Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02140 and CA265_RS02145 are separated by 59 nucleotides CA265_RS02145 and CA265_RS02150 are separated by 757 nucleotides
CA265_RS02140: CA265_RS02140 - glycosyl hydrolase, at 538,983 to 541,445
_RS02140
CA265_RS02145: CA265_RS02145 - 1,4-alpha-glucan branching enzyme, at 541,505 to 543,469
_RS02145
CA265_RS02150: CA265_RS02150 - hypothetical protein, at 544,227 to 546,386
_RS02150
Position (kb) 541
542
543
544 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 540.517 kb on + strand, within CA265_RS02140 at 540.581 kb on + strand, within CA265_RS02140 at 540.638 kb on - strand, within CA265_RS02140 at 540.656 kb on + strand, within CA265_RS02140 at 540.680 kb on + strand, within CA265_RS02140 at 540.734 kb on + strand, within CA265_RS02140 at 540.753 kb on + strand, within CA265_RS02140 at 540.754 kb on - strand, within CA265_RS02140 at 540.817 kb on + strand, within CA265_RS02140 at 540.891 kb on - strand, within CA265_RS02140 at 540.891 kb on - strand, within CA265_RS02140 at 540.899 kb on - strand, within CA265_RS02140 at 541.005 kb on + strand, within CA265_RS02140 at 541.006 kb on - strand, within CA265_RS02140 at 541.008 kb on - strand, within CA265_RS02140 at 541.008 kb on - strand, within CA265_RS02140 at 541.032 kb on - strand, within CA265_RS02140 at 541.087 kb on - strand, within CA265_RS02140 at 541.118 kb on - strand, within CA265_RS02140 at 541.161 kb on + strand, within CA265_RS02140 at 541.161 kb on + strand, within CA265_RS02140 at 541.162 kb on - strand, within CA265_RS02140 at 541.276 kb on - strand at 541.276 kb on - strand at 541.276 kb on - strand at 541.284 kb on - strand at 541.287 kb on + strand at 541.287 kb on + strand at 541.344 kb on - strand at 541.349 kb on + strand at 541.394 kb on - strand at 541.470 kb on + strand at 541.470 kb on + strand at 541.471 kb on - strand at 541.588 kb on - strand at 541.603 kb on + strand at 541.662 kb on + strand at 541.666 kb on + strand at 541.725 kb on + strand, within CA265_RS02145 at 541.813 kb on + strand, within CA265_RS02145 at 541.841 kb on + strand, within CA265_RS02145 at 541.842 kb on - strand, within CA265_RS02145 at 541.848 kb on - strand, within CA265_RS02145 at 541.882 kb on - strand at 542.005 kb on - strand, within CA265_RS02145 at 542.037 kb on + strand, within CA265_RS02145 at 542.037 kb on + strand, within CA265_RS02145 at 542.038 kb on - strand, within CA265_RS02145 at 542.134 kb on + strand, within CA265_RS02145 at 542.143 kb on - strand, within CA265_RS02145 at 542.197 kb on + strand, within CA265_RS02145 at 542.204 kb on + strand, within CA265_RS02145 at 542.244 kb on + strand, within CA265_RS02145 at 542.245 kb on - strand, within CA265_RS02145 at 542.245 kb on - strand, within CA265_RS02145 at 542.245 kb on - strand, within CA265_RS02145 at 542.249 kb on + strand, within CA265_RS02145 at 542.250 kb on - strand, within CA265_RS02145 at 542.337 kb on - strand, within CA265_RS02145 at 542.410 kb on + strand, within CA265_RS02145 at 542.421 kb on - strand, within CA265_RS02145 at 542.456 kb on - strand, within CA265_RS02145 at 542.472 kb on + strand, within CA265_RS02145 at 542.480 kb on + strand, within CA265_RS02145 at 542.481 kb on - strand, within CA265_RS02145 at 542.525 kb on + strand, within CA265_RS02145 at 542.598 kb on + strand, within CA265_RS02145 at 542.598 kb on + strand, within CA265_RS02145 at 542.678 kb on + strand, within CA265_RS02145 at 542.679 kb on - strand, within CA265_RS02145 at 542.700 kb on + strand at 542.702 kb on + strand, within CA265_RS02145 at 542.756 kb on - strand, within CA265_RS02145 at 542.761 kb on - strand, within CA265_RS02145 at 542.765 kb on + strand, within CA265_RS02145 at 542.766 kb on - strand, within CA265_RS02145 at 542.828 kb on + strand, within CA265_RS02145 at 542.828 kb on + strand, within CA265_RS02145 at 542.829 kb on - strand, within CA265_RS02145 at 542.902 kb on + strand, within CA265_RS02145 at 542.940 kb on + strand, within CA265_RS02145 at 543.032 kb on - strand, within CA265_RS02145 at 543.074 kb on - strand, within CA265_RS02145 at 543.103 kb on - strand, within CA265_RS02145 at 543.132 kb on + strand, within CA265_RS02145 at 543.133 kb on - strand, within CA265_RS02145 at 543.134 kb on + strand, within CA265_RS02145 at 543.135 kb on - strand, within CA265_RS02145 at 543.135 kb on - strand, within CA265_RS02145 at 543.199 kb on - strand, within CA265_RS02145 at 543.208 kb on + strand, within CA265_RS02145 at 543.235 kb on + strand, within CA265_RS02145 at 543.337 kb on + strand at 543.342 kb on + strand at 543.343 kb on - strand at 543.343 kb on - strand at 543.377 kb on - strand at 543.377 kb on - strand at 543.377 kb on - strand at 543.378 kb on + strand at 543.378 kb on + strand at 543.379 kb on - strand at 543.379 kb on - strand at 543.379 kb on - strand at 543.399 kb on - strand at 543.400 kb on + strand at 543.401 kb on - strand at 543.421 kb on - strand at 543.485 kb on - strand at 543.486 kb on + strand at 543.486 kb on + strand at 543.487 kb on - strand at 543.511 kb on + strand at 543.593 kb on - strand at 543.645 kb on + strand at 543.660 kb on + strand at 543.748 kb on + strand at 543.757 kb on + strand at 543.772 kb on + strand at 543.789 kb on + strand at 543.800 kb on + strand at 543.820 kb on + strand at 543.951 kb on - strand at 543.959 kb on + strand at 543.959 kb on + strand at 543.963 kb on + strand at 543.964 kb on - strand at 544.132 kb on - strand at 544.132 kb on - strand at 544.236 kb on + strand at 544.236 kb on + strand at 544.293 kb on + strand at 544.294 kb on - strand at 544.306 kb on + strand at 544.374 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 540,517 + CA265_RS02140 0.62 +1.5 540,581 + CA265_RS02140 0.65 -1.0 540,638 - CA265_RS02140 0.67 -0.5 540,656 + CA265_RS02140 0.68 +0.4 540,680 + CA265_RS02140 0.69 -0.8 540,734 + CA265_RS02140 0.71 -0.7 540,753 + CA265_RS02140 0.72 -2.0 540,754 - CA265_RS02140 0.72 -1.4 540,817 + CA265_RS02140 0.74 -0.9 540,891 - CA265_RS02140 0.77 -0.5 540,891 - CA265_RS02140 0.77 -1.2 540,899 - CA265_RS02140 0.78 -0.6 541,005 + CA265_RS02140 0.82 -0.0 541,006 - CA265_RS02140 0.82 -1.9 541,008 - CA265_RS02140 0.82 -0.1 541,008 - CA265_RS02140 0.82 -3.3 541,032 - CA265_RS02140 0.83 -0.6 541,087 - CA265_RS02140 0.85 -1.6 541,118 - CA265_RS02140 0.87 +0.0 541,161 + CA265_RS02140 0.88 -0.2 541,161 + CA265_RS02140 0.88 +1.7 541,162 - CA265_RS02140 0.88 -1.2 541,276 - -0.7 541,276 - -0.5 541,276 - -1.2 541,284 - -1.1 541,287 + +0.2 541,287 + +0.2 541,344 - -1.0 541,349 + +0.2 541,394 - -1.3 541,470 + -0.2 541,470 + +1.5 541,471 - -0.5 541,588 - -0.9 541,603 + -0.6 541,662 + -0.2 541,666 + +0.2 541,725 + CA265_RS02145 0.11 -1.1 541,813 + CA265_RS02145 0.16 -0.1 541,841 + CA265_RS02145 0.17 -1.9 541,842 - CA265_RS02145 0.17 -1.1 541,848 - CA265_RS02145 0.17 -0.2 541,882 - +1.4 542,005 - CA265_RS02145 0.25 -0.0 542,037 + CA265_RS02145 0.27 -0.8 542,037 + CA265_RS02145 0.27 +0.1 542,038 - CA265_RS02145 0.27 -0.5 542,134 + CA265_RS02145 0.32 -1.6 542,143 - CA265_RS02145 0.32 -0.1 542,197 + CA265_RS02145 0.35 -1.2 542,204 + CA265_RS02145 0.36 +0.1 542,244 + CA265_RS02145 0.38 +0.1 542,245 - CA265_RS02145 0.38 -0.8 542,245 - CA265_RS02145 0.38 -0.6 542,245 - CA265_RS02145 0.38 -0.3 542,249 + CA265_RS02145 0.38 -0.3 542,250 - CA265_RS02145 0.38 -0.5 542,337 - CA265_RS02145 0.42 +0.4 542,410 + CA265_RS02145 0.46 +0.1 542,421 - CA265_RS02145 0.47 -0.5 542,456 - CA265_RS02145 0.48 -1.0 542,472 + CA265_RS02145 0.49 -0.1 542,480 + CA265_RS02145 0.50 +0.4 542,481 - CA265_RS02145 0.50 -1.2 542,525 + CA265_RS02145 0.52 -1.8 542,598 + CA265_RS02145 0.56 -0.4 542,598 + CA265_RS02145 0.56 +0.4 542,678 + CA265_RS02145 0.60 -0.3 542,679 - CA265_RS02145 0.60 +0.6 542,700 + +0.6 542,702 + CA265_RS02145 0.61 -0.1 542,756 - CA265_RS02145 0.64 -1.8 542,761 - CA265_RS02145 0.64 -1.6 542,765 + CA265_RS02145 0.64 -1.4 542,766 - CA265_RS02145 0.64 -1.5 542,828 + CA265_RS02145 0.67 -0.8 542,828 + CA265_RS02145 0.67 -0.2 542,829 - CA265_RS02145 0.67 -1.8 542,902 + CA265_RS02145 0.71 -0.3 542,940 + CA265_RS02145 0.73 -1.1 543,032 - CA265_RS02145 0.78 -1.4 543,074 - CA265_RS02145 0.80 -1.7 543,103 - CA265_RS02145 0.81 +0.6 543,132 + CA265_RS02145 0.83 -0.0 543,133 - CA265_RS02145 0.83 +1.4 543,134 + CA265_RS02145 0.83 +0.5 543,135 - CA265_RS02145 0.83 -0.1 543,135 - CA265_RS02145 0.83 -0.2 543,199 - CA265_RS02145 0.86 -0.8 543,208 + CA265_RS02145 0.87 -1.0 543,235 + CA265_RS02145 0.88 -0.8 543,337 + +0.4 543,342 + -0.7 543,343 - -0.3 543,343 - -0.7 543,377 - -1.4 543,377 - +0.6 543,377 - -0.5 543,378 + +0.1 543,378 + -1.5 543,379 - -0.8 543,379 - -1.0 543,379 - -0.6 543,399 - +0.4 543,400 + -1.8 543,401 - -1.1 543,421 - -0.4 543,485 - -0.6 543,486 + -0.2 543,486 + +1.3 543,487 - +0.1 543,511 + -0.5 543,593 - +2.0 543,645 + +0.1 543,660 + -0.3 543,748 + -0.7 543,757 + +0.1 543,772 + -1.3 543,789 + -0.6 543,800 + -0.6 543,820 + -0.2 543,951 - -0.2 543,959 + -0.0 543,959 + -1.4 543,963 + -0.7 543,964 - +0.8 544,132 - +0.3 544,132 - -0.3 544,236 + -0.3 544,236 + +1.2 544,293 + -0.5 544,294 - +0.4 544,306 + -0.5 544,374 - +0.4
Or see this region's nucleotide sequence