Strain Fitness in Rhodospirillum rubrum S1H around Rru_A0044

Experiment: Hexanoic 21 mM; anaerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRru_A0043 and Rru_A0044 are separated by 36 nucleotidesRru_A0044 and Rru_A0045 are separated by 146 nucleotides Rru_A0043: Rru_A0043 - UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase, LpxD (NCBI), at 45,342 to 46,511 _A0043 Rru_A0044: Rru_A0044 - acyl carrier protein (NCBI), at 46,548 to 46,799 _A0044 Rru_A0045: Rru_A0045 - Beta-ketoacyl synthase (NCBI), at 46,946 to 48,160 _A0045 Position (kb) 46 47Strain fitness (log2 ratio) -1 0 1at 46.914 kb on + strandat 46.914 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hexanoic 21 mM; anaerobic
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46,914 + -0.4
46,914 + -0.8

Or see this region's nucleotide sequence