Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS15795 and CA265_RS15800 are separated by 48 nucleotides CA265_RS15800 and CA265_RS15805 are separated by 21 nucleotides
CA265_RS15795: CA265_RS15795 - dihydroxy-acid dehydratase, at 3,975,962 to 3,977,644
_RS15795
CA265_RS15800: CA265_RS15800 - DNA-binding protein, at 3,977,693 to 3,978,283
_RS15800
CA265_RS15805: CA265_RS15805 - acetolactate synthase, large subunit, biosynthetic type, at 3,978,305 to 3,980,056
_RS15805
Position (kb)
3977
3978
3979 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3976.799 kb on - strand, within CA265_RS15795 at 3976.864 kb on - strand, within CA265_RS15795 at 3976.873 kb on - strand, within CA265_RS15795 at 3976.873 kb on - strand, within CA265_RS15795 at 3976.873 kb on - strand, within CA265_RS15795 at 3976.886 kb on - strand, within CA265_RS15795 at 3977.074 kb on - strand, within CA265_RS15795 at 3977.074 kb on - strand, within CA265_RS15795 at 3977.074 kb on - strand, within CA265_RS15795 at 3977.193 kb on + strand, within CA265_RS15795 at 3977.297 kb on - strand, within CA265_RS15795 at 3977.348 kb on - strand, within CA265_RS15795 at 3977.348 kb on - strand, within CA265_RS15795 at 3977.362 kb on - strand, within CA265_RS15795 at 3977.430 kb on - strand, within CA265_RS15795 at 3977.455 kb on - strand, within CA265_RS15795 at 3977.512 kb on - strand at 3977.563 kb on - strand at 3977.588 kb on - strand at 3977.588 kb on - strand at 3977.588 kb on - strand at 3977.640 kb on - strand at 3977.640 kb on - strand at 3977.677 kb on - strand at 3977.693 kb on - strand at 3977.720 kb on - strand at 3977.818 kb on + strand, within CA265_RS15800 at 3977.818 kb on + strand, within CA265_RS15800 at 3977.821 kb on + strand, within CA265_RS15800 at 3978.062 kb on - strand, within CA265_RS15800 at 3978.142 kb on - strand, within CA265_RS15800 at 3978.152 kb on - strand, within CA265_RS15800 at 3978.238 kb on - strand at 3978.281 kb on + strand at 3978.285 kb on - strand at 3978.300 kb on + strand at 3978.304 kb on + strand at 3978.322 kb on + strand at 3978.327 kb on + strand at 3978.406 kb on - strand at 3978.461 kb on - strand at 3978.461 kb on - strand at 3978.465 kb on - strand at 3978.639 kb on + strand, within CA265_RS15805 at 3978.640 kb on - strand, within CA265_RS15805 at 3978.688 kb on - strand, within CA265_RS15805 at 3978.688 kb on - strand, within CA265_RS15805 at 3978.731 kb on - strand, within CA265_RS15805 at 3978.997 kb on - strand, within CA265_RS15805 at 3979.123 kb on - strand, within CA265_RS15805 at 3979.133 kb on - strand, within CA265_RS15805 at 3979.142 kb on - strand, within CA265_RS15805 at 3979.259 kb on - strand, within CA265_RS15805 at 3979.259 kb on - strand, within CA265_RS15805 at 3979.264 kb on - strand, within CA265_RS15805
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 3,976,799 - CA265_RS15795 0.50 -4.2 3,976,864 - CA265_RS15795 0.54 -2.0 3,976,873 - CA265_RS15795 0.54 -1.7 3,976,873 - CA265_RS15795 0.54 -1.0 3,976,873 - CA265_RS15795 0.54 -3.7 3,976,886 - CA265_RS15795 0.55 -2.1 3,977,074 - CA265_RS15795 0.66 -2.0 3,977,074 - CA265_RS15795 0.66 -3.6 3,977,074 - CA265_RS15795 0.66 -2.0 3,977,193 + CA265_RS15795 0.73 -1.7 3,977,297 - CA265_RS15795 0.79 -3.6 3,977,348 - CA265_RS15795 0.82 -3.0 3,977,348 - CA265_RS15795 0.82 -4.7 3,977,362 - CA265_RS15795 0.83 -0.7 3,977,430 - CA265_RS15795 0.87 -2.7 3,977,455 - CA265_RS15795 0.89 -2.0 3,977,512 - -3.2 3,977,563 - -4.1 3,977,588 - -2.3 3,977,588 - -2.4 3,977,588 - -3.7 3,977,640 - -2.8 3,977,640 - -4.7 3,977,677 - -2.7 3,977,693 - -3.4 3,977,720 - -5.2 3,977,818 + CA265_RS15800 0.21 -2.1 3,977,818 + CA265_RS15800 0.21 -1.1 3,977,821 + CA265_RS15800 0.22 +0.3 3,978,062 - CA265_RS15800 0.62 -3.9 3,978,142 - CA265_RS15800 0.76 -3.5 3,978,152 - CA265_RS15800 0.78 -1.4 3,978,238 - -4.0 3,978,281 + +0.4 3,978,285 - -3.6 3,978,300 + -1.5 3,978,304 + -1.7 3,978,322 + -0.4 3,978,327 + -3.2 3,978,406 - -3.0 3,978,461 - -2.3 3,978,461 - -3.4 3,978,465 - -2.2 3,978,639 + CA265_RS15805 0.19 -0.7 3,978,640 - CA265_RS15805 0.19 -4.4 3,978,688 - CA265_RS15805 0.22 -3.4 3,978,688 - CA265_RS15805 0.22 -5.0 3,978,731 - CA265_RS15805 0.24 -1.2 3,978,997 - CA265_RS15805 0.39 -2.6 3,979,123 - CA265_RS15805 0.47 -3.4 3,979,133 - CA265_RS15805 0.47 -3.6 3,979,142 - CA265_RS15805 0.48 -3.8 3,979,259 - CA265_RS15805 0.54 -5.2 3,979,259 - CA265_RS15805 0.54 -3.2 3,979,264 - CA265_RS15805 0.55 -3.4
Or see this region's nucleotide sequence