.5
145,616	-		CCNA_00136	0.20	-2.0
145,632	-		CCNA_00136	0.21	-0.0
145,632	-		CCNA_00136	0.21	-1.8
145,632	-		CCNA_00136	0.21	-1.9
145,632	-		CCNA_00136	0.21	-2.1
145,646	-		CCNA_00136	0.22	+0.2
145,655	+		CCNA_00136	0.23	-1.5
145,703	+		CCNA_00136	0.26	-0.6
145,774	-		CCNA_00136	0.30	-0.0
145,774	-		CCNA_00136	0.30	-0.3
145,774	-		CCNA_00136	0.30	-0.8
145,775	+		CCNA_00136	0.30	-0.8
145,842	-		CCNA_00136	0.34	-0.6
145,869	+		CCNA_00136	0.35	-0.7
145,877	-		CCNA_00136	0.36	-0.5
145,958	-		CCNA_00136	0.41	+0.5
145,958	-		CCNA_00136	0.41	-0.6
146,025	-		CCNA_00136	0.45	-0.6
146,033	-		CCNA_00136	0.45	-0.0
146,132	+		CCNA_00136	0.51	-0.2
146,151	-		CCNA_00136	0.52	+1.1
146,156	-		CCNA_00136	0.53	-1.0
146,158	-		CCNA_00136	0.53	-1.2
146,173	+		CCNA_00136	0.54	+0.5
146,196	+		CCNA_00136	0.55	-2.1
146,196	+		CCNA_00136	0.55	-0.3
146,196	+		CCNA_00136	0.55	+0.7
146,196	+		CCNA_00136	0.55	-1.4
146,196	+		CCNA_00136	0.55	-2.9
146,204	-		CCNA_00136	0.55	-0.8
146,204	-		CCNA_00136	0.55	-0.8
146,204	-		CCNA_00136	0.55	-3.1
146,206	-		CCNA_00136	0.56	-0.2
146,267	+		CCNA_00136	0.59	-1.7
146,350	+		CCNA_00136	0.64	-0.2
146,378	+		CCNA_00136	0.66	+0.1
146,378	+		CCNA_00136	0.66	-1.8
146,383	+		CCNA_00136	0.66	-2.6
146,386	-		CCNA_00136	0.66	-0.9
146,401	-		CCNA_00136	0.67	-1.1
146,408	+		CCNA_00136	0.68	-2.0
146,463	+		CCNA_00136	0.71	-0.3
146,464	-		CCNA_00136	0.71	-1.3
146,490	-		CCNA_00136	0.72	-0.9
146,493	-		CCNA_00136	0.73	-1.3
146,495	-		CCNA_00136	0.73	-1.1
146,618	+		CCNA_00136	0.80	-0.6
146,619	+		CCNA_00136	0.80	+0.8
146,626	-		CCNA_00136	0.81	-2.4
146,691	+		CCNA_00136	0.84	-1.3
146,721	-		CCNA_00136	0.86	-0.4
146,811	+				-0.9
146,857	+				+1.3
146,866	-				-1.5
146,871	+				-2.5
146,879	-				-1.2
146,908	+				-1.9
146,908	-				-1.3
146,910	+				-2.7
146,910	+				-0.2
147,060	-				-0.9
147,067	+				-1.7
147,080	-				-2.0
147,136	-				-0.4
147,157	+		CCNA_00137	0.11	-2.9
147,256	-		CCNA_00137	0.17	-1.6
147,262	-		CCNA_00137	0.18	-1.1
147,403	-		CCNA_00137	0.27	+2.6
147,408	-		CCNA_00137	0.27	-2.0
147,434	+		CCNA_00137	0.29	+0.3
147,442	-		CCNA_00137	0.30	+0.6
147,564	+		CCNA_00137	0.37	-1.6
147,564	+		CCNA_00137	0.37	-2.3
147,572	-		CCNA_00137	0.38	-0.8
147,572	-		CCNA_00137	0.38	-0.2
147,572	-		CCNA_00137	0.38	-0.4
147,572	-		CCNA_00137	0.38	-0.6
147,572	-		CCNA_00137	0.38	-0.8
147,577	-		CCNA_00137	0.38	-0.6
147,590	-		CCNA_00137	0.39	-0.3
147,627	-		CCNA_00137	0.41	-0.5
147,673	+		CCNA_00137	0.44	-1.7
147,681	-		CCNA_00137	0.45	+0.8
147,805	+		CCNA_00137	0.53	-1.3
147,842	+		CCNA_00137	0.55	-1.4
147,842	+		CCNA_00137	0.55	-0.5
147,850	-		CCNA_00137	0.56	+0.2
147,850	-		CCNA_00137	0.56	+0.2
147,922	+		CCNA_00137	0.61	-1.8
147,922	+		CCNA_00137	0.61	-1.3
147,928	+		CCNA_00137	0.61	-1.3
147,928	+		CCNA_00137	0.61	-3.2
147,928	+		CCNA_00137	0.61	-1.3
147,936	-		CCNA_00137	0.61	-0.4
147,936	-		CCNA_00137	0.61	-0.3
147,936	-		CCNA_00137	0.61	-2.2
147,936	-		CCNA_00137	0.61	-2.7
147,936	-		CCNA_00137	0.61	-2.1
147,941	-		CCNA_00137	0.62	-1.5
147,941	-		CCNA_00137	0.62	-1.2