Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21522 and SM_b21523 overlap by 4 nucleotides SM_b21523 and SM_b21524 are separated by 97 nucleotides SM_b21524 and SM_b20647 are separated by 296 nucleotides SM_b20647 and SM_b20648 are separated by 439 nucleotides
SM_b21522: SM_b21522 - cell division topological specificity factor MinE, at 1,446,108 to 1,446,371
_b21522
SM_b21523: SM_b21523 - cell division inhibitor protein, at 1,446,368 to 1,447,183
_b21523
SM_b21524: SM_b21524 - septum formation inhibitor, at 1,447,281 to 1,448,030
_b21524
SM_b20647: SM_b20647 - hypothetical protein, at 1,448,327 to 1,448,578
_b20647
SM_b20648: SM_b20648 - oxidoreductase, at 1,449,018 to 1,450,055
_b20648
Position (kb)
1447
1448
1449 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1446.390 kb on - strand at 1446.471 kb on + strand, within SM_b21523 at 1446.642 kb on + strand, within SM_b21523 at 1446.643 kb on - strand, within SM_b21523 at 1447.011 kb on + strand, within SM_b21523 at 1447.012 kb on - strand, within SM_b21523 at 1447.166 kb on + strand at 1447.167 kb on - strand at 1447.172 kb on + strand at 1447.253 kb on - strand at 1447.376 kb on - strand, within SM_b21524 at 1447.484 kb on + strand, within SM_b21524 at 1447.485 kb on - strand, within SM_b21524 at 1448.041 kb on + strand at 1448.041 kb on + strand at 1448.058 kb on + strand at 1448.206 kb on - strand at 1448.347 kb on + strand at 1448.366 kb on + strand, within SM_b20647 at 1448.366 kb on + strand, within SM_b20647 at 1448.366 kb on + strand, within SM_b20647 at 1448.367 kb on - strand, within SM_b20647 at 1448.367 kb on - strand, within SM_b20647 at 1448.367 kb on - strand, within SM_b20647 at 1448.367 kb on - strand, within SM_b20647 at 1448.830 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,446,390 - +0.1 1,446,471 + SM_b21523 0.13 -0.4 1,446,642 + SM_b21523 0.34 -1.3 1,446,643 - SM_b21523 0.34 +0.7 1,447,011 + SM_b21523 0.79 +1.5 1,447,012 - SM_b21523 0.79 -0.9 1,447,166 + +2.0 1,447,167 - -0.3 1,447,172 + -0.1 1,447,253 - -0.5 1,447,376 - SM_b21524 0.13 -2.3 1,447,484 + SM_b21524 0.27 -1.8 1,447,485 - SM_b21524 0.27 -2.0 1,448,041 + +0.2 1,448,041 + -0.3 1,448,058 + -0.3 1,448,206 - +0.8 1,448,347 + -0.5 1,448,366 + SM_b20647 0.15 -2.0 1,448,366 + SM_b20647 0.15 +0.7 1,448,366 + SM_b20647 0.15 +0.6 1,448,367 - SM_b20647 0.16 +0.2 1,448,367 - SM_b20647 0.16 -0.2 1,448,367 - SM_b20647 0.16 -0.8 1,448,367 - SM_b20647 0.16 -0.5 1,448,830 + +0.7
Or see this region's nucleotide sequence