Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18710 and HSERO_RS18715 are separated by 190 nucleotides HSERO_RS18715 and HSERO_RS18720 are separated by 423 nucleotides
HSERO_RS18710: HSERO_RS18710 - hypothetical protein, at 4,295,054 to 4,296,262
_RS18710
HSERO_RS18715: HSERO_RS18715 - MFS transporter, at 4,296,453 to 4,297,763
_RS18715
HSERO_RS18720: HSERO_RS18720 - transcriptional regulator, at 4,298,187 to 4,298,897
_RS18720
Position (kb) 4296
4297
4298 Strain fitness (log2 ratio) -1
0
1
2
3 at 4295.579 kb on + strand, within HSERO_RS18710 at 4295.690 kb on - strand, within HSERO_RS18710 at 4295.734 kb on + strand, within HSERO_RS18710 at 4295.798 kb on - strand, within HSERO_RS18710 at 4295.848 kb on + strand, within HSERO_RS18710 at 4295.848 kb on + strand, within HSERO_RS18710 at 4295.848 kb on + strand, within HSERO_RS18710 at 4295.848 kb on + strand, within HSERO_RS18710 at 4295.856 kb on - strand, within HSERO_RS18710 at 4296.317 kb on + strand at 4296.520 kb on + strand at 4296.523 kb on - strand at 4296.528 kb on - strand at 4296.558 kb on - strand at 4296.558 kb on - strand at 4296.668 kb on - strand, within HSERO_RS18715 at 4296.710 kb on + strand, within HSERO_RS18715 at 4296.712 kb on + strand, within HSERO_RS18715 at 4296.718 kb on - strand, within HSERO_RS18715 at 4296.725 kb on - strand, within HSERO_RS18715 at 4296.779 kb on - strand, within HSERO_RS18715 at 4296.784 kb on - strand, within HSERO_RS18715 at 4296.930 kb on - strand, within HSERO_RS18715 at 4297.038 kb on - strand, within HSERO_RS18715 at 4297.121 kb on + strand, within HSERO_RS18715 at 4297.145 kb on + strand, within HSERO_RS18715 at 4297.247 kb on + strand, within HSERO_RS18715 at 4297.430 kb on + strand, within HSERO_RS18715 at 4297.468 kb on - strand, within HSERO_RS18715 at 4297.555 kb on + strand, within HSERO_RS18715 at 4297.679 kb on + strand at 4297.718 kb on + strand at 4297.726 kb on - strand at 4297.726 kb on - strand at 4297.726 kb on - strand at 4297.826 kb on - strand at 4297.851 kb on - strand at 4297.896 kb on + strand at 4297.897 kb on + strand at 4298.131 kb on - strand at 4298.236 kb on - strand at 4298.244 kb on + strand at 4298.245 kb on + strand at 4298.276 kb on + strand, within HSERO_RS18720 at 4298.276 kb on + strand, within HSERO_RS18720 at 4298.276 kb on + strand, within HSERO_RS18720 at 4298.284 kb on - strand, within HSERO_RS18720 at 4298.305 kb on + strand, within HSERO_RS18720 at 4298.305 kb on + strand, within HSERO_RS18720 at 4298.602 kb on + strand, within HSERO_RS18720 at 4298.602 kb on + strand, within HSERO_RS18720
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 4,295,579 + HSERO_RS18710 0.43 -0.0 4,295,690 - HSERO_RS18710 0.53 -0.5 4,295,734 + HSERO_RS18710 0.56 -0.1 4,295,798 - HSERO_RS18710 0.62 -0.2 4,295,848 + HSERO_RS18710 0.66 -0.2 4,295,848 + HSERO_RS18710 0.66 +0.8 4,295,848 + HSERO_RS18710 0.66 +0.4 4,295,848 + HSERO_RS18710 0.66 +0.1 4,295,856 - HSERO_RS18710 0.66 +0.0 4,296,317 + -0.1 4,296,520 + +1.2 4,296,523 - -0.4 4,296,528 - +0.3 4,296,558 - -0.1 4,296,558 - -0.6 4,296,668 - HSERO_RS18715 0.16 -0.1 4,296,710 + HSERO_RS18715 0.20 -0.7 4,296,712 + HSERO_RS18715 0.20 -0.3 4,296,718 - HSERO_RS18715 0.20 +0.4 4,296,725 - HSERO_RS18715 0.21 +2.0 4,296,779 - HSERO_RS18715 0.25 +0.0 4,296,784 - HSERO_RS18715 0.25 -0.2 4,296,930 - HSERO_RS18715 0.36 +0.3 4,297,038 - HSERO_RS18715 0.45 -0.2 4,297,121 + HSERO_RS18715 0.51 +0.3 4,297,145 + HSERO_RS18715 0.53 -0.3 4,297,247 + HSERO_RS18715 0.61 -0.5 4,297,430 + HSERO_RS18715 0.75 +0.6 4,297,468 - HSERO_RS18715 0.77 -0.2 4,297,555 + HSERO_RS18715 0.84 +0.1 4,297,679 + -0.7 4,297,718 + -0.7 4,297,726 - +0.2 4,297,726 - +2.8 4,297,726 - +2.0 4,297,826 - +0.3 4,297,851 - -0.2 4,297,896 + +0.0 4,297,897 + -0.5 4,298,131 - -0.1 4,298,236 - -0.1 4,298,244 + +0.3 4,298,245 + +0.3 4,298,276 + HSERO_RS18720 0.13 +0.9 4,298,276 + HSERO_RS18720 0.13 -0.6 4,298,276 + HSERO_RS18720 0.13 +0.6 4,298,284 - HSERO_RS18720 0.14 -0.7 4,298,305 + HSERO_RS18720 0.17 -0.5 4,298,305 + HSERO_RS18720 0.17 +0.7 4,298,602 + HSERO_RS18720 0.58 +0.8 4,298,602 + HSERO_RS18720 0.58 +0.4
Or see this region's nucleotide sequence