Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2163

Experiment: Tetracycline 0.00125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.00125 mg/ml
2,244,069	-		Synpcc7942_2161	0.29	+1.2
2,244,196	-		Synpcc7942_2161	0.48	+0.1
2,244,201	-		Synpcc7942_2161	0.49	+3.1
2,244,201	-		Synpcc7942_2161	0.49	-1.6
2,244,201	-		Synpcc7942_2161	0.49	-0.0
2,244,210	+		Synpcc7942_2161	0.50	+0.5
2,244,395	+		Synpcc7942_2161	0.78	+1.0
2,244,431	+		Synpcc7942_2161	0.84	+0.5
2,244,431	+		Synpcc7942_2161	0.84	-1.6
2,244,431	+		Synpcc7942_2161	0.84	+2.5
2,244,478	+				-0.0
2,244,682	-				+0.6
2,244,682	-				+0.3
2,244,716	+				-0.0
2,244,740	+				-1.0
2,244,764	-		Synpcc7942_2162	0.18	+1.3
2,244,787	-		Synpcc7942_2162	0.29	-0.0
2,244,804	-		Synpcc7942_2162	0.37	-0.0
2,244,836	+		Synpcc7942_2162	0.51	+0.5
2,244,839	-		Synpcc7942_2162	0.53	-0.6
2,244,839	-		Synpcc7942_2162	0.53	+1.5
2,244,844	-		Synpcc7942_2162	0.55	+0.5
2,244,875	-		Synpcc7942_2162	0.69	+2.6
2,244,923	-				+0.3
2,244,923	-				+1.0
2,244,925	+				-0.7
2,244,925	+				+0.2
2,244,967	+				-0.6
2,244,975	-				-0.8
2,245,000	+				+3.8
2,245,033	+				+0.7
2,245,033	+				-0.0
2,245,033	+				+1.5
2,245,040	+				+1.5
2,245,041	-				+1.3
2,245,078	+				+2.8
2,245,092	-		Synpcc7942_2163	0.11	+2.3
2,245,125	-		Synpcc7942_2163	0.18	+2.5
2,245,139	+		Synpcc7942_2163	0.21	-0.0
2,245,140	-		Synpcc7942_2163	0.21	+1.5
2,245,147	-		Synpcc7942_2163	0.22	+0.5
2,245,147	-		Synpcc7942_2163	0.22	-0.4
2,245,163	-		Synpcc7942_2163	0.26	+2.0
2,245,185	+		Synpcc7942_2163	0.30	-0.0
2,245,210	+		Synpcc7942_2163	0.35	+0.7
2,245,266	+		Synpcc7942_2163	0.47	-1.6
2,245,295	+		Synpcc7942_2163	0.53	-0.0
2,245,308	-				-0.0
2,245,318	-		Synpcc7942_2163	0.57	-1.0
2,245,319	-		Synpcc7942_2163	0.58	+1.6
2,245,326	-		Synpcc7942_2163	0.59	-0.0
2,245,329	-		Synpcc7942_2163	0.60	-0.0
2,245,346	-		Synpcc7942_2163	0.63	-1.5
2,245,383	+		Synpcc7942_2163	0.71	-0.6
2,245,393	+		Synpcc7942_2163	0.73	-1.0
2,245,393	+		Synpcc7942_2163	0.73	+0.8
2,245,393	+		Synpcc7942_2163	0.73	-0.0
2,245,393	+		Synpcc7942_2163	0.73	-0.0
2,245,401	-		Synpcc7942_2163	0.74	+0.5
2,245,401	-		Synpcc7942_2163	0.74	-0.6
2,245,401	-		Synpcc7942_2163	0.74	+1.5
2,245,401	-		Synpcc7942_2163	0.74	-0.0
2,245,401	-		Synpcc7942_2163	0.74	-1.0
2,245,410	+		Synpcc7942_2163	0.76	-0.6
2,245,421	-		Synpcc7942_2163	0.79	+2.5
2,245,423	+		Synpcc7942_2163	0.79	+1.8
2,245,453	+		Synpcc7942_2163	0.85	+0.5
2,245,516	-				-0.2
2,245,520	+				+1.0
2,245,530	+				-1.6
2,245,530	+				-0.4
2,245,530	+				+1.5
2,245,530	+				-1.0
2,245,530	+				+1.1
2,245,530	+				+2.0
2,245,538	-				+0.5
2,245,538	-				+1.4
2,245,547	+				-0.6
2,245,553	-				+0.4
2,245,555	-				+2.0
2,245,603	+				+1.1
2,245,603	+				+3.0
2,245,634	+				+2.1
2,245,639	+				+1.0
2,245,688	-				+2.2
2,245,697	+				+1.0
2,245,700	+				+0.4
2,245,732	+				-0.0
2,245,748	-		Synpcc7942_2164	0.10	-0.0
2,245,785	-		Synpcc7942_2164	0.13	+0.5
2,245,798	-		Synpcc7942_2164	0.14	-0.0
2,245,834	-		Synpcc7942_2164	0.16	-0.0
2,245,878	-		Synpcc7942_2164	0.20	-1.0
2,245,905	+		Synpcc7942_2164	0.22	+1.6
2,245,913	-		Synpcc7942_2164	0.22	+0.2
2,245,941	+		Synpcc7942_2164	0.24	+1.0
2,245,941	+		Synpcc7942_2164	0.24	+1.4
2,245,944	-		Synpcc7942_2164	0.24	-0.0
2,245,945	-		Synpcc7942_2164	0.24	-0.4
2,245,946	+		Synpcc7942_2164	0.24	+0.9
2,245,959	-		Synpcc7942_2164	0.25	+1.5
2,245,960	-		Synpcc7942_2164	0.25	-0.0
2,245,982	-		Synpcc7942_2164	0.27	+1.0
2,246,060	+		Synpcc7942_2164	0.33	+1.4
2,246,061	-		Synpcc7942_2164	0.33	+0.7
2,246,117	+		Synpcc7942_2164	0.37	-1.0
2,246,130	-		Synpcc7942_2164	0.38	-1.6
2,246,133	+		Synpcc7942_2164	0.38	+1.4
2,246,133	+		Synpcc7942_2164	0.38	+0.6
2,246,133	+		Synpcc7942_2164	0.38	+1.0
2,246,133	+		Synpcc7942_2164	0.38	+0.1
2,246,133	+		Synpcc7942_2164	0.38	+1.5
2,246,133	+		Synpcc7942_2164	0.38	+0.7
2,246,133	+		Synpcc7942_2164	0.38	-0.0
2,246,140	-		Synpcc7942_2164	0.38	+1.8
2,246,141	-		Synpcc7942_2164	0.39	+2.5
2,246,141	-		Synpcc7942_2164	0.39	+1.5
2,246,141	-		Synpcc7942_2164	0.39	+0.7
2,246,141	-		Synpcc7942_2164	0.39	-1.6
2,246,141	-		Synpcc7942_2164	0.39	+1.0
2,246,149	-		Synpcc7942_2164	0.39	-0.6
2,246,151	-		Synpcc7942_2164	0.39	-0.0
2,246,151	-		Synpcc7942_2164	0.39	+1.1
2,246,173	+		Synpcc7942_2164	0.41	+0.7
2,246,181	-		Synpcc7942_2164	0.41	+1.3
2,246,181	-		Synpcc7942_2164	0.41	+1.0
2,246,190	+		Synpcc7942_2164	0.42	-0.6
2,246,195	+		Synpcc7942_2164	0.42	+1.5
2,246,203	-		Synpcc7942_2164	0.43	+2.8
2,246,218	+		Synpcc7942_2164	0.44	+2.8
2,246,218	+		Synpcc7942_2164	0.44	+2.5
2,246,258	+		Synpcc7942_2164	0.47	-0.0
2,246,260	+		Synpcc7942_2164	0.47	-1.0
2,246,277	-		Synpcc7942_2164	0.48	+1.4
2,246,282	+		Synpcc7942_2164	0.49	+1.0
2,246,305	-		Synpcc7942_2164	0.50	+2.1
2,246,307	+		Synpcc7942_2164	0.51	+2.2
2,246,322	+		Synpcc7942_2164	0.52	+1.5
2,246,343	+		Synpcc7942_2164	0.53	-0.5
2,246,343	+		Synpcc7942_2164	0.53	+1.1
2,246,349	+		Synpcc7942_2164	0.54	-0.0
2,246,350	+		Synpcc7942_2164	0.54	+1.1
2,246,357	-		Synpcc7942_2164	0.54	+3.1
2,246,357	-		Synpcc7942_2164	0.54	-0.0
2,246,358	-		Synpcc7942_2164	0.54	+1.8
2,246,372	-		Synpcc7942_2164	0.55	+1.4
2,246,382	-		Synpcc7942_2164	0.56	-0.6
2,246,386	+		Synpcc7942_2164	0.56	+0.7
2,246,386	+		Synpcc7942_2164	0.56	+1.4
2,246,386	+		Synpcc7942_2164	0.56	+0.5
2,246,386	+		Synpcc7942_2164	0.56	+1.5
2,246,386	+		Synpcc7942_2164	0.56	+0.9
2,246,394	-		Synpcc7942_2164	0.57	+2.0
2,246,474	-		Synpcc7942_2164	0.63	+1.0
2,246,474	-		Synpcc7942_2164	0.63	-0.5
2,246,515	-		Synpcc7942_2164	0.66	+0.1
2,246,519	+		Synpcc7942_2164	0.66	+1.8