Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2078

Experiment: Tetracycline 0.00125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.00125 mg/ml
2,155,037	+				+0.1
2,155,047	+				+2.5
2,155,055	-				+1.6
2,155,092	-				-0.0
2,155,157	+				-1.0
2,155,158	-				+1.7
2,155,165	-				+1.0
2,155,170	-				+2.0
2,155,177	-		Synpcc7942_2077	0.11	+1.8
2,155,178	+		Synpcc7942_2077	0.11	+0.9
2,155,188	+		Synpcc7942_2077	0.13	+2.0
2,155,193	+		Synpcc7942_2077	0.14	+1.2
2,155,317	+		Synpcc7942_2077	0.44	-0.6
2,155,338	+		Synpcc7942_2077	0.49	+2.2
2,155,372	+		Synpcc7942_2077	0.57	+1.0
2,155,409	+		Synpcc7942_2077	0.66	+1.0
2,155,448	+				-1.6
2,155,456	+		Synpcc7942_2077	0.77	-0.0
2,155,473	+		Synpcc7942_2077	0.82	+2.6
2,155,498	-		Synpcc7942_2077	0.88	-1.0
2,155,520	+				-0.0
2,155,539	+				+0.7
2,155,551	-				-0.0
2,155,559	+				-1.0
2,155,559	+				+0.6
2,155,572	+				+1.0
2,155,616	+				+2.3
2,155,776	+				+0.4
2,155,776	+				+2.6
2,155,776	+				+2.2
2,155,776	+				+2.6
2,155,776	+				-1.0
2,155,776	+				-1.0
2,155,776	+				+1.0
2,155,776	+				+1.2
2,155,778	+				+0.6
2,155,784	-				+2.3
2,155,784	-				+2.1
2,155,784	-				-0.0
2,155,785	-				-0.6
2,155,786	-				-0.0
2,155,788	+				-1.0
2,155,790	+				+0.6
2,155,791	-				+0.2
2,155,798	-				-0.0
2,155,813	+				+0.6
2,155,817	-				+2.0
2,155,821	-				-0.0
2,155,878	+				-2.6
2,155,919	+				-1.0
2,155,991	-	pgam	Synpcc7942_2078	0.10	+2.6
2,155,994	+	pgam	Synpcc7942_2078	0.10	+1.3
2,156,016	+	pgam	Synpcc7942_2078	0.14	-0.0
2,156,032	+	pgam	Synpcc7942_2078	0.16	+1.9
2,156,070	-	pgam	Synpcc7942_2078	0.22	+1.0
2,156,080	-	pgam	Synpcc7942_2078	0.24	+1.2
2,156,113	+	pgam	Synpcc7942_2078	0.29	+2.7
2,156,113	-	pgam	Synpcc7942_2078	0.29	-0.0
2,156,122	+	pgam	Synpcc7942_2078	0.31	+0.4
2,156,149	-	pgam	Synpcc7942_2078	0.35	-1.3
2,156,185	+	pgam	Synpcc7942_2078	0.40	+2.0
2,156,185	+	pgam	Synpcc7942_2078	0.40	-0.0
2,156,201	-	pgam	Synpcc7942_2078	0.43	+1.4
2,156,235	+	pgam	Synpcc7942_2078	0.48	+1.8
2,156,243	-	pgam	Synpcc7942_2078	0.49	-0.7
2,156,249	+	pgam	Synpcc7942_2078	0.50	-0.0
2,156,254	+	pgam	Synpcc7942_2078	0.51	-0.0
2,156,259	+	pgam	Synpcc7942_2078	0.52	+1.2
2,156,259	+	pgam	Synpcc7942_2078	0.52	+3.1
2,156,272	-	pgam	Synpcc7942_2078	0.54	-0.4
2,156,293	-	pgam	Synpcc7942_2078	0.57	+2.3
2,156,303	+	pgam	Synpcc7942_2078	0.59	+1.6
2,156,310	+				-0.0
2,156,323	-	pgam	Synpcc7942_2078	0.62	+2.0
2,156,325	+	pgam	Synpcc7942_2078	0.62	+0.4
2,156,366	-	pgam	Synpcc7942_2078	0.69	+1.6
2,156,373	+	pgam	Synpcc7942_2078	0.70	+0.4
2,156,397	-	pgam	Synpcc7942_2078	0.74	-1.0
2,156,404	+	pgam	Synpcc7942_2078	0.75	+0.7
2,156,404	+	pgam	Synpcc7942_2078	0.75	+1.7
2,156,404	+	pgam	Synpcc7942_2078	0.75	+2.0
2,156,404	+	pgam	Synpcc7942_2078	0.75	-1.0
2,156,404	+	pgam	Synpcc7942_2078	0.75	+1.3
2,156,412	-	pgam	Synpcc7942_2078	0.76	+1.4
2,156,412	-	pgam	Synpcc7942_2078	0.76	-0.0
2,156,444	+	pgam	Synpcc7942_2078	0.81	-1.0
2,156,449	+	pgam	Synpcc7942_2078	0.82	+1.4
2,156,450	+	pgam	Synpcc7942_2078	0.82	+0.4
2,156,452	-	pgam	Synpcc7942_2078	0.82	+1.4
2,156,457	-	pgam	Synpcc7942_2078	0.83	-2.6
2,156,491	+	pgam	Synpcc7942_2078	0.88	-0.2
2,156,519	-				+1.4
2,156,541	+				+3.0
2,156,563	-				+2.3
2,156,613	+				-0.6
2,156,621	-				+1.8
2,156,633	+				+0.6
2,156,641	-				+1.0
2,156,641	-				+1.0
2,156,651	+				+0.8
2,156,651	+				+0.5
2,156,657	-				-0.0
2,156,716	+	ackA	Synpcc7942_2079	0.12	+1.9
2,156,745	+	ackA	Synpcc7942_2079	0.14	-0.7
2,156,769	-	ackA	Synpcc7942_2079	0.16	+1.0
2,156,769	-	ackA	Synpcc7942_2079	0.16	+0.7
2,156,796	+	ackA	Synpcc7942_2079	0.19	+1.5
2,156,820	+	ackA	Synpcc7942_2079	0.21	+2.6
2,156,827	-	ackA	Synpcc7942_2079	0.21	+2.1
2,156,829	+	ackA	Synpcc7942_2079	0.22	+2.7
2,156,829	+	ackA	Synpcc7942_2079	0.22	-1.0
2,156,837	-	ackA	Synpcc7942_2079	0.22	-1.0
2,156,873	-				+1.6
2,156,878	-	ackA	Synpcc7942_2079	0.26	-1.0
2,156,893	+	ackA	Synpcc7942_2079	0.27	+1.6
2,156,899	+	ackA	Synpcc7942_2079	0.27	-0.0
2,156,935	+	ackA	Synpcc7942_2079	0.31	-0.0
2,156,935	+	ackA	Synpcc7942_2079	0.31	+1.3
2,156,941	-	ackA	Synpcc7942_2079	0.31	+1.7
2,156,943	-	ackA	Synpcc7942_2079	0.31	+0.6
2,156,974	+	ackA	Synpcc7942_2079	0.34	+1.4
2,156,976	+	ackA	Synpcc7942_2079	0.34	+1.9
2,156,986	+	ackA	Synpcc7942_2079	0.35	+2.3
2,156,994	-	ackA	Synpcc7942_2079	0.36	+2.0
2,156,996	+	ackA	Synpcc7942_2079	0.36	-0.0
2,157,004	-	ackA	Synpcc7942_2079	0.36	-1.0
2,157,035	-	ackA	Synpcc7942_2079	0.39	+2.2
2,157,040	-	ackA	Synpcc7942_2079	0.39	+2.1
2,157,066	+	ackA	Synpcc7942_2079	0.42	+1.4
2,157,074	-	ackA	Synpcc7942_2079	0.42	-2.0
2,157,080	-				+1.6
2,157,096	+	ackA	Synpcc7942_2079	0.44	+1.6
2,157,105	+	ackA	Synpcc7942_2079	0.45	+1.8
2,157,107	+	ackA	Synpcc7942_2079	0.45	+2.0
2,157,113	-	ackA	Synpcc7942_2079	0.46	+2.3
2,157,114	+	ackA	Synpcc7942_2079	0.46	+1.0
2,157,155	-	ackA	Synpcc7942_2079	0.49	-0.3
2,157,166	-	ackA	Synpcc7942_2079	0.50	+0.1
2,157,168	+	ackA	Synpcc7942_2079	0.50	-0.7
2,157,201	+	ackA	Synpcc7942_2079	0.53	+1.4
2,157,201	+	ackA	Synpcc7942_2079	0.53	-0.0
2,157,203	+	ackA	Synpcc7942_2079	0.53	-0.5
2,157,226	-	ackA	Synpcc7942_2079	0.55	+0.6
2,157,248	+	ackA	Synpcc7942_2079	0.57	-0.0
2,157,279	+	ackA	Synpcc7942_2079	0.60	+0.6
2,157,287	-	ackA	Synpcc7942_2079	0.60	+3.4
2,157,287	-	ackA	Synpcc7942_2079	0.60	+2.4
2,157,372	+	ackA	Synpcc7942_2079	0.68	+1.6
2,157,399	-	ackA	Synpcc7942_2079	0.70	+0.6
2,157,410	-	ackA	Synpcc7942_2079	0.71	+1.0
2,157,414	+	ackA	Synpcc7942_2079	0.71	-1.0
2,157,458	+	ackA	Synpcc7942_2079	0.75	+0.8
2,157,466	-	ackA	Synpcc7942_2079	0.75	-1.0
2,157,466	-	ackA	Synpcc7942_2079	0.75	+1.1
2,157,481	-	ackA	Synpcc7942_2079	0.77	-1.0
2,157,489	-	ackA	Synpcc7942_2079	0.77	-0.0
2,157,549	+	ackA	Synpcc7942_2079	0.82	+1.0
2,157,549	+	ackA	Synpcc7942_2079	0.82	-1.0
2,157,554	+	ackA	Synpcc7942_2079	0.83	+1.6
2,157,559	+	ackA	Synpcc7942_2079	0.83	+0.2