Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00035 and SMc00036 are separated by 90 nucleotides SMc00036 and SMc00037 are separated by 387 nucleotides
SMc00035: SMc00035 - hypothetical protein, at 1,049,693 to 1,050,703
SMc00035
SMc00036: SMc00036 - glutathione S-transferase, at 1,050,794 to 1,051,414
SMc00036
SMc00037: SMc00037 - transcriptional regulator, at 1,051,802 to 1,052,710
SMc00037
Position (kb)
1050
1051
1052 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1050.155 kb on + strand, within SMc00035 at 1050.156 kb on - strand, within SMc00035 at 1050.156 kb on - strand, within SMc00035 at 1050.156 kb on - strand, within SMc00035 at 1050.156 kb on - strand, within SMc00035 at 1050.165 kb on - strand, within SMc00035 at 1050.269 kb on + strand, within SMc00035 at 1050.269 kb on + strand, within SMc00035 at 1050.269 kb on + strand, within SMc00035 at 1050.477 kb on + strand, within SMc00035 at 1050.477 kb on + strand, within SMc00035 at 1050.478 kb on - strand, within SMc00035 at 1050.478 kb on - strand, within SMc00035 at 1050.478 kb on - strand, within SMc00035 at 1050.809 kb on + strand at 1050.811 kb on + strand at 1050.870 kb on - strand, within SMc00036 at 1050.920 kb on + strand, within SMc00036 at 1051.004 kb on + strand, within SMc00036 at 1051.005 kb on - strand, within SMc00036 at 1051.005 kb on - strand, within SMc00036 at 1051.006 kb on + strand, within SMc00036 at 1051.007 kb on - strand, within SMc00036 at 1051.088 kb on + strand, within SMc00036 at 1051.088 kb on + strand, within SMc00036 at 1051.088 kb on + strand, within SMc00036 at 1051.088 kb on + strand, within SMc00036 at 1051.088 kb on + strand, within SMc00036 at 1051.088 kb on + strand, within SMc00036 at 1051.088 kb on + strand, within SMc00036 at 1051.089 kb on - strand, within SMc00036 at 1051.195 kb on + strand, within SMc00036 at 1051.195 kb on + strand, within SMc00036 at 1051.280 kb on + strand, within SMc00036 at 1051.281 kb on - strand, within SMc00036 at 1051.467 kb on - strand at 1051.790 kb on + strand at 1051.954 kb on + strand, within SMc00037 at 1051.955 kb on - strand, within SMc00037 at 1052.400 kb on + strand, within SMc00037 at 1052.400 kb on + strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037 at 1052.401 kb on - strand, within SMc00037
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,050,155 + SMc00035 0.46 +0.6 1,050,156 - SMc00035 0.46 +0.6 1,050,156 - SMc00035 0.46 -3.2 1,050,156 - SMc00035 0.46 +0.8 1,050,156 - SMc00035 0.46 +0.0 1,050,165 - SMc00035 0.47 +1.6 1,050,269 + SMc00035 0.57 +0.2 1,050,269 + SMc00035 0.57 -0.3 1,050,269 + SMc00035 0.57 -1.2 1,050,477 + SMc00035 0.78 +0.5 1,050,477 + SMc00035 0.78 +0.2 1,050,478 - SMc00035 0.78 +0.1 1,050,478 - SMc00035 0.78 +0.4 1,050,478 - SMc00035 0.78 +0.1 1,050,809 + -1.9 1,050,811 + -0.2 1,050,870 - SMc00036 0.12 -0.4 1,050,920 + SMc00036 0.20 -1.7 1,051,004 + SMc00036 0.34 -3.6 1,051,005 - SMc00036 0.34 +1.5 1,051,005 - SMc00036 0.34 +2.8 1,051,006 + SMc00036 0.34 +0.0 1,051,007 - SMc00036 0.34 +0.4 1,051,088 + SMc00036 0.47 -0.2 1,051,088 + SMc00036 0.47 -0.2 1,051,088 + SMc00036 0.47 +0.1 1,051,088 + SMc00036 0.47 +0.5 1,051,088 + SMc00036 0.47 +1.2 1,051,088 + SMc00036 0.47 -0.0 1,051,088 + SMc00036 0.47 +0.3 1,051,089 - SMc00036 0.48 -0.0 1,051,195 + SMc00036 0.65 -0.6 1,051,195 + SMc00036 0.65 +0.8 1,051,280 + SMc00036 0.78 -0.3 1,051,281 - SMc00036 0.78 -3.1 1,051,467 - +0.0 1,051,790 + -0.5 1,051,954 + SMc00037 0.17 +0.2 1,051,955 - SMc00037 0.17 +1.2 1,052,400 + SMc00037 0.66 -0.3 1,052,400 + SMc00037 0.66 +0.6 1,052,401 - SMc00037 0.66 -0.8 1,052,401 - SMc00037 0.66 +0.9 1,052,401 - SMc00037 0.66 -0.1 1,052,401 - SMc00037 0.66 +0.6 1,052,401 - SMc00037 0.66 +0.9 1,052,401 - SMc00037 0.66 +1.1
Or see this region's nucleotide sequence