Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0723 and SMa0726 are separated by 589 nucleotides SMa0726 and SMa0728 are separated by 421 nucleotides SMa0728 and SMa0731 are separated by 340 nucleotides
SMa0723: SMa0723 - hypothetical protein, at 392,499 to 393,287
SMa0723
SMa0726: SMa0726 - hypothetical protein, at 393,877 to 394,269
SMa0726
SMa0728: SMa0728 - hypothetical protein, at 394,691 to 394,891
SMa0728
SMa0731: SMa0731 - hypothetical protein, at 395,232 to 395,579
SMa0731
Position (kb) 393
394
395 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 392.907 kb on + strand, within SMa0723 at 392.908 kb on - strand, within SMa0723 at 393.190 kb on - strand, within SMa0723 at 393.190 kb on - strand, within SMa0723 at 393.199 kb on - strand, within SMa0723 at 393.353 kb on + strand at 393.353 kb on + strand at 393.490 kb on - strand at 393.585 kb on + strand at 393.585 kb on + strand at 393.634 kb on + strand at 393.636 kb on + strand at 393.636 kb on + strand at 393.637 kb on - strand at 393.637 kb on - strand at 393.795 kb on + strand at 393.796 kb on - strand at 393.810 kb on + strand at 393.811 kb on - strand at 393.811 kb on - strand at 393.864 kb on + strand at 393.864 kb on + strand at 393.864 kb on + strand at 393.898 kb on + strand at 393.932 kb on + strand, within SMa0726 at 393.932 kb on + strand, within SMa0726 at 393.933 kb on - strand, within SMa0726 at 393.974 kb on - strand, within SMa0726 at 393.999 kb on + strand, within SMa0726 at 394.000 kb on - strand, within SMa0726 at 394.000 kb on - strand, within SMa0726 at 394.012 kb on + strand, within SMa0726 at 394.012 kb on + strand, within SMa0726 at 394.041 kb on + strand, within SMa0726 at 394.041 kb on + strand, within SMa0726 at 394.042 kb on - strand, within SMa0726 at 394.143 kb on + strand, within SMa0726 at 394.144 kb on - strand, within SMa0726 at 394.144 kb on - strand, within SMa0726 at 394.268 kb on - strand at 394.337 kb on - strand at 394.359 kb on + strand at 394.388 kb on + strand at 394.395 kb on - strand at 394.395 kb on - strand at 394.441 kb on - strand at 394.441 kb on - strand at 394.480 kb on - strand at 394.596 kb on - strand at 394.671 kb on - strand at 394.671 kb on - strand at 394.699 kb on - strand at 394.752 kb on - strand, within SMa0728 at 394.796 kb on - strand, within SMa0728 at 394.796 kb on - strand, within SMa0728 at 394.863 kb on + strand, within SMa0728 at 394.889 kb on + strand at 394.905 kb on + strand at 394.906 kb on - strand at 394.986 kb on + strand at 395.030 kb on + strand at 395.034 kb on + strand at 395.035 kb on - strand at 395.057 kb on - strand at 395.057 kb on - strand at 395.117 kb on + strand at 395.117 kb on + strand at 395.118 kb on - strand at 395.118 kb on - strand at 395.118 kb on - strand at 395.268 kb on + strand, within SMa0731 at 395.268 kb on + strand, within SMa0731 at 395.268 kb on + strand, within SMa0731 at 395.269 kb on - strand, within SMa0731
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 392,907 + SMa0723 0.52 -0.2 392,908 - SMa0723 0.52 -0.0 393,190 - SMa0723 0.88 +0.7 393,190 - SMa0723 0.88 +0.1 393,199 - SMa0723 0.89 +0.7 393,353 + -1.4 393,353 + -0.6 393,490 - -0.1 393,585 + -0.5 393,585 + +0.2 393,634 + +0.0 393,636 + -0.5 393,636 + +0.1 393,637 - -0.6 393,637 - +0.0 393,795 + +0.8 393,796 - -1.1 393,810 + -2.6 393,811 - +0.0 393,811 - +1.7 393,864 + -0.0 393,864 + -1.1 393,864 + -0.5 393,898 + +0.0 393,932 + SMa0726 0.14 -1.0 393,932 + SMa0726 0.14 +0.2 393,933 - SMa0726 0.14 -0.4 393,974 - SMa0726 0.25 -0.1 393,999 + SMa0726 0.31 +1.4 394,000 - SMa0726 0.31 -0.1 394,000 - SMa0726 0.31 +0.5 394,012 + SMa0726 0.34 -0.1 394,012 + SMa0726 0.34 +0.8 394,041 + SMa0726 0.42 -0.7 394,041 + SMa0726 0.42 +0.8 394,042 - SMa0726 0.42 +1.7 394,143 + SMa0726 0.68 -0.0 394,144 - SMa0726 0.68 +0.7 394,144 - SMa0726 0.68 +1.6 394,268 - +1.7 394,337 - +1.1 394,359 + -0.4 394,388 + -1.4 394,395 - -0.2 394,395 - -0.5 394,441 - -0.1 394,441 - +1.0 394,480 - -1.4 394,596 - -2.4 394,671 - -0.4 394,671 - -0.4 394,699 - +0.2 394,752 - SMa0728 0.30 -0.1 394,796 - SMa0728 0.52 -0.8 394,796 - SMa0728 0.52 -0.1 394,863 + SMa0728 0.86 -0.1 394,889 + +0.4 394,905 + -0.1 394,906 - +0.1 394,986 + -1.6 395,030 + +1.6 395,034 + -0.4 395,035 - -3.2 395,057 - -1.3 395,057 - -0.7 395,117 + +1.5 395,117 + +0.2 395,118 - -0.8 395,118 - +1.3 395,118 - +0.9 395,268 + SMa0731 0.10 +0.4 395,268 + SMa0731 0.10 -0.7 395,268 + SMa0731 0.10 +0.2 395,269 - SMa0731 0.11 +1.3
Or see this region's nucleotide sequence