Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02461

Experiment: PYE with Spectinomycin 0.08 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Spectinomycin 0.08 mg/ml
2,602,732	-		CCNA_02459	0.78	+1.6
2,602,732	-		CCNA_02459	0.78	-0.5
2,602,767	+		CCNA_02459	0.79	+0.5
2,602,767	+		CCNA_02459	0.79	+1.2
2,602,767	+		CCNA_02459	0.79	+1.1
2,602,767	+		CCNA_02459	0.79	+1.6
2,602,767	+		CCNA_02459	0.79	+0.6
2,602,767	+		CCNA_02459	0.79	+0.7
2,602,769	-		CCNA_02459	0.79	+0.5
2,602,769	-		CCNA_02459	0.79	+1.2
2,602,774	+		CCNA_02459	0.80	+0.8
2,602,775	-		CCNA_02459	0.80	-0.7
2,602,775	-		CCNA_02459	0.80	+0.2
2,602,775	-		CCNA_02459	0.80	-1.6
2,602,799	-		CCNA_02459	0.81	-0.6
2,602,831	+		CCNA_02459	0.82	+0.8
2,602,831	+		CCNA_02459	0.82	+0.6
2,602,839	-		CCNA_02459	0.83	-0.5
2,602,840	+		CCNA_02459	0.83	+1.5
2,602,848	-		CCNA_02459	0.83	+1.0
2,602,861	+		CCNA_02459	0.84	-0.1
2,602,875	-		CCNA_02459	0.84	+2.4
2,602,914	+		CCNA_02459	0.86	-0.6
2,602,914	+		CCNA_02459	0.86	+1.4
2,602,922	-		CCNA_02459	0.86	-0.6
2,602,922	-		CCNA_02459	0.86	+0.5
2,602,956	-		CCNA_02459	0.88	+0.2
2,602,996	+		CCNA_02459	0.90	+0.9
2,603,002	+				+0.1
2,603,005	-				+1.4
2,603,009	-				+1.7
2,603,038	-				-0.1
2,603,060	-				+0.5
2,603,062	+				+2.1
2,603,062	+				+0.7
2,603,070	-				+1.6
2,603,084	-				-0.0
2,603,091	+				-0.1
2,603,091	+				+0.2
2,603,091	-				-0.4
2,603,091	-				+0.1
2,603,098	+				-0.1
2,603,099	-				+0.7
2,603,142	+				-0.8
2,603,176	+				+0.8
2,603,195	+				+0.3
2,603,200	+				+0.9
2,603,201	-				-0.2
2,603,201	-				+0.1
2,603,201	-				-0.2
2,603,203	-				+0.4
2,603,205	+				-0.4
2,603,205	+				+1.0
2,603,213	-				+0.4
2,603,213	-				+0.1
2,603,240	+				+0.6
2,603,257	+		CCNA_02460	0.11	-0.9
2,603,295	+		CCNA_02460	0.19	+2.4
2,603,375	+		CCNA_02460	0.36	-0.1
2,603,391	-		CCNA_02460	0.40	+0.7
2,603,393	+		CCNA_02460	0.40	+0.3
2,603,393	+		CCNA_02460	0.40	-1.2
2,603,401	-		CCNA_02460	0.42	+0.3
2,603,416	+		CCNA_02460	0.45	-1.2
2,603,416	+		CCNA_02460	0.45	-1.0
2,603,416	+		CCNA_02460	0.45	-0.3
2,603,421	+		CCNA_02460	0.46	-0.4
2,603,421	+		CCNA_02460	0.46	+1.5
2,603,424	-		CCNA_02460	0.47	-0.4
2,603,424	-		CCNA_02460	0.47	+0.0
2,603,437	+		CCNA_02460	0.50	-1.0
2,603,447	+		CCNA_02460	0.52	-1.3
2,603,479	+		CCNA_02460	0.59	-1.0
2,603,481	+		CCNA_02460	0.59	-0.5
2,603,487	-		CCNA_02460	0.60	-0.4
2,603,520	+		CCNA_02460	0.68	-0.6
2,603,539	+		CCNA_02460	0.72	+1.2
2,603,548	-		CCNA_02460	0.74	-1.2
2,603,548	-		CCNA_02460	0.74	+0.0
2,603,549	+		CCNA_02460	0.74	-1.8
2,603,557	-		CCNA_02460	0.76	-1.2
2,603,557	-		CCNA_02460	0.76	-0.7
2,603,559	-		CCNA_02460	0.76	+0.9
2,603,575	-		CCNA_02460	0.79	-0.2
2,603,577	+		CCNA_02460	0.80	+0.1
2,603,590	-		CCNA_02460	0.83	+0.8
2,603,613	-		CCNA_02460	0.88	+0.2
2,603,673	-				+1.7
2,603,675	+				-0.3
2,603,675	+				-1.6
2,603,683	-				+0.4
2,603,683	-				-0.2
2,603,683	-				-0.2
2,603,683	-				-0.5
2,603,754	+		CCNA_02461	0.10	-1.0
2,603,755	-		CCNA_02461	0.11	-0.1
2,603,755	-		CCNA_02461	0.11	+0.0
2,603,770	-		CCNA_02461	0.14	+0.7
2,603,770	-		CCNA_02461	0.14	+0.2
2,603,790	-		CCNA_02461	0.18	+0.0
2,603,836	+		CCNA_02461	0.28	+0.6
2,603,905	-		CCNA_02461	0.43	+0.9
2,603,935	+		CCNA_02461	0.49	+1.5
2,603,935	-		CCNA_02461	0.49	+0.2
2,603,940	+		CCNA_02461	0.50	-0.1
2,603,948	-		CCNA_02461	0.52	-0.4
2,603,948	-		CCNA_02461	0.52	+0.5
2,603,973	-		CCNA_02461	0.57	+0.0
2,603,990	+		CCNA_02461	0.61	-0.1
2,603,994	-		CCNA_02461	0.62	+0.7
2,604,005	+		CCNA_02461	0.64	-0.1
2,604,013	-		CCNA_02461	0.66	-0.0
2,604,026	-		CCNA_02461	0.69	+0.7
2,604,062	-		CCNA_02461	0.77	+0.1
2,604,065	+		CCNA_02461	0.77	-1.3
2,604,073	-		CCNA_02461	0.79	+2.1
2,604,073	-		CCNA_02461	0.79	+0.8
2,604,114	+		CCNA_02461	0.88	-0.4
2,604,122	-		CCNA_02461	0.89	+1.5
2,604,173	-				-0.0
2,604,185	+				-0.4
2,604,224	-				+0.1
2,604,287	+				-1.0
2,604,288	+				+0.9
2,604,324	+				-0.2
2,604,359	+				+1.5
2,604,359	+				+0.4
2,604,367	-				-2.2
2,604,372	-				-1.7
2,604,391	-		CCNA_02462	0.12	-2.2
2,604,393	+		CCNA_02462	0.12	+0.2
2,604,409	-		CCNA_02462	0.17	-1.5
2,604,424	+		CCNA_02462	0.22	-1.0
2,604,458	+		CCNA_02462	0.33	+0.4
2,604,507	-		CCNA_02462	0.48	-0.5
2,604,510	+		CCNA_02462	0.49	+0.6
2,604,518	-		CCNA_02462	0.52	-1.7
2,604,566	+		CCNA_02462	0.67	+0.8
2,604,566	+		CCNA_02462	0.67	-0.1
2,604,681	+				+1.2
2,604,748	+				-0.8
2,604,752	+				-2.1
2,604,770	-				-0.4
2,604,823	+				-0.7
2,604,875	+				+0.9
2,604,895	-				-0.1
2,604,900	+				-0.7
2,604,914	-				+1.7
2,604,927	+				-0.6
2,604,968	+				-1.6
2,604,974	-				-1.0
2,604,976	-				-0.1
2,604,992	+				-1.6
2,605,015	+				-1.1
2,605,023	-				+1.0
2,605,023	-				+0.2
2,605,035	-				+0.5
2,605,044	+				-2.0