Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS21190 and HSERO_RS21195 are separated by 49 nucleotides HSERO_RS21195 and HSERO_RS21200 are separated by 84 nucleotides
HSERO_RS21190: HSERO_RS21190 - hypothetical protein, at 4,846,704 to 4,848,266
_RS21190
HSERO_RS21195: HSERO_RS21195 - hypothetical protein, at 4,848,316 to 4,849,686
_RS21195
HSERO_RS21200: HSERO_RS21200 - glycosyl transferase family 1, at 4,849,771 to 4,851,258
_RS21200
Position (kb) 4848
4849
4850 Strain fitness (log2 ratio) -1
0
1 at 4847.444 kb on + strand, within HSERO_RS21190 at 4847.452 kb on - strand, within HSERO_RS21190 at 4847.453 kb on - strand, within HSERO_RS21190 at 4847.471 kb on + strand, within HSERO_RS21190 at 4847.511 kb on + strand at 4847.519 kb on - strand, within HSERO_RS21190 at 4847.604 kb on + strand, within HSERO_RS21190 at 4847.612 kb on - strand, within HSERO_RS21190 at 4847.851 kb on - strand, within HSERO_RS21190 at 4847.959 kb on - strand, within HSERO_RS21190 at 4848.082 kb on + strand, within HSERO_RS21190 at 4848.095 kb on - strand, within HSERO_RS21190 at 4848.295 kb on - strand at 4848.482 kb on + strand, within HSERO_RS21195 at 4848.492 kb on + strand, within HSERO_RS21195 at 4848.597 kb on + strand, within HSERO_RS21195 at 4848.681 kb on - strand, within HSERO_RS21195 at 4848.693 kb on + strand, within HSERO_RS21195 at 4848.739 kb on + strand, within HSERO_RS21195 at 4848.995 kb on + strand, within HSERO_RS21195 at 4849.084 kb on - strand, within HSERO_RS21195 at 4849.089 kb on - strand, within HSERO_RS21195 at 4849.177 kb on - strand, within HSERO_RS21195 at 4849.186 kb on + strand, within HSERO_RS21195 at 4849.212 kb on - strand, within HSERO_RS21195 at 4849.230 kb on - strand, within HSERO_RS21195 at 4849.302 kb on - strand at 4849.533 kb on + strand, within HSERO_RS21195 at 4849.541 kb on - strand, within HSERO_RS21195 at 4849.595 kb on - strand at 4849.636 kb on - strand at 4849.708 kb on + strand at 4849.708 kb on + strand at 4849.748 kb on - strand at 4849.788 kb on - strand at 4849.788 kb on - strand at 4849.865 kb on + strand at 4849.975 kb on - strand, within HSERO_RS21200 at 4850.157 kb on + strand, within HSERO_RS21200 at 4850.182 kb on + strand, within HSERO_RS21200 at 4850.450 kb on + strand, within HSERO_RS21200 at 4850.594 kb on + strand, within HSERO_RS21200 at 4850.602 kb on - strand, within HSERO_RS21200 at 4850.649 kb on + strand, within HSERO_RS21200
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 4,847,444 + HSERO_RS21190 0.47 +0.0 4,847,452 - HSERO_RS21190 0.48 +0.5 4,847,453 - HSERO_RS21190 0.48 +0.8 4,847,471 + HSERO_RS21190 0.49 -0.4 4,847,511 + +1.0 4,847,519 - HSERO_RS21190 0.52 +1.0 4,847,604 + HSERO_RS21190 0.58 +0.6 4,847,612 - HSERO_RS21190 0.58 +0.6 4,847,851 - HSERO_RS21190 0.73 +0.9 4,847,959 - HSERO_RS21190 0.80 +0.0 4,848,082 + HSERO_RS21190 0.88 +0.3 4,848,095 - HSERO_RS21190 0.89 +0.3 4,848,295 - -0.3 4,848,482 + HSERO_RS21195 0.12 +0.4 4,848,492 + HSERO_RS21195 0.13 +0.0 4,848,597 + HSERO_RS21195 0.20 +0.0 4,848,681 - HSERO_RS21195 0.27 -0.4 4,848,693 + HSERO_RS21195 0.27 +0.6 4,848,739 + HSERO_RS21195 0.31 +0.1 4,848,995 + HSERO_RS21195 0.50 -0.7 4,849,084 - HSERO_RS21195 0.56 -0.4 4,849,089 - HSERO_RS21195 0.56 +0.3 4,849,177 - HSERO_RS21195 0.63 +1.0 4,849,186 + HSERO_RS21195 0.63 +0.4 4,849,212 - HSERO_RS21195 0.65 -1.0 4,849,230 - HSERO_RS21195 0.67 -0.0 4,849,302 - +1.0 4,849,533 + HSERO_RS21195 0.89 -0.1 4,849,541 - HSERO_RS21195 0.89 +0.4 4,849,595 - -0.2 4,849,636 - +1.0 4,849,708 + +0.3 4,849,708 + -0.0 4,849,748 - -0.2 4,849,788 - +0.5 4,849,788 - -1.5 4,849,865 + +0.0 4,849,975 - HSERO_RS21200 0.14 +0.2 4,850,157 + HSERO_RS21200 0.26 -0.5 4,850,182 + HSERO_RS21200 0.28 -0.1 4,850,450 + HSERO_RS21200 0.46 +0.3 4,850,594 + HSERO_RS21200 0.55 -0.3 4,850,602 - HSERO_RS21200 0.56 +1.2 4,850,649 + HSERO_RS21200 0.59 +0.3
Or see this region's nucleotide sequence