Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00037 and SMc00097 are separated by 28 nucleotides SMc00097 and SMc00038 are separated by 265 nucleotides
SMc00037: SMc00037 - transcriptional regulator, at 1,051,802 to 1,052,710
SMc00037
SMc00097: SMc00097 - glutathione S-transferase, at 1,052,739 to 1,053,398
SMc00097
SMc00038: SMc00038 - hypothetical protein, at 1,053,664 to 1,055,982
SMc00038
Position (kb)
1052
1053
1054 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 1051.790 kb on + strand at 1051.954 kb on + strand, within SMc00037 at 1051.955 kb on - strand, within SMc00037 at 1052.400 kb on + strand, within SMc00037 at 1052.400 kb on + strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.434 kb on + strand, within SMc00037 at 1052.435 kb on - strand, within SMc00037 at 1052.597 kb on + strand, within SMc00037 at 1052.698 kb on + strand at 1052.860 kb on + strand, within SMc00097 at 1052.897 kb on + strand, within SMc00097 at 1052.918 kb on - strand, within SMc00097 at 1053.036 kb on + strand, within SMc00097 at 1053.037 kb on - strand, within SMc00097 at 1053.155 kb on - strand, within SMc00097 at 1053.352 kb on + strand at 1053.385 kb on + strand at 1053.385 kb on + strand at 1053.385 kb on + strand at 1053.385 kb on + strand at 1053.386 kb on - strand at 1053.386 kb on - strand at 1053.419 kb on - strand at 1053.419 kb on - strand at 1053.432 kb on + strand at 1053.432 kb on + strand at 1053.432 kb on + strand at 1053.433 kb on - strand at 1053.472 kb on + strand at 1053.487 kb on + strand at 1053.487 kb on + strand at 1053.487 kb on + strand at 1053.487 kb on + strand at 1053.488 kb on - strand at 1053.494 kb on + strand at 1053.533 kb on + strand at 1053.534 kb on - strand at 1053.534 kb on - strand at 1053.613 kb on + strand at 1053.613 kb on + strand at 1053.815 kb on - strand at 1053.851 kb on - strand at 1053.851 kb on - strand at 1053.852 kb on + strand at 1053.852 kb on + strand at 1053.852 kb on + strand at 1053.852 kb on + strand at 1053.852 kb on + strand at 1053.852 kb on + strand at 1053.853 kb on - strand at 1053.853 kb on - strand at 1053.853 kb on - strand at 1053.856 kb on + strand at 1053.856 kb on + strand at 1053.856 kb on + strand at 1053.857 kb on - strand at 1053.857 kb on - strand at 1053.857 kb on - strand at 1053.857 kb on - strand at 1053.857 kb on - strand at 1053.857 kb on - strand at 1053.868 kb on - strand at 1053.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,051,790 + -0.5 1,051,954 + SMc00037 0.17 +0.2 1,051,955 - SMc00037 0.17 +1.2 1,052,400 + SMc00037 0.66 -0.3 1,052,400 + SMc00037 0.66 +0.6 1,052,401 - SMc00037 0.66 -0.8 1,052,401 - SMc00037 0.66 +0.9 1,052,401 - SMc00037 0.66 -0.1 1,052,401 - SMc00037 0.66 +0.6 1,052,401 - SMc00037 0.66 +0.9 1,052,401 - SMc00037 0.66 +1.1 1,052,434 + SMc00037 0.70 +0.8 1,052,435 - SMc00037 0.70 +0.5 1,052,597 + SMc00037 0.87 +0.2 1,052,698 + -0.5 1,052,860 + SMc00097 0.18 -0.3 1,052,897 + SMc00097 0.24 +0.2 1,052,918 - SMc00097 0.27 -1.1 1,053,036 + SMc00097 0.45 +0.1 1,053,037 - SMc00097 0.45 +0.2 1,053,155 - SMc00097 0.63 +0.6 1,053,352 + +0.1 1,053,385 + -1.2 1,053,385 + -0.4 1,053,385 + +0.8 1,053,385 + -1.5 1,053,386 - +2.7 1,053,386 - -0.2 1,053,419 - -0.1 1,053,419 - -0.2 1,053,432 + +3.5 1,053,432 + +1.8 1,053,432 + +0.4 1,053,433 - -0.4 1,053,472 + -0.3 1,053,487 + +1.8 1,053,487 + +0.0 1,053,487 + +0.6 1,053,487 + -0.7 1,053,488 - -1.5 1,053,494 + -0.4 1,053,533 + +0.5 1,053,534 - -0.3 1,053,534 - +0.6 1,053,613 + +0.1 1,053,613 + -1.1 1,053,815 - -0.1 1,053,851 - +0.7 1,053,851 - -0.4 1,053,852 + -0.7 1,053,852 + +1.0 1,053,852 + +2.1 1,053,852 + -0.8 1,053,852 + +0.9 1,053,852 + -0.7 1,053,853 - -0.7 1,053,853 - +0.1 1,053,853 - +0.4 1,053,856 + +0.8 1,053,856 + +1.6 1,053,856 + +0.2 1,053,857 - +0.5 1,053,857 - +3.9 1,053,857 - +2.0 1,053,857 - +0.2 1,053,857 - +1.2 1,053,857 - -1.2 1,053,868 - +0.2 1,053,868 - +0.1
Or see this region's nucleotide sequence