Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2090

Experiment: Tetracycline 0.00125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.00125 mg/ml
2,169,582	+				+1.8
2,169,582	+				+1.6
2,169,582	+				+1.7
2,169,582	+				+1.0
2,169,582	+				-0.0
2,169,592	+				+2.1
2,169,592	+				+3.0
2,169,592	+				-1.6
2,169,592	+				+0.4
2,169,617	-				-1.0
2,169,672	-				+1.6
2,169,673	+				-0.0
2,169,679	-				+1.9
2,169,684	+				+2.3
2,169,706	-				-0.0
2,169,706	-				-0.7
2,169,732	-				+1.0
2,169,769	+				+2.6
2,169,777	-				-1.4
2,169,797	+				+2.3
2,169,802	+				-0.6
2,171,174	+				+0.6
2,171,182	-				+0.4
2,171,210	+				+2.0
2,171,210	+				+1.9
2,171,218	-				+3.0
2,171,248	+				+0.6
2,171,312	-				-0.7
2,171,360	-				-1.0
2,171,377	+				-2.3
2,171,416	+				-1.0
2,171,424	-				-0.0
2,171,435	-				-2.0
2,171,496	+				-0.0
2,171,551	+				-2.3
2,171,551	+				-0.0
2,171,571	+				-0.6
2,171,588	-				-1.6
2,171,600	+				-3.3
2,171,605	+				+1.3
2,171,608	-				-1.6
2,171,619	+	ndhF3	Synpcc7942_2091	0.10	+0.3
2,171,633	-	ndhF3	Synpcc7942_2091	0.11	+0.2
2,171,634	-	ndhF3	Synpcc7942_2091	0.11	-1.0
2,171,637	-	ndhF3	Synpcc7942_2091	0.11	+1.6
2,171,639	+	ndhF3	Synpcc7942_2091	0.11	-1.0
2,171,647	-	ndhF3	Synpcc7942_2091	0.12	-0.3
2,171,654	-	ndhF3	Synpcc7942_2091	0.12	-0.0
2,171,661	-	ndhF3	Synpcc7942_2091	0.13	-2.0
2,171,673	-	ndhF3	Synpcc7942_2091	0.13	-0.0
2,171,717	-	ndhF3	Synpcc7942_2091	0.16	+0.9
2,171,723	+	ndhF3	Synpcc7942_2091	0.16	-0.7
2,171,733	+	ndhF3	Synpcc7942_2091	0.16	-2.6
2,171,738	+	ndhF3	Synpcc7942_2091	0.17	-2.3
2,171,750	+	ndhF3	Synpcc7942_2091	0.17	+2.6
2,171,793	-	ndhF3	Synpcc7942_2091	0.20	-1.8
2,171,802	-	ndhF3	Synpcc7942_2091	0.20	-1.6
2,171,812	-	ndhF3	Synpcc7942_2091	0.21	-1.0
2,171,814	+	ndhF3	Synpcc7942_2091	0.21	-1.6
2,171,824	+	ndhF3	Synpcc7942_2091	0.21	-3.0
2,171,826	+				+1.0
2,171,832	-	ndhF3	Synpcc7942_2091	0.22	-1.6
2,171,888	-	ndhF3	Synpcc7942_2091	0.25	-1.6
2,171,925	+	ndhF3	Synpcc7942_2091	0.27	-0.0
2,171,925	+	ndhF3	Synpcc7942_2091	0.27	-0.0
2,171,925	+	ndhF3	Synpcc7942_2091	0.27	-1.0
2,171,933	-	ndhF3	Synpcc7942_2091	0.27	-0.0
2,172,060	+	ndhF3	Synpcc7942_2091	0.34	+1.0
2,172,062	+	ndhF3	Synpcc7942_2091	0.34	-1.6
2,172,133	+	ndhF3	Synpcc7942_2091	0.38	-0.6
2,172,167	+	ndhF3	Synpcc7942_2091	0.40	-1.6